MGE detailed information
MGE type: Conjugative plasmid MGE length: 135326 bp
Accession: NZ_CP124411 Location: 1..135326 Organism: Escherichia coli strain AVS0543 Replicon: plasmid pAVS0543-A
Accession: NZ_CP124411 Location: 1..135326 Organism: Escherichia coli strain AVS0543 Replicon: plasmid pAVS0543-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP61_RS24305 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QJP61_RS24310 (1263) | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| QJP61_RS24315 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| QJP61_RS24320 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| QJP61_RS24325 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| QJP61_RS24330 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| QJP61_RS24335 (5504) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| QJP61_RS24340 (6210) | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| QJP61_RS24345 (8187) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QJP61_RS24350 (9041) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| QJP61_RS24355 (9717) | 9717..10499 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| QJP61_RS24360 (10496) | 10496..11518 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| QJP61_RS24365 (11604) | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| QJP61_RS24370 (12598) | 12598..12945 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QJP61_RS24375 (12942) | 12942..13346 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QJP61_RS24380 (13426) | 13426..13764 | - | 339 | Protein_15 | IS3 family transposase IS629 | Transposase |
| QJP61_RS24385 (13848) | 13848..15356 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| QJP61_RS24390 (16029) | 16029..16768 | - | 740 | Protein_17 | IS3 family transposase IS629 | Transposase |
| QJP61_RS24395 (16794) | 16794..17099 | + | 306 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| QJP61_RS24400 (17622) | 17622..18797 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| QJP61_RS24405 (18866) | 18866..21127 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| QJP61_RS24410 (21296) | 21296..22072 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| QJP61_RS24415 (22080) | 22080..22955 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| QJP61_RS24420 (23329) | 23329..23954 | - | 626 | Protein_23 | replication initiation protein | - |
| QJP61_RS24425 (25406) | 25406..25741 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| QJP61_RS24430 (25870) | 25870..26217 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QJP61_RS24435 (26237) | 26237..26746 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| QJP61_RS24440 (26743) | 26743..27003 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| QJP61_RS24445 (27105) | 27105..27844 | + | 740 | Protein_28 | IS3 family transposase IS629 | Transposase |
| QJP61_RS24450 (28517) | 28517..28831 | + | 315 | Protein_29 | IS5 family transposase ISKpn26 | Transposase |
| QJP61_RS24455 (28832) | 28832..29005 | + | 174 | Protein_30 | IS5 family transposase ISKpn26 | Transposase |
| QJP61_RS24460 (29155) | 29155..29788 | - | 634 | Protein_31 | histidine-type phosphatase | - |
| QJP61_RS24465 (29910) | 29910..30395 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| QJP61_RS24470 (30420) | 30420..30905 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QJP61_RS24475 (30892) | 30892..31587 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QJP61_RS24480 (31592) | 31592..32722 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QJP61_RS24485 (32712) | 32712..33995 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QJP61_RS24490 (33998) | 33998..35377 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QJP61_RS24495 (35481) | 35481..36008 | - | 528 | WP_000178050.1 | iron transporter | - |
| QJP61_RS24500 (36049) | 36049..37935 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QJP61_RS24505 (38282) | 38282..39043 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QJP61_RS24510 (39280) | 39280..39786 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| QJP61_RS24515 (39776) | 39776..39946 | - | 171 | Protein_42 | DsbA family protein | - |
| QJP61_RS24520 (40084) | 40084..40197 | - | 114 | Protein_43 | IS6 family transposase | - |
| QJP61_RS24525 (40397) | 40397..41094 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| QJP61_RS24530 (41109) | 41109..41327 | + | 219 | Protein_45 | IS4 family transposase | - |
| QJP61_RS24535 (41377) | 41377..42080 | - | 704 | Protein_46 | IS6 family transposase IS15DI | Transposase |
| QJP61_RS24540 (42142) | 42142..42537 | + | 396 | Protein_47 | IS91 family transposase ISCARN110 | Transposase |
| QJP61_RS24545 (42596) | 42596..43300 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP61_RS24550 (43354) | 43354..43716 | - | 363 | Protein_49 | class 1 integron integrase IntI1 | - |
| QJP61_RS24555 (43874) | 43874..44347 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| QJP61_RS24560 (44478) | 44478..45266 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| QJP61_RS24565 (45472) | 45472..45819 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QJP61_RS24570 (45813) | 45813..46652 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QJP61_RS24575 (46780) | 46780..46983 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| QJP61_RS24580 (47139) | 47139..48344 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| QJP61_RS24585 (48355) | 48355..48660 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| QJP61_RS24590 (48704) | 48704..48769 | + | 66 | Protein_57 | EAL domain-containing protein | - |
