MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 107858 bp
Accession: NZ_CP123014 Location: 1..107858 Organism: Escherichia coli strain 18-4 Replicon: plasmid p18-4P1
Accession: NZ_CP123014 Location: 1..107858 Organism: Escherichia coli strain 18-4 Replicon: plasmid p18-4P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEN56_RS23465 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QEN56_RS23470 (1263) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QEN56_RS23475 (2124) | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| QEN56_RS23480 (2373) | 2373..2662 | - | 290 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QEN56_RS23485 (2649) | 2649..2917 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| QEN56_RS23490 (3449) | 3449..4321 | + | 873 | WP_104989445.1 | hypothetical protein | - |
| QEN56_RS23495 (4355) | 4355..5052 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| QEN56_RS23500 (5068) | 5068..5187 | + | 120 | Protein_7 | transcriptional regulator | - |
| QEN56_RS23505 (5165) | 5165..5788 | - | 624 | WP_000088605.1 | hypothetical protein | VF |
| QEN56_RS23510 (5870) | 5870..7075 | + | 1206 | WP_001089068.1 | Multidrug resistance protein MdtG | ARG |
| QEN56_RS23515 (7188) | 7188..7781 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| QEN56_RS23520 (7915) | 7915..8619 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN56_RS23525 (8673) | 8673..9038 | - | 366 | Protein_12 | chromate transporter | - |
| QEN56_RS23530 (9194) | 9194..9397 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| QEN56_RS23535 (9525) | 9525..10364 | - | 840 | WP_000259031.1 | hypothetical protein | ARG |
| QEN56_RS23540 (10358) | 10358..10705 | - | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| QEN56_RS23545 (10822) | 10822..11660 | - | 839 | Protein_16 | hypothetical protein | ARG |
| QEN56_RS23550 (11666) | 11666..11956 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QEN56_RS23555 (12068) | 12068..12565 | - | 498 | WP_001083725.1 | hypothetical protein | ARG |
| QEN56_RS23560 (12710) | 12710..13576 | + | 867 | Protein_19 | class 1 integron integrase IntI1 | - |
| QEN56_RS23565 (13631) | 13631..14335 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN56_RS23570 (14500) | 14500..14793 | + | 294 | Protein_21 | IS30 family transposase ISAba125 | Transposase |
| QEN56_RS23575 (14894) | 14894..15706 | + | 813 | WP_023408309.1 | hypothetical protein | ARG |
| QEN56_RS23580 (15710) | 15710..16075 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| QEN56_RS23585 (16080) | 16080..16718 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| QEN56_RS23590 (16729) | 16729..17286 | - | 558 | Protein_25 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| QEN56_RS23595 (17386) | 17386..17760 | - | 375 | Protein_26 | protein-disulfide reductase DsbD family protein | - |
| QEN56_RS23600 (18073) | 18073..19614 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| QEN56_RS23605 (20019) | 20019..20858 | - | 840 | WP_000259031.1 | hypothetical protein | ARG |
| QEN56_RS23610 (20852) | 20852..21199 | - | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| QEN56_RS23615 (21316) | 21316..22154 | - | 839 | Protein_30 | hypothetical protein | ARG |
| QEN56_RS23620 (22160) | 22160..22450 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QEN56_RS23625 (22562) | 22562..23059 | - | 498 | WP_001083725.1 | hypothetical protein | ARG |
| QEN56_RS23630 (23204) | 23204..24070 | + | 867 | Protein_33 | class 1 integron integrase IntI1 | - |
| QEN56_RS23635 (24125) | 24125..24829 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN56_RS23640 (24988) | 24988..25269 | - | 282 | Protein_35 | transposase zinc-binding domain-containing protein | - |
| QEN56_RS23645 (25416) | 25416..26276 | - | 861 | WP_000027057.1 | hypothetical protein | ARG |
| QEN56_RS23650 (26459) | 26459..26650 | - | 192 | Protein_37 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEN56_RS23655 (26714) | 26714..27418 | + | 705 | WP_001067855.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEN56_RS23660 (27473) | 27473..28318 | - | 846 | Protein_39 | IS4 family transposase IS10R | Transposase |
| QEN56_RS23665 (28428) | 28428..29390 | - | 963 | Protein_40 | IS4 family transposase IS10R | Transposase |
| QEN56_RS23670 (29533) | 29533..30393 | + | 861 | WP_000557454.1 | hypothetical protein | ARG |
| QEN56_RS23675 (30406) | 30406..30948 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| QEN56_RS23680 (31430) | 31430..31621 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| QEN56_RS23685 (31645) | 31645..31872 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| QEN56_RS23690 (31923) | 31923..33050 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| QEN56_RS23695 (33087) | 33087..33791 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN56_RS23700 (33913) | 33913..34827 | + | 915 | WP_023063803.1 | hypothetical protein | ARG |
| QEN56_RS23705 (34824) | 34824..36062 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| QEN56_RS23710 (36062) | 36062..36646 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| QEN56_RS23715 (37139) | 37139..37903 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| QEN56_RS23720 (38043) | 38043..38747 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN56_RS23725 (38808) | 38808..39644 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QEN56_RS23730 (39644) | 39644..40447 | - | 804 | WP_001082319.1 | hypothetical protein | ARG |
| QEN56_RS23735 (40508) | 40508..41323 | - | 816 | WP_001043265.1 | hypothetical protein | ARG |
| QEN56_RS23740 (41631) | 41631..42482 | - | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| QEN56_RS23745 (42469) | 42469..43188 | - | 720 | Protein_56 | helicase RepA family protein | - |
| QEN56_RS23750 (43238) | 43238..43942 | - | 705 | WP_001067855.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| QEN56_RS23755 (43997) | 43997..44500 | + | 504 | Protein_58 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| QEN56_RS23760 (44725) | 44725..45366 | - | 642 | WP_000134999.1 | MBL fold metallo-hydrolase | - |
| QEN56_RS23765 (45606) | 45606..45926 | - | 321 | Protein_60 | IS1380 family transposase ISEcp1 | Transposase |
