MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_CP128218 Location: 1034367..1056041 Organism: Escherichia coli strain TG1 Replicon: chromosome
Accession: NZ_CP128218 Location: 1034367..1056041 Organism: Escherichia coli strain TG1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QSI84_RS05135 (1030356) | 1030356..1030403 | + | 48 | WP_211180494.1 | protein YnaN | - |
| QSI84_RS05140 (1030417) | 1030417..1031400 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| QSI84_RS05145 (1031675) | 1031675..1031848 | + | 174 | WP_001296046.1 | protein YnaL | - |
| QSI84_RS05150 (1031878) | 1031878..1033251 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| QSI84_RS05155 (1033380) | 1033380..1034315 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| QSI84_RS05160 (1034367) | 1034367..1035602 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QSI84_RS05165 (1035604) | 1035604..1035819 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1035923) | 1035923..1036101 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1035923) | 1035923..1036101 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1035923) | 1035923..1036101 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1035923) | 1035923..1036101 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| QSI84_RS05170 (1035898) | 1035898..1036107 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| QSI84_RS05175 (1036100) | 1036100..1036294 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| QSI84_RS05180 (1036351) | 1036351..1037160 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| QSI84_RS05185 (1037153) | 1037153..1039753 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| QSI84_RS05190 (1039855) | 1039855..1040130 | - | 276 | WP_000632297.1 | protein RacC | - |
| QSI84_RS05195 (1040205) | 1040205..1040375 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| QSI84_RS05200 (1040375) | 1040375..1040596 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| QSI84_RS05205 (1041038) | 1041038..1041526 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| QSI84_RS05210 (1041523) | 1041523..1041678 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| QSI84_RS05215 (1041689) | 1041689..1041823 | - | 135 | WP_000233809.1 | phage protein | - |
| QSI84_RS05220 (1042132) | 1042132..1042608 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| QSI84_RS05225 (1042732) | 1042732..1043028 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| QSI84_RS05230 (1043051) | 1043051..1043473 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| QSI84_RS05235 (1043486) | 1043486..1044343 | + | 858 | WP_000899748.1 | YdaU family protein | - |
| QSI84_RS05240 (1044350) | 1044350..1045096 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| QSI84_RS05245 (1045119) | 1045119..1045571 | + | 453 | Protein_1019 | DUF1627 domain-containing protein | - |
| QSI84_RS05250 (1045767) | 1045767..1045952 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| QSI84_RS05255 (1046149) | 1046149..1047606 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| QSI84_RS05260 (1047744) | 1047744..1048007 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| QSI84_RS05265 (1047988) | 1047988..1048347 | + | 360 | WP_000091628.1 | protein YdaY | - |
| QSI84_RS05270 (1048821) | 1048821..1049753 | + | 933 | Protein_1024 | phage tail length tape measure family protein | - |
| QSI84_RS05275 (1049756) | 1049756..1049971 | + | 216 | Protein_1025 | Ail/Lom family outer membrane beta-barrel protein | - |
| QSI84_RS05280 (1050113) | 1050113..1051093 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| QSI84_RS05285 (1051163) | 1051163..1051351 | + | 189 | Protein_1027 | Ail/Lom family outer membrane beta-barrel protein | - |
| QSI84_RS05290 (1051416) | 1051416..1054778 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QSI84_RS05295 (1054778) | 1054778..1055353 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| QSI84_RS05300 (1055451) | 1055451..1056041 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QSI84_RS05305 (1056358) | 1056358..1056591 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| QSI84_RS05310 (1056660) | 1056660..1056773 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QSI84_RS05315 (1057552) | 1057552..1057986 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| QSI84_RS05320 (1058127) | 1058127..1059260 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |