MGE detailed information
MGE type: Conjugative plasmid MGE length: 130369 bp
Accession: NZ_CP124476 Location: 1..130369 Organism: Escherichia coli strain AVS0969 Replicon: plasmid pAVS0969-A
Accession: NZ_CP124476 Location: 1..130369 Organism: Escherichia coli strain AVS0969 Replicon: plasmid pAVS0969-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP78_RS25390 (1) | 1..978 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| QJP78_RS25395 (1221) | 1221..1961 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| QJP78_RS25400 (2082) | 2082..2270 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| QJP78_RS25405 (2637) | 2637..3806 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| QJP78_RS25410 (4032) | 4032..4207 | - | 176 | Protein_4 | IS3 family transposase | - |
| QJP78_RS25415 (4653) | 4653..4925 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QJP78_RS25420 (5462) | 5462..5886 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| QJP78_RS25425 (6168) | 6168..8135 | + | 1968 | Protein_7 | Hemin receptor | VF |
| QJP78_RS25430 (8142) | 8142..8933 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QJP78_RS25435 (8996) | 8996..9604 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| QJP78_RS25440 (9672) | 9672..10453 | - | 782 | Protein_10 | IS21 family transposase IS100 | Transposase |
| QJP78_RS25445 (10450) | 10450..11470 | - | 1021 | Protein_11 | IS21 family transposase IS100kyp | Transposase |
| QJP78_RS25450 (11555) | 11555..12500 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| QJP78_RS25455 (12549) | 12549..12896 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QJP78_RS25460 (12893) | 12893..13297 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QJP78_RS25465 (13377) | 13377..13715 | - | 339 | Protein_15 | IS3 family transposase IS629 | Transposase |
| QJP78_RS25470 (13799) | 13799..15307 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| QJP78_RS25475 (15980) | 15980..16449 | - | 470 | Protein_17 | IS3 family transposase IS629 | Transposase |
| QJP78_RS25480 (16512) | 16512..17216 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP78_RS25485 (17269) | 17269..17601 | + | 333 | Protein_19 | EamA family transporter | - |
| QJP78_RS25490 (17633) | 17633..18832 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QJP78_RS25495 (18938) | 18938..19564 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QJP78_RS25500 (19596) | 19596..19832 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| QJP78_RS25505 (19886) | 19886..20722 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| QJP78_RS25510 (20722) | 20722..21525 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QJP78_RS25515 (21586) | 21586..22401 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| QJP78_RS25520 (22709) | 22709..22885 | - | 177 | Protein_26 | replication protein C, IncQ-type | - |
| QJP78_RS25525 (22946) | 22946..23650 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP78_RS25530 (23772) | 23772..24677 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| QJP78_RS25535 (24674) | 24674..25912 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| QJP78_RS25540 (25912) | 25912..26496 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| QJP78_RS25545 (26989) | 26989..27753 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| QJP78_RS25550 (27871) | 27871..27936 | - | 66 | Protein_32 | EAL domain-containing protein | - |
| QJP78_RS25555 (27980) | 27980..28285 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| QJP78_RS25560 (28296) | 28296..29501 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| QJP78_RS25565 (29657) | 29657..29860 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| QJP78_RS25570 (29988) | 29988..30827 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QJP78_RS25575 (30821) | 30821..31168 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QJP78_RS25580 (31374) | 31374..32162 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| QJP78_RS25585 (32293) | 32293..32766 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| QJP78_RS25590 (32924) | 32924..33673 | + | 750 | Protein_40 | IS91 family transposase ISAzo26 | Transposase |
| QJP78_RS25595 (33732) | 33732..34434 | + | 703 | Protein_41 | IS6 family transposase IS15DI | Transposase |
| QJP78_RS25600 (34488) | 34488..34754 | - | 267 | Protein_42 | IS3 family transposase IS629 | Transposase |
| QJP78_RS25605 (34780) | 34780..35085 | + | 306 | Protein_43 | IS91 family transposase ISSbo1 | Transposase |
| QJP78_RS25610 (35608) | 35608..36783 | - | 1176 | WP_283184728.1 | putative protein YncE | VF |
| QJP78_RS25615 (36852) | 36852..39113 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| QJP78_RS25620 (39282) | 39282..40058 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| QJP78_RS25625 (40066) | 40066..40941 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| QJP78_RS25630 (41315) | 41315..41940 | - | 626 | Protein_48 | replication initiation protein | - |
| QJP78_RS25635 (43333) | 43333..43602 | - | 270 | WP_283184729.1 | colicin E1 family microcin immunity protein | - |
| QJP78_RS25640 (43856) | 43856..44203 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QJP78_RS25645 (44223) | 44223..44731 | - | 509 | Protein_51 | hypothetical protein | - |
| QJP78_RS25650 (44728) | 44728..44988 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| QJP78_RS25655 (45090) | 45090..45829 | + | 740 | Protein_53 | IS3 family transposase IS629 | Transposase |
| QJP78_RS25660 (46502) | 46502..46815 | + | 314 | Protein_54 | hypothetical protein | - |
| QJP78_RS25665 (46816) | 46816..46989 | + | 174 | Protein_55 | IS5 family transposase ISKpn26 | Transposase |
| QJP78_RS25670 (47139) | 47139..47772 | - | 634 | Protein_56 | histidine-type phosphatase | - |
| QJP78_RS25675 (47894) | 47894..48379 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| QJP78_RS25680 (48404) | 48404..48889 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QJP78_RS25685 (48876) | 48876..49571 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QJP78_RS25690 (49576) | 49576..50706 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QJP78_RS25695 (50696) | 50696..51979 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QJP78_RS25700 (51982) | 51982..53361 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QJP78_RS25705 (53465) | 53465..53992 | - | 528 | WP_000178050.1 | iron transporter | - |
| QJP78_RS25710 (54033) | 54033..55919 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QJP78_RS25715 (56266) | 56266..57027 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QJP78_RS25720 (57264) | 57264..57770 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| QJP78_RS25725 (57760) | 57760..57930 | - | 171 | Protein_67 | DsbA family protein | - |
| QJP78_RS25730 (58068) | 58068..58181 | - | 114 | Protein_68 | IS6 family transposase IS15DI | Transposase |
| QJP78_RS25735 (58381) | 58381..59077 | + | 697 | WP_169062229.1 | IS1 family transposase IS1X2 | Transposase |
| QJP78_RS25740 (59092) | 59092..59310 | + | 219 | Protein_70 | IS4 family transposase | - |
| QJP78_RS25745 (59360) | 59360..60062 | - | 703 | Protein_71 | IS6 family transposase IS15DI | Transposase |
| QJP78_RS25750 (60122) | 60122..60484 | - | 363 | Protein_72 | IS5 family transposase IS903B | Transposase |
| QJP78_RS25755 (60519) | 60519..61394 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| QJP78_RS25760 (61708) | 61708..62411 | + | 704 | Protein_74 | IS6 family transposase IS15DII | Transposase |
| QJP78_RS25765 (62477) | 62477..63022 | + | 546 | Protein_75 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJP78_RS25770 (63050) | 63050..63474 | - | 425 | Protein_76 | IS1 family transposase IS1R | Transposase |
| QJP78_RS25775 (63723) | 63723..64124 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJP78_RS25780 (64057) | 64057..64314 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJP78_RS25785 (64407) | 64407..65060 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJP78_RS25790 (65158) | 65158..65298 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| QJP78_RS25795 (65998) | 65998..66855 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| QJP78_RS25800 (66848) | 66848..66922 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QJP78_RS25805 (67156) | 67156..67409 | - | 254 | Protein_83 | replication regulatory protein RepA | - |
