MGE detailed information
MGE type: Conjugative plasmid MGE length: 61165 bp
Accession: NZ_CP124330 Location: 1..61165 Organism: Escherichia coli strain AVS0787 Replicon: plasmid pAVS0787-B
Accession: NZ_CP124330 Location: 1..61165 Organism: Escherichia coli strain AVS0787 Replicon: plasmid pAVS0787-B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP62_RS27045 (1) | 1..858 | + | 858 | WP_125093756.1 | incFII family plasmid replication initiator RepA | - |
| QJP62_RS27050 (1771) | 1771..2040 | + | 270 | WP_033802255.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QJP62_RS27055 (2040) | 2040..2318 | + | 279 | WP_250110461.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QJP62_RS27060 (2641) | 2641..3219 | + | 579 | WP_235802409.1 | hypothetical protein | - |
| QJP62_RS27065 (3573) | 3573..3908 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| QJP62_RS27070 (4246) | 4246..5226 | + | 981 | WP_033807854.1 | plasmid segregation protein ParM | - |
| QJP62_RS27075 (5229) | 5229..5651 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| QJP62_RS27080 (5675) | 5675..5965 | + | 291 | WP_236743670.1 | hypothetical protein | - |
| QJP62_RS27085 (6075) | 6075..6977 | + | 903 | WP_282517447.1 | DUF1281 domain-containing protein | - |
| QJP62_RS27090 (6974) | 6974..7285 | + | 312 | WP_249821863.1 | hypothetical protein | - |
| QJP62_RS27095 (7361) | 7361..8044 | + | 684 | WP_057695788.1 | DNA methylase | - |
| QJP62_RS27100 (8045) | 8045..8266 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| QJP62_RS27105 (8196) | 8196..8714 | + | 519 | WP_282517448.1 | DUF1380 family protein | - |
| QJP62_RS27110 (8759) | 8759..9529 | + | 771 | WP_033802143.1 | hypothetical protein | - |
| QJP62_RS27115 (9942) | 9942..10367 | + | 426 | WP_001198900.1 | antirestriction protein | - |
| QJP62_RS27120 (10414) | 10414..10836 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| QJP62_RS27125 (10833) | 10833..11024 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP62_RS27130 (11991) | 11991..12221 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| QJP62_RS27135 (12273) | 12273..13634 | + | 1362 | WP_021561178.1 | DUF3560 domain-containing protein | - |
| QJP62_RS27140 (13681) | 13681..14244 | + | 564 | WP_016240496.1 | class I SAM-dependent methyltransferase | - |
| QJP62_RS27145 (14330) | 14330..14791 | - | 462 | Protein_20 | hypothetical protein | - |
| QJP62_RS27150 (15093) | 15093..15620 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| QJP62_RS27155 (15678) | 15678..15911 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| QJP62_RS27160 (15972) | 15972..17936 | + | 1965 | WP_000117316.1 | ParB/RepB/Spo0J family partition protein | - |
| QJP62_RS27165 (18005) | 18005..18439 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| QJP62_RS27170 (18436) | 18436..19198 | + | 763 | Protein_25 | plasmid SOS inhibition protein A | - |
| QJP62_RS27175 (19176) | 19176..19355 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (19167) | 19167..19391 | + | 225 | NuclAT_0 | - | - |
| - (19167) | 19167..19391 | + | 225 | NuclAT_0 | - | - |
| - (19167) | 19167..19391 | + | 225 | NuclAT_0 | - | - |
| - (19167) | 19167..19391 | + | 225 | NuclAT_0 | - | - |
| QJP62_RS27180 (19377) | 19377..19526 | + | 150 | Protein_27 | plasmid maintenance protein Mok | - |
| QJP62_RS27185 (19468) | 19468..19593 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QJP62_RS27190 (19894) | 19894..20190 | - | 297 | Protein_29 | hypothetical protein | - |
| QJP62_RS27195 (20490) | 20490..20786 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| QJP62_RS27200 (20897) | 20897..21718 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| QJP62_RS27205 (22015) | 22015..22617 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| QJP62_RS27210 (22938) | 22938..23321 | + | 384 | WP_001151529.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QJP62_RS27215 (23513) | 23513..24160 | + | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| QJP62_RS27220 (24280) | 24280..24507 | + | 228 | WP_000589556.1 | conjugal transfer relaxosome protein TraY | - |
| QJP62_RS27225 (24541) | 24541..24900 | + | 360 | WP_001098994.1 | type IV conjugative transfer system pilin TraA | - |
