MGE detailed information
MGE type: Prophage MGE length: 56530 bp
Accession: NZ_CP127019 Location: 2160352..2216881 Organism: Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-009_371M Replicon: chromosome
Accession: NZ_CP127019 Location: 2160352..2216881 Organism: Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-009_371M Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQO11_RS10835 (2156537) | 2156537..2158591 | - | 2055 | WP_000669720.1 | extracellular adherence protein Eap/Map | - |
| QQO11_RS10840 (2158980) | 2158980..2159177 | + | 198 | WP_000239610.1 | phospholipase | - |
| QQO11_RS10845 (2159549) | 2159549..2159728 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| QQO11_RS10850 (2160039) | 2160039..2160299 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| QQO11_RS10855 (2160352) | 2160352..2160702 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| QQO11_RS10860 (2161213) | 2161213..2161548 | - | 336 | Protein_2105 | SH3 domain-containing protein | - |
| QQO11_RS10865 (2162199) | 2162199..2162690 | - | 492 | WP_000920038.1 | Staphylokinase | VF |
| QQO11_RS10870 (2162881) | 2162881..2163636 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| QQO11_RS10875 (2163648) | 2163648..2163902 | - | 255 | WP_000611512.1 | phage holin | - |
| QQO11_RS10880 (2163954) | 2163954..2164061 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - (2163983) | 2163983..2164122 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (2163983) | 2163983..2164122 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (2163983) | 2163983..2164122 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (2163983) | 2163983..2164122 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| QQO11_RS10885 (2164114) | 2164114..2164248 | - | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| QQO11_RS10890 (2164399) | 2164399..2165172 | - | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| QQO11_RS10895 (2165545) | 2165545..2165919 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| QQO11_RS10900 (2165975) | 2165975..2166262 | - | 288 | WP_285236782.1 | hypothetical protein | - |
| QQO11_RS10905 (2166308) | 2166308..2166460 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| QQO11_RS10910 (2166453) | 2166453..2170235 | - | 3783 | WP_000582129.1 | phage tail spike protein | - |
| QQO11_RS10915 (2170251) | 2170251..2171741 | - | 1491 | WP_001154317.1 | phage tail family protein | - |
| QQO11_RS10920 (2171741) | 2171741..2176390 | - | 4650 | WP_001133523.1 | phage tail tape measure protein | - |
| QQO11_RS10925 (2176446) | 2176446..2176568 | - | 123 | WP_000571956.1 | hypothetical protein | - |
| QQO11_RS10930 (2176628) | 2176628..2177074 | - | 447 | WP_000442605.1 | hypothetical protein | - |
| QQO11_RS10935 (2177141) | 2177141..2178094 | - | 954 | WP_000570648.1 | Ig-like domain-containing protein | - |
| QQO11_RS10940 (2178095) | 2178095..2178475 | - | 381 | WP_000608371.1 | hypothetical protein | - |
| QQO11_RS10945 (2178472) | 2178472..2178849 | - | 378 | WP_000501242.1 | HK97 gp10 family phage protein | - |
| QQO11_RS10950 (2178849) | 2178849..2179184 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| QQO11_RS10955 (2179171) | 2179171..2179503 | - | 333 | WP_001177483.1 | head-tail connector protein | - |
| QQO11_RS10960 (2179512) | 2179512..2179670 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| QQO11_RS10965 (2179706) | 2179706..2180953 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| QQO11_RS10970 (2181041) | 2181041..2181625 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| QQO11_RS10975 (2181618) | 2181618..2182868 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| QQO11_RS10980 (2182874) | 2182874..2183074 | - | 201 | WP_000365299.1 | hypothetical protein | - |
| QQO11_RS10985 (2183088) | 2183088..2184782 | - | 1695 | WP_000133304.1 | phage terminase family protein | - |
| QQO11_RS10990 (2184785) | 2184785..2185252 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| QQO11_RS10995 (2185381) | 2185381..2185725 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| QQO11_RS11000 (2185741) | 2185741..2186193 | - | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| QQO11_RS11005 (2186308) | 2186308..2186778 | - | 471 | WP_000282755.1 | hypothetical protein | - |
| QQO11_RS11010 (2186801) | 2186801..2187001 | - | 201 | WP_001570807.1 | DUF1514 family protein | - |
| QQO11_RS11015 (2187001) | 2187001..2187126 | - | 126 | WP_031783376.1 | transcriptional regulator | - |
| QQO11_RS11020 (2187119) | 2187119..2187322 | - | 204 | WP_001072793.1 | hypothetical protein | - |
| QQO11_RS11025 (2187323) | 2187323..2187514 | - | 192 | Protein_2138 | hypothetical protein | - |
| QQO11_RS11030 (2187511) | 2187511..2187717 | - | 207 | WP_000195826.1 | DUF1381 domain-containing protein | - |
| QQO11_RS11035 (2187754) | 2187754..2188287 | - | 534 | WP_025920701.1 | dUTP diphosphatase | - |