| QJP61_RS24595 (48887) | 48887..49651 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| QJP61_RS24600 (50144) | 50144..50728 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| QJP61_RS24605 (50728) | 50728..51966 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| QJP61_RS24610 (51963) | 51963..52868 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| QJP61_RS24615 (52990) | 52990..53694 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP61_RS24620 (53755) | 53755..53931 | + | 177 | Protein_63 | replication protein C, IncQ-type | - |
| QJP61_RS24625 (54239) | 54239..55054 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| QJP61_RS24630 (55115) | 55115..55918 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QJP61_RS24635 (55918) | 55918..56754 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| QJP61_RS24640 (56808) | 56808..57044 | + | 237 | WP_042005022.1 | hypothetical protein | - |
| QJP61_RS24645 (57076) | 57076..57702 | - | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QJP61_RS24650 (57808) | 57808..59007 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QJP61_RS24655 (59039) | 59039..59371 | - | 333 | Protein_70 | EamA family transporter | - |
| QJP61_RS24660 (59424) | 59424..60128 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP61_RS24665 (60188) | 60188..60550 | - | 363 | Protein_72 | IS5 family transposase IS903B | Transposase |
| QJP61_RS24670 (60585) | 60585..61460 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| QJP61_RS24675 (61774) | 61774..62478 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP61_RS24680 (62544) | 62544..63089 | + | 546 | Protein_75 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJP61_RS24685 (63125) | 63125..63540 | - | 416 | Protein_76 | IS1-like element IS1B family transposase | - |
| QJP61_RS24690 (63789) | 63789..64190 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJP61_RS24695 (64123) | 64123..64380 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJP61_RS24700 (64473) | 64473..65126 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJP61_RS24705 (66066) | 66066..66923 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| QJP61_RS24710 (66916) | 66916..66990 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QJP61_RS24715 (67227) | 67227..67481 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QJP61_RS24720 (67778) | 67778..67912 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (67957) | 67957..68017 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (67957) | 67957..68017 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (67957) | 67957..68017 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (67957) | 67957..68017 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| QJP61_RS24725 (67984) | 67984..68270 | - | 287 | Protein_84 | DUF2726 domain-containing protein | - |
| QJP61_RS24730 (68348) | 68348..69961 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP61_RS24735 (69992) | 69992..70342 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP61_RS24740 (70339) | 70339..70764 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP61_RS24745 (71323) | 71323..71535 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QJP61_RS24750 (71666) | 71666..72226 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QJP61_RS24755 (72281) | 72281..73027 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QJP61_RS24760 (73047) | 73047..78317 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJP61_RS24765 (78317) | 78317..80555 | - | 2239 | Protein_92 | type IV conjugative transfer system coupling protein TraD | - |
| QJP61_RS24770 (80552) | 80552..81331 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| QJP61_RS24775 (81534) | 81534..82265 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| QJP61_RS24780 (82297) | 82297..82794 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| QJP61_RS24785 (82813) | 82813..85632 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP61_RS24790 (85629) | 85629..87002 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| QJP61_RS24795 (86989) | 86989..87381 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| QJP61_RS24800 (87362) | 87362..87709 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| QJP61_RS24805 (87639) | 87639..88184 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJP61_RS24810 (88171) | 88171..88455 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJP61_RS24820 (89390) | 89390..89701 | - | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| QJP61_RS24825 (89706) | 89706..90068 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| QJP61_RS24830 (90102) | 90102..90329 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| QJP61_RS24835 (90417) | 90417..91094 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| QJP61_RS24840 (91228) | 91228..91611 | - | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QJP61_RS24845 (91954) | 91954..92544 | + | 591 | WP_001376243.1 | hypothetical protein | VF |
