MGE detailed information
MGE type: Prophage MGE length: 57011 bp
Accession: NZ_CP125897 Location: 2019026..2076036 Organism: Staphylococcus aureus strain CHAL4 Replicon: chromosome
Accession: NZ_CP125897 Location: 2019026..2076036 Organism: Staphylococcus aureus strain CHAL4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QM341_RS10045 (2015209) | 2015209..2015445 | - | 237 | WP_001822934.1 | MAP domain-containing protein | - |
| QM341_RS10050 (2015510) | 2015510..2015812 | - | 303 | WP_223200726.1 | MAP domain-containing protein | - |
| QM341_RS10055 (2015837) | 2015837..2017264 | - | 1428 | Protein_1942 | extracellular adherence protein Eap/Map | - |
| QM341_RS10060 (2017654) | 2017654..2017851 | + | 198 | WP_000239610.1 | phospholipase | - |
| QM341_RS10065 (2018223) | 2018223..2018402 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| QM341_RS10070 (2018713) | 2018713..2018973 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| QM341_RS10075 (2019026) | 2019026..2019376 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| QM341_RS10080 (2019886) | 2019886..2020221 | - | 336 | Protein_1947 | SH3 domain-containing protein | - |
| QM341_RS10085 (2020872) | 2020872..2021363 | - | 492 | WP_000920038.1 | Staphylokinase | VF |
| QM341_RS10090 (2021554) | 2021554..2022309 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| QM341_RS10095 (2022321) | 2022321..2022575 | - | 255 | WP_000611512.1 | phage holin | - |
| QM341_RS10100 (2022627) | 2022627..2022734 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - (2022656) | 2022656..2022795 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (2022656) | 2022656..2022795 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (2022656) | 2022656..2022795 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (2022656) | 2022656..2022795 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| QM341_RS10105 (2022787) | 2022787..2022963 | - | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| QM341_RS10110 (2023072) | 2023072..2023845 | - | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| QM341_RS10115 (2024218) | 2024218..2024592 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| QM341_RS10120 (2024648) | 2024648..2024935 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| QM341_RS10125 (2024981) | 2024981..2025133 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| QM341_RS10130 (2025126) | 2025126..2028908 | - | 3783 | WP_283486969.1 | phage tail spike protein | - |
| QM341_RS10135 (2028924) | 2028924..2030408 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| QM341_RS10140 (2030405) | 2030405..2034934 | - | 4530 | WP_045188983.1 | phage tail tape measure protein | - |
| QM341_RS10145 (2034991) | 2034991..2035128 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| QM341_RS10150 (2035179) | 2035179..2035529 | - | 351 | WP_283486971.1 | hypothetical protein | - |
| QM341_RS10155 (2035579) | 2035579..2035809 | - | 231 | Protein_1962 | Ig-like domain-containing protein | - |
| QM341_RS10160 (2035845) | 2035845..2036489 | - | 645 | WP_000268741.1 | phage tail protein | - |
| QM341_RS10165 (2036490) | 2036490..2036897 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| QM341_RS10170 (2036894) | 2036894..2037298 | - | 405 | WP_000114225.1 | HK97 gp10 family phage protein | - |
| QM341_RS10175 (2037295) | 2037295..2037657 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| QM341_RS10180 (2037641) | 2037641..2037925 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| QM341_RS10185 (2037915) | 2037915..2038199 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| QM341_RS10190 (2038219) | 2038219..2039364 | - | 1146 | WP_000154555.1 | phage major capsid protein | - |
| QM341_RS10195 (2039388) | 2039388..2040125 | - | 738 | WP_031782784.1 | Clp protease ClpP | - |
| QM341_RS10200 (2040109) | 2040109..2041296 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| QM341_RS10205 (2041312) | 2041312..2042973 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| QM341_RS10210 (2042970) | 2042970..2043314 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| QM341_RS10215 (2043445) | 2043445..2043744 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| QM341_RS10220 (2043976) | 2043976..2044392 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| QM341_RS10225 (2044420) | 2044420..2044620 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| QM341_RS10230 (2044620) | 2044620..2044769 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| QM341_RS10235 (2044766) | 2044766..2045152 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| QM341_RS10240 (2045149) | 2045149..2045355 | - | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| QM341_RS10245 (2045392) | 2045392..2045928 | - | 537 | WP_001066444.1 | dUTPase | - |
| QM341_RS10250 (2045921) | 2045921..2046331 | - | 411 | WP_000197967.1 | hypothetical protein | - |
| QM341_RS10255 (2046328) | 2046328..2046837 | - | 510 | WP_001105598.1 | hypothetical protein | - |