| QEN56_RS23770 (45939) | 45939..46499 | + | 561 | WP_000147567.1 | recombinase family protein | - |
| QEN56_RS23775 (46502) | 46502..48973 | + | 2472 | Protein_62 | Tn3-like element TnAs3 family transposase | - |
| QEN56_RS23780 (49120) | 49120..49980 | - | 861 | WP_000027057.1 | hypothetical protein | ARG |
| QEN56_RS23785 (50163) | 50163..50501 | - | 339 | Protein_64 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEN56_RS23790 (50565) | 50565..51269 | + | 705 | WP_001067855.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEN56_RS23795 (51324) | 51324..51395 | + | 72 | Protein_66 | hypothetical protein | - |
| QEN56_RS23800 (51651) | 51651..52526 | + | 876 | WP_000239590.1 | hypothetical protein | ARG |
| QEN56_RS23805 (52573) | 52573..52866 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| QEN56_RS23810 (52931) | 52931..55150 | + | 2220 | Protein_69 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QEN56_RS23815 (55227) | 55227..55931 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN56_RS23820 (55985) | 55985..56425 | - | 441 | Protein_71 | CatB-related O-acetyltransferase | - |
| QEN56_RS23825 (56563) | 56563..57393 | - | 831 | WP_001334766.1 | hypothetical protein | ARG |
| QEN56_RS23830 (57524) | 57524..58078 | - | 555 | WP_063840321.1 | hypothetical protein | ARG |
| QEN56_RS23835 (58222) | 58222..58926 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN56_RS23840 (58998) | 58998..61334 | + | 2337 | Protein_75 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| QEN56_RS23845 (61471) | 61471..61872 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QEN56_RS23850 (61805) | 61805..62062 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QEN56_RS23855 (62155) | 62155..62808 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QEN56_RS23860 (63748) | 63748..64605 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| QEN56_RS23865 (64598) | 64598..64672 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QEN56_RS23870 (65034) | 65034..66575 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| QEN56_RS23875 (66590) | 66590..67336 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| QEN56_RS23880 (67496) | 67496..67750 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QEN56_RS23885 (68047) | 68047..68181 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (68226) | 68226..68286 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (68226) | 68226..68286 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (68226) | 68226..68286 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (68226) | 68226..68286 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QEN56_RS23890 (68253) | 68253..68539 | - | 287 | Protein_85 | DUF2726 domain-containing protein | - |
| QEN56_RS23895 (69052) | 69052..69264 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QEN56_RS23900 (69395) | 69395..69955 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QEN56_RS23905 (70010) | 70010..70756 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QEN56_RS23910 (70776) | 70776..73169 | - | 2394 | Protein_89 | ATP-dependent RecD-like DNA helicase | Relaxase |
| QEN56_RS23915 (73163) | 73163..74221 | - | 1059 | Protein_90 | DUF3560 domain-containing protein | - |
| QEN56_RS23920 (74273) | 74273..74503 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QEN56_RS23925 (75538) | 75538..75729 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QEN56_RS23930 (75726) | 75726..76147 | - | 422 | Protein_93 | DUF1380 family protein | - |
| QEN56_RS23935 (76194) | 76194..76619 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QEN56_RS23940 (77036) | 77036..77812 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QEN56_RS23945 (77863) | 77863..78381 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QEN56_RS23950 (78311) | 78311..78532 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QEN56_RS23955 (78533) | 78533..79216 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QEN56_RS23960 (79293) | 79293..79604 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| QEN56_RS23965 (79601) | 79601..80503 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QEN56_RS23970 (81370) | 81370..82341 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QEN56_RS23975 (82341) | 82341..83507 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QEN56_RS23980 (84095) | 84095..84850 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QEN56_RS23985 (85624) | 85624..86430 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QEN56_RS23990 (86431) | 86431..86736 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QEN56_RS23995 (86738) | 86738..86956 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QEN56_RS24000 (87590) | 87590..87787 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| QEN56_RS24005 (87784) | 87784..88068 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| QEN56_RS24010 (88088) | 88088..89221 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| QEN56_RS24015 (89484) | 89484..92603 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| QEN56_RS24020 (92910) | 92910..93140 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QEN56_RS24025 (93137) | 93137..93553 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QEN56_RS24030 (93715) | 93715..95853 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| QEN56_RS24035 (96318) | 96318..97313 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QEN56_RS24040 (97356) | 97356..98249 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QEN56_RS24050 (99297) | 99297..102413 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QEN56_RS24055 (102535) | 102535..103818 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| QEN56_RS24060 (103815) | 103815..105371 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| QEN56_RS24065 (105554) | 105554..105775 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QEN56_RS24070 (105775) | 105775..106155 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| QEN56_RS24075 (106160) | 106160..106339 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QEN56_RS24080 (106367) | 106367..106645 | + | 279 | Protein_123 | pdcB | - |
| QEN56_RS24085 (106650) | 106650..107063 | + | 414 | Protein_124 | IS3 family transposase ISLad1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|