MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 125500 bp
Accession: NZ_CP124518 Location: 1..125500 Organism: Escherichia coli strain AVS0343 Replicon: plasmid pAVS0343-A
Accession: NZ_CP124518 Location: 1..125500 Organism: Escherichia coli strain AVS0343 Replicon: plasmid pAVS0343-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB09_RS24550 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QJB09_RS24555 (1263) | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| QJB09_RS24560 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| QJB09_RS24565 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| QJB09_RS24570 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| QJB09_RS24575 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| QJB09_RS24580 (5303) | 5303..7273 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| QJB09_RS24585 (7280) | 7280..8071 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QJB09_RS24590 (8134) | 8134..8742 | - | 609 | Protein_8 | IS66 family transposase ISEc22 | Transposase |
| QJB09_RS24595 (8810) | 8810..9591 | - | 782 | Protein_9 | IS21 family transposase IS100 | Transposase |
| QJB09_RS24600 (9588) | 9588..10609 | - | 1022 | Protein_10 | IS21 family transposase IS100kyp | Transposase |
| QJB09_RS24605 (10694) | 10694..11639 | - | 946 | Protein_11 | IS21 family transposase IS100kyp | Transposase |
| QJB09_RS24610 (11688) | 11688..12035 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QJB09_RS24615 (12032) | 12032..12436 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QJB09_RS24620 (12516) | 12516..12854 | - | 339 | Protein_14 | IS3 family transposase IS629 | Transposase |
| QJB09_RS24625 (12938) | 12938..14446 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| QJB09_RS24630 (15119) | 15119..15858 | - | 740 | Protein_16 | IS3 family transposase IS629 | Transposase |
| QJB09_RS24635 (15884) | 15884..16189 | + | 306 | Protein_17 | IS91 family transposase ISSbo1 | Transposase |
| QJB09_RS24640 (16712) | 16712..17887 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| QJB09_RS24645 (17956) | 17956..20217 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| QJB09_RS24650 (20386) | 20386..21162 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| QJB09_RS24655 (21170) | 21170..22045 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| QJB09_RS24660 (22419) | 22419..23044 | - | 626 | Protein_22 | replication initiation protein | - |
| QJB09_RS24665 (24496) | 24496..24831 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| QJB09_RS24670 (24960) | 24960..25307 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QJB09_RS24675 (25327) | 25327..25836 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| QJB09_RS24680 (25833) | 25833..26093 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| QJB09_RS24685 (26195) | 26195..26934 | + | 740 | Protein_27 | IS3 family transposase IS629 | Transposase |
| QJB09_RS24690 (27607) | 27607..27921 | + | 315 | Protein_28 | IS5 family transposase ISKpn26 | Transposase |
| QJB09_RS24695 (27922) | 27922..28095 | + | 174 | Protein_29 | IS5 family transposase ISKpn26 | Transposase |
| QJB09_RS24700 (28245) | 28245..28878 | - | 634 | Protein_30 | histidine-type phosphatase | - |
| QJB09_RS24705 (29000) | 29000..29485 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| QJB09_RS24710 (29510) | 29510..29995 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QJB09_RS24715 (29982) | 29982..30677 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QJB09_RS24720 (30682) | 30682..31812 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QJB09_RS24725 (31802) | 31802..33085 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QJB09_RS24730 (33088) | 33088..34467 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QJB09_RS24735 (34571) | 34571..35098 | - | 528 | WP_000178050.1 | iron transporter | - |
| QJB09_RS24740 (35139) | 35139..37025 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QJB09_RS24745 (37372) | 37372..38133 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QJB09_RS24750 (38370) | 38370..38876 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| QJB09_RS24755 (38866) | 38866..39036 | - | 171 | Protein_41 | DsbA family protein | - |
| QJB09_RS24760 (39174) | 39174..39287 | - | 114 | Protein_42 | IS6 family transposase | - |
| QJB09_RS24765 (39487) | 39487..40184 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| QJB09_RS24770 (40199) | 40199..40417 | + | 219 | Protein_44 | IS4 family transposase | - |
| QJB09_RS24775 (40467) | 40467..41170 | - | 704 | Protein_45 | IS6 family transposase IS15DI | Transposase |
| QJB09_RS24780 (41229) | 41229..41978 | - | 750 | Protein_46 | IS91 family transposase ISAzo26 | Transposase |
| QJB09_RS24785 (42136) | 42136..42609 | + | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| QJB09_RS24790 (42740) | 42740..43528 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| QJB09_RS24795 (43734) | 43734..44081 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QJB09_RS24800 (44075) | 44075..44914 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QJB09_RS24805 (45042) | 45042..45245 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| QJB09_RS24810 (45401) | 45401..46606 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| QJB09_RS24815 (46617) | 46617..46922 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| QJB09_RS24820 (46966) | 46966..47031 | + | 66 | Protein_54 | EAL domain-containing protein | - |
| QJB09_RS24825 (47149) | 47149..47913 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| QJB09_RS24830 (48406) | 48406..48990 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| QJB09_RS24835 (48990) | 48990..50228 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| QJB09_RS24840 (50225) | 50225..51130 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| QJB09_RS24845 (51252) | 51252..51956 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJB09_RS24850 (52017) | 52017..52193 | + | 177 | Protein_60 | replication protein C, IncQ-type | - |
| QJB09_RS24855 (52501) | 52501..53316 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| QJB09_RS24860 (53377) | 53377..54180 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QJB09_RS24865 (54180) | 54180..55016 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| QJB09_RS24870 (55070) | 55070..55306 | + | 237 | WP_042005022.1 | hypothetical protein | - |
| QJB09_RS24875 (55338) | 55338..55964 | - | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QJB09_RS24880 (56070) | 56070..57269 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QJB09_RS24885 (57301) | 57301..57633 | - | 333 | Protein_67 | EamA family transporter | - |
| QJB09_RS24890 (57686) | 57686..58390 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJB09_RS24895 (58450) | 58450..58812 | - | 363 | Protein_69 | IS5 family transposase IS903B | Transposase |
