MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108535 bp
Accession: NZ_CP124482 Location: 1..108535 Organism: Escherichia coli strain AVS0756 Replicon: plasmid pAVS0756-A
Accession: NZ_CP124482 Location: 1..108535 Organism: Escherichia coli strain AVS0756 Replicon: plasmid pAVS0756-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP55_RS23530 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QJP55_RS23535 (1263) | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| QJP55_RS23540 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| QJP55_RS23545 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| QJP55_RS23550 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| QJP55_RS23555 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| QJP55_RS23560 (5504) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| QJP55_RS23565 (6210) | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| QJP55_RS23570 (8187) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QJP55_RS23575 (9041) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| QJP55_RS23580 (9717) | 9717..10470 | - | 754 | Protein_10 | IS21 family transposase IS100kyp | Transposase |
| QJP55_RS23585 (10409) | 10409..10540 | - | 132 | Protein_11 | IS21 family transposase IS100 | Transposase |
| QJP55_RS23590 (10497) | 10497..11519 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| QJP55_RS23595 (11605) | 11605..12550 | - | 946 | Protein_13 | IS66 family transposase ISEc8 | Transposase |
| QJP55_RS23600 (12599) | 12599..12946 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QJP55_RS23605 (12943) | 12943..13347 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QJP55_RS23610 (13427) | 13427..13765 | - | 339 | Protein_16 | IS3 family transposase IS629 | Transposase |
| QJP55_RS23615 (13849) | 13849..15042 | - | 1194 | Protein_17 | reverse transcriptase domain-containing protein | - |
| QJP55_RS23620 (15095) | 15095..15799 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP55_RS23625 (16244) | 16244..16549 | - | 306 | Protein_19 | IS91 family transposase ISSbo1 | Transposase |
| QJP55_RS23630 (16575) | 16575..17314 | + | 740 | Protein_20 | IS3 family transposase IS629 | Transposase |
| QJP55_RS23635 (17987) | 17987..18319 | + | 333 | Protein_21 | IS6 family transposase IS15 | Transposase |
| QJP55_RS23640 (18373) | 18373..19077 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP55_RS23645 (19127) | 19127..19345 | - | 219 | Protein_23 | IS4 family transposase | - |
| QJP55_RS23655 (20257) | 20257..20370 | + | 114 | Protein_25 | IS6 family transposase | - |
| QJP55_RS23660 (20508) | 20508..20678 | + | 171 | Protein_26 | DsbA family protein | - |
| QJP55_RS23665 (20668) | 20668..21174 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| QJP55_RS23670 (21411) | 21411..22172 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QJP55_RS23675 (22519) | 22519..24405 | + | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QJP55_RS23680 (24446) | 24446..24973 | + | 528 | WP_000178050.1 | iron transporter | - |
| QJP55_RS23685 (25077) | 25077..26456 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QJP55_RS23690 (26459) | 26459..27742 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QJP55_RS23695 (27732) | 27732..28862 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QJP55_RS23700 (28867) | 28867..29562 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QJP55_RS23705 (29549) | 29549..30034 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QJP55_RS23710 (30059) | 30059..30544 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| QJP55_RS23715 (30666) | 30666..31299 | + | 634 | Protein_37 | histidine-type phosphatase | - |
| QJP55_RS23720 (31449) | 31449..31622 | - | 174 | Protein_38 | IS5 family transposase ISKpn26 | Transposase |
| QJP55_RS23725 (31623) | 31623..31937 | - | 315 | Protein_39 | IS5 family transposase ISKpn26 | Transposase |
| QJP55_RS23730 (32610) | 32610..33349 | - | 740 | Protein_40 | IS3 family transposase IS629 | Transposase |
| QJP55_RS23735 (33451) | 33451..33711 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| QJP55_RS23740 (33708) | 33708..34217 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| QJP55_RS23745 (34237) | 34237..34584 | - | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QJP55_RS23750 (34713) | 34713..35048 | + | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| QJP55_RS23755 (36500) | 36500..37125 | + | 626 | Protein_45 | replication initiation protein | - |
| QJP55_RS23760 (37574) | 37574..38278 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| QJP55_RS23765 (38315) | 38315..38992 | - | 678 | WP_283201892.1 | IS6 family transposase | - |
| QJP55_RS23770 (39053) | 39053..39229 | + | 177 | Protein_48 | replication protein C, IncQ-type | - |
| QJP55_RS23775 (39537) | 39537..40352 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| QJP55_RS23780 (40413) | 40413..41216 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QJP55_RS23785 (41216) | 41216..42052 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| QJP55_RS23790 (42106) | 42106..42342 | + | 237 | WP_042005022.1 | hypothetical protein | - |
| QJP55_RS23795 (42374) | 42374..43000 | - | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QJP55_RS23800 (43106) | 43106..44305 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QJP55_RS23805 (44337) | 44337..44669 | - | 333 | Protein_55 | EamA family transporter | - |
| QJP55_RS23810 (44722) | 44722..45426 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| QJP55_RS23815 (45486) | 45486..45848 | - | 363 | Protein_57 | IS5 family transposase IS903B | Transposase |
| QJP55_RS23820 (45883) | 45883..46758 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| QJP55_RS23825 (47072) | 47072..47776 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP55_RS23830 (47842) | 47842..48387 | + | 546 | Protein_60 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJP55_RS23835 (48423) | 48423..48838 | - | 416 | Protein_61 | IS1-like element IS1B family transposase | - |