| QJP62_RS27230 (24915) | 24915..25226 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| QJP62_RS27235 (25248) | 25248..25814 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| QJP62_RS27240 (25801) | 25801..26529 | + | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| QJP62_RS27245 (26529) | 26529..27956 | + | 1428 | WP_001530447.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QJP62_RS27250 (27946) | 27946..28536 | + | 591 | WP_000002784.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QJP62_RS27255 (28523) | 28523..28843 | + | 321 | WP_012881128.1 | conjugal transfer protein TrbD | - |
| QJP62_RS27260 (28840) | 28840..29355 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QJP62_RS27265 (29490) | 29490..29711 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| QJP62_RS27270 (29704) | 29704..30117 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| QJP62_RS27275 (30110) | 30110..30583 | + | 474 | WP_033807958.1 | hypothetical protein | - |
| QJP62_RS27280 (30682) | 30682..30900 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| QJP62_RS27285 (30928) | 30928..31275 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| QJP62_RS27290 (31401) | 31401..34031 | + | 2631 | WP_000069772.1 | type IV secretion system protein TraC | - |
| QJP62_RS27295 (34028) | 34028..34414 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| QJP62_RS27300 (34411) | 34411..35043 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| QJP62_RS27305 (35040) | 35040..36032 | + | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| QJP62_RS27310 (36062) | 36062..36367 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| QJP62_RS27315 (36376) | 36376..37014 | + | 639 | WP_012881126.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QJP62_RS27320 (37011) | 37011..38861 | + | 1851 | WP_181244303.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QJP62_RS27325 (38888) | 38888..39145 | + | 258 | WP_032241673.1 | conjugal transfer protein TrbE | - |
| QJP62_RS27330 (39138) | 39138..39881 | + | 744 | WP_001462109.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QJP62_RS27335 (39895) | 39895..40236 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| QJP62_RS27340 (40217) | 40217..40552 | - | 336 | WP_001620807.1 | hypothetical protein | - |
| QJP62_RS27345 (40633) | 40633..40917 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJP62_RS27350 (40904) | 40904..41449 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJP62_RS27355 (41379) | 41379..41726 | + | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| QJP62_RS27360 (41707) | 41707..42099 | + | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| QJP62_RS27365 (42086) | 42086..43459 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| QJP62_RS27370 (43456) | 43456..46281 | + | 2826 | WP_012881124.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP62_RS27375 (46278) | 46278..46787 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| QJP62_RS27380 (46801) | 46801..47532 | + | 732 | WP_012881123.1 | conjugal transfer complement resistance protein TraT | - |
| QJP62_RS27385 (47735) | 47735..48472 | + | 738 | WP_012881122.1 | hypothetical protein | - |
| QJP62_RS27390 (48523) | 48523..50712 | + | 2190 | WP_282517444.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJP62_RS27395 (50712) | 50712..55982 | + | 5271 | WP_282517445.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJP62_RS27400 (56002) | 56002..56748 | + | 747 | WP_032188604.1 | conjugal transfer pilus acetylase TraX | - |
| QJP62_RS27405 (56803) | 56803..57363 | + | 561 | WP_282517446.1 | fertility inhibition protein FinO | - |
| QJP62_RS27410 (57495) | 57495..57707 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| QJP62_RS27415 (57953) | 57953..58414 | + | 462 | WP_238061707.1 | thermonuclease family protein | - |
| QJP62_RS27420 (58460) | 58460..58669 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| QJP62_RS27425 (58707) | 58707..59297 | + | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| QJP62_RS27430 (59452) | 59452..59925 | + | 474 | WP_016240489.1 | hypothetical protein | - |
| - (60068) | 60068..60127 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (60068) | 60068..60127 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (60068) | 60068..60127 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (60068) | 60068..60127 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| QJP62_RS27435 (60172) | 60172..60321 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| QJP62_RS27440 (60606) | 60606..60854 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| QJP62_RS27445 (60969) | 60969..61153 | + | 185 | Protein_80 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|