| - (67883) | 67883..67943 | + | 61 | NuclAT_2 | - | - |
| - (67883) | 67883..67943 | + | 61 | NuclAT_2 | - | - |
| - (67883) | 67883..67943 | + | 61 | NuclAT_2 | - | - |
| - (67883) | 67883..67943 | + | 61 | NuclAT_2 | - | - |
| QJP78_RS25810 (67910) | 67910..68110 | - | 201 | Protein_84 | hypothetical protein | - |
| QJP78_RS25815 (68141) | 68141..69754 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP78_RS25820 (69785) | 69785..70135 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP78_RS25825 (70132) | 70132..70494 | - | 363 | WP_001299377.1 | transposase | - |
| QJP78_RS25830 (71116) | 71116..71325 | - | 210 | Protein_88 | hypothetical protein | - |
| QJP78_RS25835 (71456) | 71456..72016 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QJP78_RS25840 (72071) | 72071..72814 | - | 744 | Protein_90 | conjugal transfer pilus acetylase TraX | - |
| QJP78_RS25845 (72834) | 72834..78101 | - | 5268 | Protein_91 | Multifunctional conjugation protein TraI | Relaxase |
| QJP78_RS25850 (78101) | 78101..80333 | - | 2233 | Protein_92 | type IV conjugative transfer system coupling protein TraD | - |
| QJP78_RS25855 (80330) | 80330..81109 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| QJP78_RS25860 (81311) | 81311..82042 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| QJP78_RS25865 (82074) | 82074..82560 | - | 487 | Protein_95 | entry exclusion protein | - |
| QJP78_RS25870 (82585) | 82585..85398 | - | 2814 | Protein_96 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP78_RS25875 (85391) | 85391..86748 | - | 1358 | Protein_97 | conjugal transfer pilus assembly protein TraH | - |
| QJP78_RS25880 (86752) | 86752..87133 | - | 382 | Protein_98 | F-type conjugal transfer protein TrbF | - |
| QJP78_RS25885 (87114) | 87114..87399 | - | 286 | Protein_99 | P-type conjugative transfer protein TrbJ | - |
| QJP78_RS25890 (87389) | 87389..87932 | - | 544 | Protein_100 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJP78_RS25895 (87919) | 87919..88138 | - | 220 | Protein_101 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJP78_RS25900 (88326) | 88326..88646 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| QJP78_RS25905 (89137) | 89137..89138 | - | 2 | WP_101416779.1 | IS1-like element IS1X4 family transposase | - |
| QJP78_RS25910 (89464) | 89464..89773 | - | 310 | Protein_104 | type IV conjugative transfer system protein TraL | - |
| QJP78_RS25915 (89778) | 89778..90140 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| QJP78_RS25920 (90174) | 90174..90401 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| QJP78_RS25925 (90489) | 90489..91166 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| QJP78_RS25930 (91300) | 91300..91683 | - | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QJP78_RS25935 (92120) | 92120..92617 | + | 498 | WP_113391481.1 | hypothetical protein | VF |
| QJP78_RS25940 (92914) | 92914..93734 | - | 821 | Protein_110 | DUF932 domain-containing protein | - |
| QJP78_RS25945 (93852) | 93852..94137 | - | 286 | Protein_111 | hypothetical protein | - |
| QJP78_RS25950 (94436) | 94436..94609 | + | 174 | Protein_112 | hypothetical protein | - |
| QJP78_RS25955 (94607) | 94607..94837 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| QJP78_RS25960 (95057) | 95057..95182 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QJP78_RS25965 (95124) | 95124..95273 | - | 150 | Protein_115 | plasmid maintenance protein Mok | - |
| - (95259) | 95259..95299 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (95259) | 95259..95299 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (95259) | 95259..95299 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (95259) | 95259..95299 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| QJP78_RS25970 (95326) | 95326..96694 | - | 1369 | Protein_116 | IS3-like element IS150 family transposase | - |
| - (96742) | 96742..96928 | - | 187 | NuclAT_0 | - | - |
| - (96742) | 96742..96928 | - | 187 | NuclAT_0 | - | - |
