MGE detailed information
MGE type: Conjugative plasmid MGE length: 103452 bp
Accession: NZ_CP124388 Location: 1..103452 Organism: Escherichia coli strain AVS0972 Replicon: plasmid pAVS0972-A
Accession: NZ_CP124388 Location: 1..103452 Organism: Escherichia coli strain AVS0972 Replicon: plasmid pAVS0972-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB01_RS24555 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QJB01_RS24560 (1263) | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| QJB01_RS24565 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| QJB01_RS24570 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| QJB01_RS24575 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| QJB01_RS24580 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| QJB01_RS24585 (5504) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| QJB01_RS24590 (6210) | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| QJB01_RS24595 (8187) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QJB01_RS24600 (9041) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| QJB01_RS24605 (9717) | 9717..10499 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| QJB01_RS24610 (10496) | 10496..11518 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| QJB01_RS24615 (11604) | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| QJB01_RS24620 (12598) | 12598..12945 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QJB01_RS24625 (12942) | 12942..13346 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QJB01_RS24630 (13426) | 13426..13764 | - | 339 | Protein_15 | IS3 family transposase IS629 | Transposase |
| QJB01_RS24635 (13848) | 13848..15356 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| QJB01_RS24640 (16029) | 16029..16768 | - | 740 | Protein_17 | IS3 family transposase IS629 | Transposase |
| QJB01_RS24645 (16794) | 16794..17099 | + | 306 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| QJB01_RS24650 (17622) | 17622..18797 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| QJB01_RS24655 (18866) | 18866..21127 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| QJB01_RS24660 (21296) | 21296..22072 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| QJB01_RS24665 (22080) | 22080..22955 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| QJB01_RS24670 (23329) | 23329..23954 | - | 626 | Protein_23 | replication initiation protein | - |
| QJB01_RS24675 (25406) | 25406..25741 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| QJB01_RS24680 (25870) | 25870..26217 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QJB01_RS24685 (26237) | 26237..26746 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| QJB01_RS24690 (26743) | 26743..27003 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| QJB01_RS24695 (27105) | 27105..27844 | + | 740 | Protein_28 | IS3 family transposase IS629 | Transposase |
| QJB01_RS24700 (28517) | 28517..28831 | + | 315 | Protein_29 | IS5 family transposase ISKpn26 | Transposase |
| QJB01_RS24705 (28832) | 28832..29005 | + | 174 | Protein_30 | IS5 family transposase ISKpn26 | Transposase |
| QJB01_RS24710 (29155) | 29155..29788 | - | 634 | Protein_31 | histidine-type phosphatase | - |
| QJB01_RS24715 (29910) | 29910..30395 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| QJB01_RS24720 (30420) | 30420..30905 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QJB01_RS24725 (30892) | 30892..31587 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QJB01_RS24730 (31592) | 31592..32722 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QJB01_RS24735 (32712) | 32712..33995 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QJB01_RS24740 (33998) | 33998..35377 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QJB01_RS24745 (35481) | 35481..36008 | - | 528 | WP_000178050.1 | iron transporter | - |
| QJB01_RS24750 (36049) | 36049..37935 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QJB01_RS24755 (38282) | 38282..39043 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QJB01_RS24760 (39280) | 39280..39786 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| QJB01_RS24765 (39878) | 39878..40582 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJB01_RS24770 (40642) | 40642..41004 | - | 363 | Protein_43 | IS5 family transposase IS903B | Transposase |
| QJB01_RS24775 (41039) | 41039..41914 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| QJB01_RS24780 (42228) | 42228..42932 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJB01_RS24785 (42998) | 42998..43543 | + | 546 | Protein_46 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJB01_RS24790 (43579) | 43579..43994 | - | 416 | Protein_47 | IS1-like element IS1B family transposase | - |
| QJB01_RS24795 (44243) | 44243..44644 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJB01_RS24800 (44577) | 44577..44834 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJB01_RS24805 (44927) | 44927..45580 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJB01_RS24810 (46520) | 46520..47377 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| QJB01_RS24815 (47370) | 47370..47444 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QJB01_RS24820 (47681) | 47681..47935 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QJB01_RS24825 (48232) | 48232..48366 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (48411) | 48411..48471 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (48411) | 48411..48471 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (48411) | 48411..48471 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (48411) | 48411..48471 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QJB01_RS24830 (48438) | 48438..48724 | - | 287 | Protein_55 | DUF2726 domain-containing protein | - |