| QJP55_RS23840 (49087) | 49087..49488 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJP55_RS23845 (49421) | 49421..49678 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJP55_RS23850 (49771) | 49771..50424 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJP55_RS23855 (51364) | 51364..52221 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| QJP55_RS23860 (52214) | 52214..52288 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QJP55_RS23865 (52525) | 52525..52779 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QJP55_RS23870 (53076) | 53076..53210 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (53255) | 53255..53315 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (53255) | 53255..53315 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (53255) | 53255..53315 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (53255) | 53255..53315 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QJP55_RS23875 (53282) | 53282..53568 | - | 287 | Protein_69 | DUF2726 domain-containing protein | - |
| QJP55_RS23880 (53646) | 53646..55259 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP55_RS23885 (55290) | 55290..55640 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP55_RS23890 (55637) | 55637..56062 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP55_RS23895 (56621) | 56621..56833 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QJP55_RS23900 (56964) | 56964..57524 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QJP55_RS23905 (57579) | 57579..58325 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QJP55_RS23910 (58345) | 58345..63615 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJP55_RS23915 (63615) | 63615..65759 | - | 2145 | WP_061093526.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJP55_RS23920 (65756) | 65756..66535 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| QJP55_RS23925 (66738) | 66738..67469 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| QJP55_RS23930 (67501) | 67501..67998 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| QJP55_RS23935 (68017) | 68017..70836 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP55_RS23940 (70833) | 70833..72206 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| QJP55_RS23945 (72193) | 72193..72585 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| QJP55_RS23950 (72566) | 72566..72913 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| QJP55_RS23955 (72843) | 72843..73388 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJP55_RS23960 (73375) | 73375..73659 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJP55_RS23965 (73786) | 73786..74106 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| QJP55_RS23975 (74907) | 74907..75137 | - | 231 | WP_021526513.1 | hypothetical protein | - |
| QJP55_RS23980 (75163) | 75163..75726 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| QJP55_RS23985 (75774) | 75774..77135 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| QJP55_RS23990 (77187) | 77187..77417 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP55_RS23995 (78452) | 78452..78643 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP55_RS24000 (78640) | 78640..79062 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJP55_RS24005 (79109) | 79109..79534 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QJP55_RS24010 (79951) | 79951..80727 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QJP55_RS24015 (80778) | 80778..81296 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QJP55_RS24020 (81226) | 81226..81447 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP55_RS24025 (81448) | 81448..82131 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QJP55_RS24030 (82208) | 82208..82519 | - | 312 | WP_032143366.1 | hypothetical protein | - |
| QJP55_RS24035 (82516) | 82516..83418 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QJP55_RS24040 (84113) | 84113..85084 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJP55_RS24045 (85084) | 85084..86250 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| QJP55_RS24050 (86838) | 86838..87593 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJP55_RS24055 (88367) | 88367..89173 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QJP55_RS24060 (89174) | 89174..89479 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJP55_RS24065 (89481) | 89481..89699 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJP55_RS24070 (90407) | 90407..91402 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QJP55_RS24075 (91445) | 91445..92338 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QJP55_RS24085 (93386) | 93386..96502 | - | 3117 | WP_001553854.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QJP55_RS24090 (96624) | 96624..97907 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| QJP55_RS24095 (97904) | 97904..99460 | - | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| QJP55_RS24100 (99643) | 99643..99864 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QJP55_RS24105 (99864) | 99864..100244 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QJP55_RS24110 (100249) | 100249..100428 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QJP55_RS24115 (100456) | 100456..100734 | + | 279 | Protein_117 | pdcB | - |
| QJP55_RS24120 (100739) | 100739..101152 | + | 414 | Protein_118 | integrase core domain-containing protein | - |
| QJP55_RS24125 (101102) | 101102..101437 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| QJP55_RS24130 (101647) | 101647..102627 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| QJP55_RS24135 (102871) | 102871..104274 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| QJP55_RS24140 (104261) | 104261..105193 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QJP55_RS24145 (105302) | 105302..105631 | - | 330 | Protein_123 | TOBE domain-containing protein | - |
| QJP55_RS24155 (106492) | 106492..106650 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| QJP55_RS24160 (106809) | 106809..107780 | - | 972 | Protein_126 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|