MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 84132 bp
Accession: NZ_CP123031 Location: 1..84132 Organism: Escherichia coli strain 20-20 Replicon: plasmid p20-20P2
Accession: NZ_CP123031 Location: 1..84132 Organism: Escherichia coli strain 20-20 Replicon: plasmid p20-20P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEN57_RS23640 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QEN57_RS23645 (1263) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QEN57_RS23650 (2124) | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| QEN57_RS23655 (2373) | 2373..2662 | - | 290 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QEN57_RS23660 (2649) | 2649..2917 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| QEN57_RS23665 (3449) | 3449..4321 | + | 873 | WP_104989445.1 | hypothetical protein | - |
| QEN57_RS23670 (4355) | 4355..5052 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| QEN57_RS23675 (5068) | 5068..5187 | + | 120 | Protein_7 | transcriptional regulator | - |
| QEN57_RS23680 (5165) | 5165..5788 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| QEN57_RS23685 (5870) | 5870..7075 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| QEN57_RS23690 (7188) | 7188..7781 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| QEN57_RS23695 (7915) | 7915..8619 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN57_RS23700 (8673) | 8673..9038 | - | 366 | Protein_12 | chromate transporter | - |
| QEN57_RS23705 (9194) | 9194..9397 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| QEN57_RS23710 (9525) | 9525..10364 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QEN57_RS23715 (10358) | 10358..10705 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QEN57_RS23720 (10822) | 10822..11660 | - | 839 | Protein_16 | Streptomycin 3''-adenylyltransferase | ARG |
| QEN57_RS23725 (11666) | 11666..11956 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QEN57_RS23730 (12068) | 12068..12565 | - | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
| QEN57_RS23735 (12710) | 12710..13576 | + | 867 | Protein_19 | IS91 family transposase ISAzo26 | Transposase |
| QEN57_RS23740 (13631) | 13631..14335 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN57_RS23745 (14500) | 14500..14793 | + | 294 | Protein_21 | IS30 family transposase | - |
| QEN57_RS23750 (14894) | 14894..15706 | + | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| QEN57_RS23755 (15710) | 15710..16075 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| QEN57_RS23760 (16080) | 16080..16718 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| QEN57_RS23765 (16729) | 16729..17286 | - | 558 | Protein_25 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| QEN57_RS23770 (17386) | 17386..17760 | - | 375 | Protein_26 | protein-disulfide reductase DsbD family protein | - |
| QEN57_RS23775 (18073) | 18073..19614 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| QEN57_RS23780 (20019) | 20019..20858 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QEN57_RS23785 (20852) | 20852..21199 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QEN57_RS23790 (21316) | 21316..22154 | - | 839 | Protein_30 | Streptomycin 3''-adenylyltransferase | ARG |
| QEN57_RS23795 (22160) | 22160..22450 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QEN57_RS23800 (22562) | 22562..23059 | - | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
| QEN57_RS23805 (23204) | 23204..24217 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| QEN57_RS23810 (24420) | 24420..24728 | + | 309 | Protein_34 | EAL domain-containing protein | - |
| QEN57_RS23815 (24619) | 24619..25323 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN57_RS23820 (25387) | 25387..25725 | + | 339 | Protein_36 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEN57_RS23825 (25908) | 25908..26768 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QEN57_RS23830 (26851) | 26851..27555 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN57_RS23835 (27610) | 27610..27681 | + | 72 | Protein_39 | hypothetical protein | - |
| QEN57_RS23840 (27937) | 27937..28812 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| QEN57_RS23845 (28859) | 28859..29152 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| QEN57_RS23850 (29217) | 29217..31436 | + | 2220 | Protein_42 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QEN57_RS23855 (31513) | 31513..32217 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN57_RS23860 (32271) | 32271..32711 | - | 441 | Protein_44 | CatB-related O-acetyltransferase | - |
| QEN57_RS23865 (32849) | 32849..33679 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| QEN57_RS23870 (33810) | 33810..34364 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| QEN57_RS23875 (34508) | 34508..35212 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN57_RS23880 (35284) | 35284..37620 | + | 2337 | Protein_48 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| QEN57_RS23885 (37757) | 37757..38158 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QEN57_RS23890 (38091) | 38091..38348 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QEN57_RS23895 (38441) | 38441..39094 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QEN57_RS23900 (40034) | 40034..40891 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| QEN57_RS23905 (40884) | 40884..40958 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QEN57_RS23910 (41320) | 41320..42861 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| QEN57_RS23915 (42876) | 42876..43622 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| QEN57_RS23920 (43782) | 43782..44036 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QEN57_RS23925 (44333) | 44333..44467 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (44512) | 44512..44572 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44512) | 44512..44572 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44512) | 44512..44572 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44512) | 44512..44572 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QEN57_RS23930 (44539) | 44539..44825 | - | 287 | Protein_58 | DUF2726 domain-containing protein | - |
| QEN57_RS23935 (45338) | 45338..45550 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QEN57_RS23940 (45681) | 45681..46241 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QEN57_RS23945 (46296) | 46296..47042 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QEN57_RS23950 (47062) | 47062..49455 | - | 2394 | Protein_62 | Multifunctional conjugation protein TraI | Relaxase |
| QEN57_RS23955 (49449) | 49449..50507 | - | 1059 | Protein_63 | DUF3560 domain-containing protein | - |
| QEN57_RS23960 (50559) | 50559..50789 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QEN57_RS23965 (51824) | 51824..52015 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QEN57_RS23970 (52012) | 52012..52433 | - | 422 | Protein_66 | DUF1380 family protein | - |
| QEN57_RS23975 (52480) | 52480..52905 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QEN57_RS23980 (53322) | 53322..54098 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QEN57_RS23985 (54149) | 54149..54667 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QEN57_RS23990 (54597) | 54597..54818 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QEN57_RS23995 (54819) | 54819..55502 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QEN57_RS24000 (55579) | 55579..55890 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| QEN57_RS24005 (55887) | 55887..56789 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QEN57_RS24010 (57656) | 57656..58627 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QEN57_RS24015 (58627) | 58627..59793 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QEN57_RS24020 (60381) | 60381..61136 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QEN57_RS24025 (61910) | 61910..62716 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QEN57_RS24030 (62717) | 62717..63022 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QEN57_RS24035 (63024) | 63024..63242 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QEN57_RS24040 (63876) | 63876..64073 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| QEN57_RS24045 (64070) | 64070..64354 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| QEN57_RS24050 (64374) | 64374..65507 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| QEN57_RS24055 (65770) | 65770..68889 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| QEN57_RS24060 (69196) | 69196..69426 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QEN57_RS24065 (69423) | 69423..69839 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QEN57_RS24070 (70001) | 70001..72139 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| QEN57_RS24075 (72604) | 72604..73599 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QEN57_RS24080 (73642) | 73642..74535 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QEN57_RS24090 (75583) | 75583..78699 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QEN57_RS24095 (78821) | 78821..80092 | - | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
| QEN57_RS24100 (80089) | 80089..81645 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| QEN57_RS24105 (81828) | 81828..82049 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QEN57_RS24110 (82049) | 82049..82429 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| QEN57_RS24115 (82434) | 82434..82613 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QEN57_RS24120 (82641) | 82641..82919 | + | 279 | Protein_96 | pdcB | - |
| QEN57_RS24125 (82924) | 82924..83337 | + | 414 | Protein_97 | IS3 family transposase ISLad1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|