| - (96742) | 96742..96928 | - | 187 | NuclAT_0 | - | - |
| - (96742) | 96742..96928 | - | 187 | NuclAT_0 | - | - |
| QJP78_RS25975 (96897) | 96897..97659 | - | 763 | Protein_117 | plasmid SOS inhibition protein A | - |
| QJP78_RS25980 (97656) | 97656..98090 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| QJP78_RS25985 (98145) | 98145..100102 | - | 1958 | Protein_119 | ParB/RepB/Spo0J family partition protein | - |
| QJP78_RS25990 (100167) | 100167..100399 | - | 233 | Protein_120 | DUF905 family protein | - |
| QJP78_RS25995 (100462) | 100462..101000 | - | 539 | Protein_121 | single-stranded DNA-binding protein | - |
| QJP78_RS26000 (101026) | 101026..101232 | - | 207 | WP_283184727.1 | single-stranded DNA-binding protein | - |
| QJP78_RS26005 (101644) | 101644..101916 | - | 273 | WP_048264352.1 | hypothetical protein | - |
| QJP78_RS26010 (101942) | 101942..102505 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| QJP78_RS26015 (102553) | 102553..103912 | - | 1360 | Protein_125 | DUF3560 domain-containing protein | - |
| QJP78_RS26020 (103964) | 103964..104194 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP78_RS26025 (105229) | 105229..105420 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP78_RS26030 (105417) | 105417..105839 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJP78_RS26035 (105885) | 105885..106310 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QJP78_RS26040 (106726) | 106726..107501 | - | 776 | Protein_130 | hypothetical protein | - |
| QJP78_RS26045 (107552) | 107552..108070 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QJP78_RS26050 (108000) | 108000..108221 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP78_RS26055 (108222) | 108222..108905 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QJP78_RS26060 (108982) | 108982..109293 | - | 312 | WP_032143366.1 | hypothetical protein | - |
| QJP78_RS26065 (109290) | 109290..110192 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QJP78_RS26070 (111059) | 111059..112029 | - | 971 | Protein_136 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJP78_RS26075 (112029) | 112029..113193 | - | 1165 | Protein_137 | plasmid-partitioning protein SopA | - |
| QJP78_RS26080 (113781) | 113781..114536 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJP78_RS26085 (115311) | 115311..116115 | - | 805 | Protein_139 | site-specific integrase | - |
| QJP78_RS26090 (116116) | 116116..116421 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJP78_RS26095 (116423) | 116423..116641 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJP78_RS26100 (117349) | 117349..118344 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QJP78_RS26105 (118348) | 118348..119280 | + | 933 | WP_000991832.1 | S-4TM family putative pore-forming effector | - |
| QJP78_RS26115 (120170) | 120170..121294 | - | 1125 | Protein_145 | type I restriction-modification system subunit M | - |
| QJP78_RS26120 (121477) | 121477..121698 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QJP78_RS26125 (121698) | 121698..122078 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QJP78_RS26130 (122083) | 122083..122262 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QJP78_RS26135 (122290) | 122290..122568 | + | 279 | Protein_149 | pdcB | - |
| QJP78_RS26140 (122573) | 122573..122986 | + | 414 | Protein_150 | IS3 family transposase ISLad1 | Transposase |
| QJP78_RS26145 (122936) | 122936..123271 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| QJP78_RS26150 (123481) | 123481..124461 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| QJP78_RS26155 (124705) | 124705..126108 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| QJP78_RS26160 (126095) | 126095..127027 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QJP78_RS26165 (127136) | 127136..127465 | - | 330 | Protein_155 | TOBE domain-containing protein | - |
| QJP78_RS26175 (128326) | 128326..128484 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| QJP78_RS26180 (128643) | 128643..129614 | - | 972 | Protein_158 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|