MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 83900 bp
Accession: NZ_CP123019 Location: 1..83900 Organism: Escherichia coli strain 19-7 Replicon: plasmid p19-7P2
Accession: NZ_CP123019 Location: 1..83900 Organism: Escherichia coli strain 19-7 Replicon: plasmid p19-7P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEN55_RS23890 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QEN55_RS23895 (1263) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QEN55_RS23900 (2124) | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| QEN55_RS23905 (2373) | 2373..2662 | - | 290 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QEN55_RS23910 (2649) | 2649..2917 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| QEN55_RS23915 (3449) | 3449..4321 | + | 873 | WP_104989445.1 | hypothetical protein | - |
| QEN55_RS23920 (4355) | 4355..5052 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| QEN55_RS23925 (5068) | 5068..5187 | + | 120 | Protein_7 | transcriptional regulator | - |
| QEN55_RS23930 (5165) | 5165..5788 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| QEN55_RS23935 (5870) | 5870..7075 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| QEN55_RS23940 (7188) | 7188..7781 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| QEN55_RS23945 (7915) | 7915..8619 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN55_RS23950 (8673) | 8673..9038 | - | 366 | Protein_12 | chromate transporter | - |
| QEN55_RS23955 (9194) | 9194..9397 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| QEN55_RS23960 (9525) | 9525..10364 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QEN55_RS23965 (10358) | 10358..10705 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QEN55_RS23970 (10822) | 10822..11660 | - | 839 | Protein_16 | Streptomycin 3''-adenylyltransferase | ARG |
| QEN55_RS23975 (11666) | 11666..11956 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QEN55_RS23980 (12068) | 12068..12565 | - | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
| QEN55_RS23985 (12710) | 12710..13576 | + | 867 | Protein_19 | IS91 family transposase ISAzo26 | Transposase |
| QEN55_RS23990 (13631) | 13631..14335 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN55_RS23995 (14500) | 14500..14793 | + | 294 | Protein_21 | IS30 family transposase ISAba125 | Transposase |
| QEN55_RS24000 (14894) | 14894..15706 | + | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| QEN55_RS24005 (15710) | 15710..16075 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| QEN55_RS24010 (16080) | 16080..16718 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| QEN55_RS24015 (16729) | 16729..17286 | - | 558 | Protein_25 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| QEN55_RS24020 (17386) | 17386..17760 | - | 375 | Protein_26 | protein-disulfide reductase DsbD family protein | - |
| QEN55_RS24025 (18073) | 18073..19614 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| QEN55_RS24030 (20019) | 20019..20858 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QEN55_RS24035 (20852) | 20852..21199 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QEN55_RS24040 (21405) | 21405..22193 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| QEN55_RS24045 (22324) | 22324..22797 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| QEN55_RS24050 (22955) | 22955..23969 | + | 1015 | Protein_32 | class 1 integron integrase IntI1 | - |
| QEN55_RS24055 (24172) | 24172..24480 | + | 309 | Protein_33 | EAL domain-containing protein | - |
| QEN55_RS24060 (24371) | 24371..25077 | - | 707 | Protein_34 | IS6 family transposase IS15DI | Transposase |
| QEN55_RS24065 (25141) | 25141..25478 | + | 338 | Protein_35 | recombinase family protein | - |
| QEN55_RS24070 (25661) | 25661..26521 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QEN55_RS24075 (26604) | 26604..27307 | + | 704 | Protein_37 | IS6 family transposase IS15DII | Transposase |
| QEN55_RS24080 (27362) | 27362..27433 | + | 72 | Protein_38 | hypothetical protein | - |
| QEN55_RS24085 (27689) | 27689..28564 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| QEN55_RS24090 (28611) | 28611..28904 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| QEN55_RS24095 (28969) | 28969..31188 | + | 2220 | Protein_41 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QEN55_RS24100 (31265) | 31265..31969 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN55_RS24105 (32023) | 32023..32463 | - | 441 | Protein_43 | CatB-related O-acetyltransferase | - |