| QJB09_RS24900 (58847) | 58847..59722 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| QJB09_RS24905 (60036) | 60036..60740 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJB09_RS24910 (60806) | 60806..61354 | + | 549 | Protein_72 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJB09_RS24915 (61390) | 61390..61805 | - | 416 | Protein_73 | IS1-like element IS1B family transposase | - |
| QJB09_RS24920 (62054) | 62054..62455 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJB09_RS24925 (62388) | 62388..62645 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJB09_RS24930 (62738) | 62738..63391 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJB09_RS24935 (64331) | 64331..65188 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| QJB09_RS24940 (65181) | 65181..65255 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QJB09_RS24945 (65492) | 65492..65746 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QJB09_RS24950 (66043) | 66043..66177 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (66222) | 66222..66282 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (66222) | 66222..66282 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (66222) | 66222..66282 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (66222) | 66222..66282 | + | 61 | NuclAT_1 | - | Antitoxin Detail |
| QJB09_RS24955 (66249) | 66249..66535 | - | 287 | Protein_81 | DUF2726 domain-containing protein | - |
| QJB09_RS24960 (66613) | 66613..68226 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJB09_RS24965 (68257) | 68257..68607 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJB09_RS24970 (68604) | 68604..69029 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJB09_RS24975 (69588) | 69588..69800 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QJB09_RS24980 (69931) | 69931..70491 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QJB09_RS24985 (70546) | 70546..71292 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QJB09_RS24990 (71312) | 71312..76582 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJB09_RS24995 (76582) | 76582..78744 | - | 2163 | WP_023144755.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJB09_RS25000 (78741) | 78741..79520 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| QJB09_RS25005 (79723) | 79723..80454 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| QJB09_RS25010 (80486) | 80486..80983 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| QJB09_RS25015 (81002) | 81002..83821 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJB09_RS25020 (83818) | 83818..85191 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| QJB09_RS25025 (85178) | 85178..85351 | - | 174 | Protein_95 | conjugal transfer protein TrbF | - |
| QJB09_RS25035 (86121) | 86121..86709 | - | 589 | Protein_97 | IS3-like element IS150 family transposase | - |
| - (86757) | 86757..86943 | - | 187 | NuclAT_0 | - | - |
| - (86757) | 86757..86943 | - | 187 | NuclAT_0 | - | - |
| - (86757) | 86757..86943 | - | 187 | NuclAT_0 | - | - |
| - (86757) | 86757..86943 | - | 187 | NuclAT_0 | - | - |
| QJB09_RS25040 (86912) | 86912..87674 | - | 763 | Protein_98 | plasmid SOS inhibition protein A | - |
| QJB09_RS25045 (87671) | 87671..88105 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| QJB09_RS25050 (88160) | 88160..90118 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| QJB09_RS25055 (90184) | 90184..90417 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| QJB09_RS25060 (90480) | 90480..91019 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| QJB09_RS25065 (91045) | 91045..91251 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| QJB09_RS25070 (91164) | 91164..91766 | - | 603 | WP_283192261.1 | hypothetical protein | - |
| QJB09_RS25075 (91968) | 91968..92531 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| QJB09_RS25080 (92579) | 92579..93940 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| QJB09_RS25085 (93992) | 93992..94222 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QJB09_RS25090 (95257) | 95257..95448 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QJB09_RS25095 (95445) | 95445..95867 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJB09_RS25100 (95914) | 95914..96339 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QJB09_RS25105 (96756) | 96756..97532 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QJB09_RS25110 (97583) | 97583..98101 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QJB09_RS25115 (98031) | 98031..98252 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QJB09_RS25120 (98253) | 98253..98936 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QJB09_RS25125 (99013) | 99013..99324 | - | 312 | WP_032143366.1 | hypothetical protein | - |
| QJB09_RS25130 (99321) | 99321..100223 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QJB09_RS25135 (101090) | 101090..102061 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJB09_RS25140 (102061) | 102061..103227 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| QJB09_RS25145 (103815) | 103815..104570 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJB09_RS25150 (105344) | 105344..106150 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QJB09_RS25155 (106151) | 106151..106456 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJB09_RS25160 (106458) | 106458..106676 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJB09_RS25165 (107384) | 107384..108379 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QJB09_RS25170 (108422) | 108422..109315 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QJB09_RS25180 (110363) | 110363..113479 | - | 3117 | WP_001553854.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QJB09_RS25185 (113601) | 113601..114872 | - | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
| QJB09_RS25190 (114869) | 114869..116425 | - | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| QJB09_RS25195 (116608) | 116608..116829 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QJB09_RS25200 (116829) | 116829..117209 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QJB09_RS25205 (117214) | 117214..117393 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QJB09_RS25210 (117421) | 117421..117699 | + | 279 | Protein_132 | pdcB | - |
| QJB09_RS25215 (117704) | 117704..118117 | + | 414 | Protein_133 | integrase core domain-containing protein | - |
| QJB09_RS25220 (118067) | 118067..118402 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| QJB09_RS25225 (118612) | 118612..119592 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| QJB09_RS25230 (119836) | 119836..121239 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| QJB09_RS25235 (121226) | 121226..122158 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QJB09_RS25240 (122267) | 122267..122596 | - | 330 | Protein_138 | TOBE domain-containing protein | - |
| QJB09_RS25250 (123457) | 123457..123615 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| QJB09_RS25255 (123774) | 123774..124745 | - | 972 | Protein_141 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|