| QJB01_RS24835 (48802) | 48802..50415 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJB01_RS24840 (50446) | 50446..50796 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJB01_RS24845 (50793) | 50793..51218 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJB01_RS24850 (51777) | 51777..51989 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QJB01_RS24855 (52120) | 52120..52680 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QJB01_RS24860 (52735) | 52735..53481 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QJB01_RS24865 (53501) | 53501..58771 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJB01_RS24870 (58771) | 58771..60933 | - | 2163 | WP_023144755.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJB01_RS24875 (60930) | 60930..61709 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| QJB01_RS24880 (61912) | 61912..62643 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| QJB01_RS24885 (62675) | 62675..63172 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| QJB01_RS24890 (63191) | 63191..66010 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJB01_RS24895 (66007) | 66007..67380 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| QJB01_RS24900 (67367) | 67367..67759 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| QJB01_RS24905 (67740) | 67740..68087 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| QJB01_RS24910 (68017) | 68017..68562 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJB01_RS24915 (68549) | 68549..68833 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJB01_RS24920 (68960) | 68960..69280 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| QJB01_RS24930 (70099) | 70099..70410 | - | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| QJB01_RS24935 (70415) | 70415..70777 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| QJB01_RS24940 (70811) | 70811..71038 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| QJB01_RS24945 (71126) | 71126..71803 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| QJB01_RS24950 (71937) | 71937..72320 | - | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QJB01_RS24955 (72663) | 72663..73253 | + | 591 | WP_001376243.1 | hypothetical protein | VF |
| QJB01_RS24960 (73550) | 73550..74371 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QJB01_RS24965 (74490) | 74490..74777 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| QJB01_RS24970 (74802) | 74802..75008 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| QJB01_RS24975 (75078) | 75078..75251 | + | 174 | Protein_84 | hypothetical protein | - |
| QJB01_RS24980 (75980) | 75980..77647 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| QJB01_RS24985 (77961) | 77961..78152 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QJB01_RS24990 (78149) | 78149..78571 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJB01_RS24995 (78618) | 78618..79043 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QJB01_RS25000 (79460) | 79460..80236 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QJB01_RS25005 (80287) | 80287..80805 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QJB01_RS25010 (80735) | 80735..80956 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QJB01_RS25015 (80957) | 80957..81640 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QJB01_RS25020 (81717) | 81717..82028 | - | 312 | WP_032143366.1 | hypothetical protein | - |
| QJB01_RS25025 (82025) | 82025..82927 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QJB01_RS25030 (83794) | 83794..84765 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJB01_RS25035 (84765) | 84765..85931 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QJB01_RS25040 (86519) | 86519..87274 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJB01_RS25045 (88048) | 88048..88854 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QJB01_RS25050 (88855) | 88855..89160 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJB01_RS25055 (89162) | 89162..89380 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJB01_RS25060 (90088) | 90088..91083 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QJB01_RS25065 (91126) | 91126..92019 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QJB01_RS25075 (92887) | 92887..94377 | - | 1491 | WP_171876359.1 | type I restriction-modification system subunit M | - |
| QJB01_RS25080 (94560) | 94560..94781 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QJB01_RS25085 (94781) | 94781..95161 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QJB01_RS25090 (95166) | 95166..95345 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QJB01_RS25095 (95373) | 95373..95651 | + | 279 | Protein_108 | pdcB | - |
| QJB01_RS25100 (95656) | 95656..96069 | + | 414 | Protein_109 | IS3 family transposase ISLad1 | Transposase |
| QJB01_RS25105 (96019) | 96019..96354 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| QJB01_RS25110 (96564) | 96564..97544 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| QJB01_RS25115 (97788) | 97788..99191 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| QJB01_RS25120 (99178) | 99178..100110 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QJB01_RS25125 (100219) | 100219..100548 | - | 330 | Protein_114 | TOBE domain-containing protein | - |
| QJB01_RS25135 (101409) | 101409..101567 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| QJB01_RS25140 (101726) | 101726..102697 | - | 972 | Protein_117 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|