| QEN55_RS24110 (32601) | 32601..33431 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| QEN55_RS24115 (33562) | 33562..34116 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| QEN55_RS24120 (34260) | 34260..34964 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QEN55_RS24125 (35036) | 35036..37372 | + | 2337 | Protein_47 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| QEN55_RS24130 (37509) | 37509..37910 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QEN55_RS24135 (37843) | 37843..38100 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QEN55_RS24140 (38193) | 38193..38846 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QEN55_RS24145 (39786) | 39786..40643 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| QEN55_RS24150 (40636) | 40636..40710 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QEN55_RS24155 (41072) | 41072..42613 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| QEN55_RS24160 (42628) | 42628..43374 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| QEN55_RS24165 (43534) | 43534..43788 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QEN55_RS24170 (44085) | 44085..44219 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (44264) | 44264..44324 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44264) | 44264..44324 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44264) | 44264..44324 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44264) | 44264..44324 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QEN55_RS24175 (44291) | 44291..44577 | - | 287 | Protein_57 | DUF2726 domain-containing protein | - |
| QEN55_RS24180 (45090) | 45090..45302 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QEN55_RS24185 (45433) | 45433..45993 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QEN55_RS24190 (46048) | 46048..46794 | - | 747 | WP_000205736.1 | conjugal transfer pilus acetylase TraX | - |
| QEN55_RS24195 (46814) | 46814..49207 | - | 2394 | Protein_61 | Multifunctional conjugation protein TraI | Relaxase |
| QEN55_RS24200 (49201) | 49201..50259 | - | 1059 | Protein_62 | DUF3560 domain-containing protein | - |
| QEN55_RS24205 (50311) | 50311..50541 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QEN55_RS24210 (51052) | 51052..51300 | + | 249 | WP_071556315.1 | hypothetical protein | - |
| QEN55_RS24215 (51579) | 51579..51770 | - | 192 | WP_001027511.1 | hypothetical protein | - |
| QEN55_RS24220 (51767) | 51767..52189 | - | 423 | WP_000271739.1 | DUF1380 family protein | - |
| QEN55_RS24225 (52236) | 52236..52661 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QEN55_RS24230 (53078) | 53078..53854 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QEN55_RS24235 (53905) | 53905..54423 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QEN55_RS24240 (54353) | 54353..54574 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QEN55_RS24245 (54575) | 54575..55258 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QEN55_RS24250 (55335) | 55335..55646 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| QEN55_RS24255 (55643) | 55643..56545 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QEN55_RS24260 (57412) | 57412..58383 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QEN55_RS24265 (58383) | 58383..59549 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QEN55_RS24270 (60137) | 60137..60892 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QEN55_RS24275 (61666) | 61666..62472 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QEN55_RS24280 (62473) | 62473..62778 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QEN55_RS24285 (62780) | 62780..62998 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QEN55_RS24290 (63632) | 63632..63829 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| QEN55_RS24295 (63826) | 63826..64110 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| QEN55_RS24300 (64130) | 64130..65263 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| QEN55_RS24305 (65526) | 65526..68645 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| QEN55_RS24310 (68952) | 68952..69182 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QEN55_RS24315 (69179) | 69179..69595 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QEN55_RS24320 (69757) | 69757..71895 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| QEN55_RS24325 (72360) | 72360..73355 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QEN55_RS24330 (73398) | 73398..74291 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QEN55_RS24340 (75339) | 75339..78455 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QEN55_RS24345 (78577) | 78577..79860 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| QEN55_RS24350 (79857) | 79857..81413 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| QEN55_RS24355 (81596) | 81596..81817 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QEN55_RS24360 (81817) | 81817..82197 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| QEN55_RS24365 (82202) | 82202..82381 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QEN55_RS24370 (82409) | 82409..82687 | + | 279 | Protein_96 | pdcB | - |
| QEN55_RS24375 (82692) | 82692..83105 | + | 414 | Protein_97 | integrase core domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|