| QQO11_RS11040 (2188302) | 2188302..2188463 | - | 162 | WP_000889683.1 | hypothetical protein | - |
| QQO11_RS11045 (2188464) | 2188464..2188745 | - | 282 | WP_000454994.1 | hypothetical protein | - |
| QQO11_RS11050 (2188746) | 2188746..2188919 | - | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| QQO11_RS11055 (2188909) | 2188909..2189160 | - | 252 | WP_025174939.1 | DUF1024 family protein | Toxin Detail |
| QQO11_RS11060 (2189175) | 2189175..2189417 | - | 243 | WP_000131381.1 | phi PVL orf 51-like protein | - |
| QQO11_RS11065 (2189421) | 2189421..2189791 | - | 371 | Protein_2146 | SA1788 family PVL leukocidin-associated protein | - |
| QQO11_RS11070 (2189804) | 2189804..2190208 | - | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QQO11_RS11075 (2190217) | 2190217..2190435 | - | 219 | WP_000338527.1 | hypothetical protein | - |
| QQO11_RS11080 (2190442) | 2190442..2191335 | - | 894 | WP_000148335.1 | DnaD domain-containing protein | - |
| QQO11_RS11085 (2191365) | 2191365..2191835 | - | 471 | WP_000934760.1 | single-stranded DNA-binding protein | - |
| QQO11_RS11090 (2191836) | 2191836..2192453 | - | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| QQO11_RS11095 (2192534) | 2192534..2193454 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| QQO11_RS11100 (2193456) | 2193456..2195400 | - | 1945 | Protein_2153 | AAA family ATPase | - |
| QQO11_RS11105 (2195409) | 2195409..2195672 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| QQO11_RS11110 (2195681) | 2195681..2195941 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| QQO11_RS11115 (2196034) | 2196034..2196195 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| QQO11_RS11120 (2196192) | 2196192..2196512 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| QQO11_RS11125 (2196571) | 2196571..2197203 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| QQO11_RS11130 (2197218) | 2197218..2197358 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| QQO11_RS11135 (2197389) | 2197389..2197586 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| QQO11_RS11140 (2197602) | 2197602..2198351 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| QQO11_RS11145 (2198408) | 2198408..2198947 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| QQO11_RS11150 (2198971) | 2198971..2199231 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| QQO11_RS11155 (2199249) | 2199249..2199473 | - | 225 | WP_000338185.1 | DUF739 family protein | - |
| QQO11_RS11160 (2199632) | 2199632..2200402 | + | 771 | WP_031783378.1 | S24 family peptidase | - |
| QQO11_RS11165 (2200602) | 2200602..2200784 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| QQO11_RS11170 (2200820) | 2200820..2200966 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| QQO11_RS11175 (2200963) | 2200963..2201577 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| QQO11_RS11180 (2201685) | 2201685..2202722 | + | 1038 | WP_000857176.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QQO11_RS11185 (2202773) | 2202773..2203603 | + | 831 | Protein_2170 | Phospholipase C | VF |
| QQO11_RS11190 (2203841) | 2203841..2204857 | - | 1017 | WP_000595324.1 | putative leukocidin-like protein 1 | VF |
| QQO11_RS11195 (2204879) | 2204879..2205934 | - | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| QQO11_RS11200 (2206369) | 2206369..2207592 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| QQO11_RS11205 (2207964) | 2207964..2208807 | - | 844 | Protein_2174 | class I SAM-dependent methyltransferase | - |
| QQO11_RS11210 (2208869) | 2208869..2209780 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| QQO11_RS11215 (2209920) | 2209920..2211248 | + | 1329 | WP_108630811.1 | TrkH family potassium uptake protein | - |
| QQO11_RS11220 (2212101) | 2212101..2212544 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| QQO11_RS11225 (2212650) | 2212650..2213086 | - | 437 | Protein_2178 | hypothetical protein | - |
| QQO11_RS11230 (2213404) | 2213404..2213994 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| QQO11_RS11235 (2213991) | 2213991..2214203 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| QQO11_RS11240 (2214264) | 2214264..2214810 | + | 547 | Protein_2181 | site-specific integrase | - |
| QQO11_RS11245 (2214905) | 2214905..2216521 | - | 1617 | WP_000240653.1 | 60 kDa chaperonin | VF |
| QQO11_RS11250 (2216597) | 2216597..2216881 | - | 285 | WP_000917288.1 | co-chaperone GroES | - |
| QQO11_RS11255 (2217056) | 2217056..2217799 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease MroQ | - |
| QQO11_RS11260 (2217823) | 2217823..2218965 | - | 1143 | WP_000120309.1 | SdrH family protein | - |
| QQO11_RS11265 (2219162) | 2219162..2219788 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| QQO11_RS11270 (2220149) | 2220149..2220934 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| QQO11_RS11275 (2221531) | 2221531..2221665 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0.009 |