| QM341_RS10260 (2046834) | 2046834..2047283 | - | 450 | WP_000982711.1 | YopX family protein | - |
| QM341_RS10265 (2047348) | 2047348..2047590 | - | 243 | WP_000131366.1 | SAV1978 family virulence-associated passenger protein | - |
| QM341_RS10270 (2047594) | 2047594..2047962 | - | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| QM341_RS10275 (2047975) | 2047975..2048379 | - | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QM341_RS10280 (2048388) | 2048388..2048606 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| QM341_RS10285 (2048613) | 2048613..2049497 | - | 885 | WP_000148316.1 | DnaD domain protein | - |
| QM341_RS10290 (2049527) | 2049527..2049997 | - | 471 | WP_000934764.1 | single-stranded DNA-binding protein | - |
| QM341_RS10295 (2049998) | 2049998..2050615 | - | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| QM341_RS10300 (2050696) | 2050696..2051616 | - | 921 | WP_000138472.1 | recombinase RecT | - |
| QM341_RS10305 (2051618) | 2051618..2053561 | - | 1944 | WP_045189013.1 | AAA family ATPase | - |
| QM341_RS10310 (2053570) | 2053570..2053833 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| QM341_RS10315 (2053842) | 2053842..2054102 | - | 261 | WP_000291503.1 | DUF1108 family protein | - |
| QM341_RS10320 (2054083) | 2054083..2054409 | - | 327 | WP_000165375.1 | DUF2482 family protein | - |
| QM341_RS10325 (2054504) | 2054504..2054665 | - | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| QM341_RS10330 (2054662) | 2054662..2054982 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| QM341_RS10335 (2055041) | 2055041..2055673 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| QM341_RS10340 (2055688) | 2055688..2055828 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| QM341_RS10345 (2055859) | 2055859..2056056 | - | 198 | WP_001148855.1 | hypothetical protein | - |
| QM341_RS10350 (2056072) | 2056072..2056824 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| QM341_RS10355 (2056875) | 2056875..2057204 | + | 330 | WP_000128907.1 | hypothetical protein | - |
| QM341_RS10360 (2057193) | 2057193..2057408 | - | 216 | WP_001025874.1 | DUF2829 domain-containing protein | - |
| QM341_RS10365 (2057424) | 2057424..2057687 | - | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| QM341_RS10370 (2057684) | 2057684..2057857 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| QM341_RS10375 (2057820) | 2057820..2058533 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| QM341_RS10380 (2058549) | 2058549..2059481 | + | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| QM341_RS10385 (2059487) | 2059487..2059829 | + | 343 | Protein_2008 | hypothetical protein | - |
| QM341_RS10390 (2060033) | 2060033..2060215 | + | 183 | WP_000705248.1 | hypothetical protein | - |
| QM341_RS10395 (2060315) | 2060315..2060779 | + | 465 | WP_000825947.1 | hypothetical protein | - |
| QM341_RS10400 (2060838) | 2060838..2061875 | + | 1038 | WP_000857185.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QM341_RS10405 (2061926) | 2061926..2062756 | + | 831 | Protein_2012 | Phospholipase C | VF |
| QM341_RS10410 (2062994) | 2062994..2064010 | - | 1017 | WP_000595324.1 | putative leukocidin-like protein 1 | VF |
| QM341_RS10415 (2064032) | 2064032..2065087 | - | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| QM341_RS10420 (2065522) | 2065522..2066745 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| QM341_RS10425 (2067117) | 2067117..2067962 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| QM341_RS10430 (2068024) | 2068024..2068935 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| QM341_RS10435 (2069075) | 2069075..2070403 | + | 1329 | WP_265182978.1 | TrkH family potassium uptake protein | - |
| QM341_RS10440 (2071256) | 2071256..2071699 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| QM341_RS10445 (2071805) | 2071805..2072241 | - | 437 | Protein_2020 | hypothetical protein | - |
| QM341_RS10450 (2072559) | 2072559..2073149 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| QM341_RS10455 (2073146) | 2073146..2073358 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| QM341_RS10460 (2073419) | 2073419..2073965 | + | 547 | Protein_2023 | site-specific integrase | - |
| QM341_RS10465 (2074060) | 2074060..2075676 | - | 1617 | WP_000240645.1 | 60 kDa chaperonin | VF |
| QM341_RS10470 (2075752) | 2075752..2076036 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| QM341_RS10475 (2076211) | 2076211..2076954 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease MroQ | - |
| QM341_RS10480 (2076979) | 2076979..2078160 | - | 1182 | WP_000120303.1 | SdrH family protein | - |
| QM341_RS10485 (2078357) | 2078357..2078983 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| QM341_RS10490 (2079344) | 2079344..2080129 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| QM341_RS10495 (2080726) | 2080726..2080860 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA22266, TA22270 | NC_009641 | 2089433..2146383 | 0.009 |