| QJP61_RS24850 (92841) | 92841..93662 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QJP61_RS24855 (93781) | 93781..94068 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| QJP61_RS24860 (94093) | 94093..94299 | - | 207 | WP_024217497.1 | hypothetical protein | - |
| QJP61_RS24865 (94369) | 94369..94542 | + | 174 | Protein_112 | hypothetical protein | - |
| QJP61_RS24870 (94540) | 94540..94770 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| QJP61_RS24875 (94990) | 94990..95115 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QJP61_RS24880 (95057) | 95057..95206 | - | 150 | Protein_115 | plasmid maintenance protein Mok | - |
| - (95192) | 95192..95232 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (95192) | 95192..95232 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (95192) | 95192..95232 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (95192) | 95192..95232 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (96676) | 96676..96862 | - | 187 | NuclAT_0 | - | - |
| - (96676) | 96676..96862 | - | 187 | NuclAT_0 | - | - |
| - (96676) | 96676..96862 | - | 187 | NuclAT_0 | - | - |
| - (96676) | 96676..96862 | - | 187 | NuclAT_0 | - | - |
| QJP61_RS24890 (96831) | 96831..97593 | - | 763 | Protein_117 | plasmid SOS inhibition protein A | - |
| QJP61_RS24895 (97590) | 97590..98024 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| QJP61_RS24900 (98079) | 98079..100037 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| QJP61_RS24905 (100103) | 100103..100336 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| QJP61_RS24910 (100399) | 100399..100938 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| QJP61_RS24915 (100964) | 100964..101170 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| QJP61_RS24920 (101083) | 101083..101418 | - | 336 | WP_013023883.1 | hypothetical protein | - |
| QJP61_RS24925 (101411) | 101411..101686 | - | 276 | WP_071780182.1 | hypothetical protein | - |
| QJP61_RS24930 (101581) | 101581..101811 | - | 231 | WP_021526513.1 | hypothetical protein | - |
| QJP61_RS24935 (101837) | 101837..102400 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| QJP61_RS24940 (102448) | 102448..103809 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| QJP61_RS24945 (103861) | 103861..104091 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP61_RS24950 (105126) | 105126..105317 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP61_RS24955 (105314) | 105314..105736 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJP61_RS24960 (105783) | 105783..106208 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QJP61_RS24965 (106625) | 106625..107401 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QJP61_RS24970 (107452) | 107452..107970 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QJP61_RS24975 (107900) | 107900..108121 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP61_RS24980 (108122) | 108122..108805 | - | 684 | WP_283201982.1 | DNA methylase | - |
| QJP61_RS24985 (108882) | 108882..109193 | - | 312 | WP_032143366.1 | hypothetical protein | - |
| QJP61_RS24990 (109190) | 109190..110092 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QJP61_RS24995 (110916) | 110916..111887 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJP61_RS25000 (111887) | 111887..113053 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| QJP61_RS25005 (113641) | 113641..114396 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJP61_RS25010 (115170) | 115170..115976 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QJP61_RS25015 (115977) | 115977..116282 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJP61_RS25020 (116284) | 116284..116502 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJP61_RS25025 (117210) | 117210..118205 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QJP61_RS25030 (118248) | 118248..119141 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QJP61_RS25040 (120189) | 120189..123305 | - | 3117 | WP_001553854.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QJP61_RS25045 (123427) | 123427..124698 | - | 1272 | WP_283201983.1 | restriction endonuclease subunit S | - |
| QJP61_RS25050 (124695) | 124695..126251 | - | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| QJP61_RS25055 (126434) | 126434..126655 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QJP61_RS25060 (126655) | 126655..127035 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QJP61_RS25065 (127040) | 127040..127219 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QJP61_RS25070 (127247) | 127247..127525 | + | 279 | Protein_153 | pdcB | - |
| QJP61_RS25075 (127530) | 127530..127943 | + | 414 | Protein_154 | IS3 family transposase ISLad1 | Transposase |
| QJP61_RS25080 (127893) | 127893..128228 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| QJP61_RS25085 (128438) | 128438..129418 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| QJP61_RS25090 (129662) | 129662..131065 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| QJP61_RS25095 (131052) | 131052..131984 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QJP61_RS25100 (132093) | 132093..132422 | - | 330 | Protein_159 | TOBE domain-containing protein | - |
| QJP61_RS25110 (133283) | 133283..133441 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| QJP61_RS25115 (133600) | 133600..134571 | - | 972 | Protein_162 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|