MGE detailed information
MGE type: Conjugative plasmid MGE length: 112141 bp
Accession: NZ_CP122871 Location: 1..112141 Organism: Escherichia coli strain ETEC1721 Replicon: plasmid unnamed3
Accession: NZ_CP122871 Location: 1..112141 Organism: Escherichia coli strain ETEC1721 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX04_RS23540 (1) | 1..744 | + | 744 | WP_000205703.1 | conjugal transfer pilus acetylase TraX | - |
| QDX04_RS23545 (799) | 799..1359 | + | 561 | WP_000139309.1 | fertility inhibition protein FinO | - |
| QDX04_RS23550 (1495) | 1495..1710 | + | 216 | WP_032166857.1 | hypothetical protein | - |
| QDX04_RS23555 (1954) | 1954..2040 | + | 87 | Protein_3 | endonuclease | - |
| QDX04_RS23560 (2130) | 2130..5096 | - | 2967 | WP_282843545.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QDX04_RS23565 (5100) | 5100..5660 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| QDX04_RS23570 (5970) | 5970..7547 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| QDX04_RS23575 (7866) | 7866..8177 | - | 312 | WP_000765906.1 | hypothetical protein | - |
| - (8473) | 8473..8534 | - | 62 | NuclAT_1 | - | - |
| - (8473) | 8473..8534 | - | 62 | NuclAT_1 | - | - |
| - (8473) | 8473..8534 | - | 62 | NuclAT_1 | - | - |
| - (8473) | 8473..8534 | - | 62 | NuclAT_1 | - | - |
| QDX04_RS23585 (9839) | 9839..9979 | + | 141 | WP_064717426.1 | Hok/Gef family protein | - |
| QDX04_RS23590 (10259) | 10259..10516 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| QDX04_RS23595 (10750) | 10750..10824 | + | 75 | WP_032319616.1 | RepA leader peptide Tap | - |
| QDX04_RS23600 (10817) | 10817..11839 | + | 1023 | WP_000840938.1 | plasmid replication initiator RepA | - |
| QDX04_RS23605 (12755) | 12755..13024 | + | 270 | WP_000079930.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDX04_RS23610 (13024) | 13024..13302 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDX04_RS23615 (13348) | 13348..14077 | + | 730 | Protein_15 | 3'-5' exonuclease | - |
| QDX04_RS23620 (14084) | 14084..14392 | - | 309 | Protein_16 | integrase core domain-containing protein | - |
| QDX04_RS23625 (14409) | 14409..15485 | - | 1077 | WP_039022834.1 | IS110 family transposase ISEc21 | Transposase |
| QDX04_RS23630 (15767) | 15767..16626 | - | 860 | Protein_18 | IS3 family transposase | - |
| QDX04_RS23635 (16740) | 16740..17135 | - | 396 | Protein_19 | ATP-binding protein | - |
| QDX04_RS23640 (17483) | 17483..17857 | - | 375 | WP_015675362.1 | Heat-labile enterotoxin B chain | VF |
| QDX04_RS23645 (17854) | 17854..18630 | - | 777 | WP_042634421.1 | Heat-labile enterotoxin A chain | VF |
| QDX04_RS23650 (18904) | 18904..19108 | - | 205 | Protein_22 | IS110 family transposase | - |
| QDX04_RS23655 (19497) | 19497..20210 | + | 714 | WP_001424997.1 | hypothetical protein | - |
| QDX04_RS23660 (20422) | 20422..21393 | + | 972 | WP_001078349.1 | IS481 family transposase ISEc18 | Transposase |
| QDX04_RS23665 (21485) | 21485..22128 | - | 644 | Protein_25 | DDE-type integrase/transposase/recombinase | - |
| QDX04_RS23670 (22154) | 22154..22733 | + | 580 | Protein_26 | IS256 family transposase | - |
| QDX04_RS23675 (23210) | 23210..23425 | + | 216 | WP_000739296.1 | heat-stable enterotoxin ST-II | - |
| QDX04_RS23680 (23813) | 23813..24923 | + | 1111 | WP_096932382.1 | IS3 family transposase | - |
| QDX04_RS23685 (25039) | 25039..26574 | - | 1536 | WP_001424993.1 | hypothetical protein | VF |
| QDX04_RS23690 (26642) | 26642..26743 | - | 102 | Protein_30 | restriction endonuclease subunit M | - |
| QDX04_RS23695 (26871) | 26871..27610 | - | 740 | Protein_31 | IS110 family transposase | - |
| QDX04_RS23700 (27837) | 27837..36932 | - | 9096 | WP_282843546.1 | Ig-like domain-containing protein | - |
| QDX04_RS23705 (37063) | 37063..39006 | - | 1944 | WP_096932383.1 | ATP-binding cassette domain-containing protein | - |
| QDX04_RS23710 (39009) | 39009..39503 | - | 495 | WP_063119460.1 | hypothetical protein | - |
| QDX04_RS23715 (39493) | 39493..40674 | - | 1182 | WP_151411300.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| QDX04_RS23720 (40752) | 40752..41987 | - | 1236 | WP_063119458.1 | TolC family protein | - |
| QDX04_RS23725 (41984) | 41984..42772 | - | 789 | WP_089637796.1 | hypothetical protein | - |
| QDX04_RS23730 (42772) | 42772..43239 | - | 468 | WP_063119456.1 | hypothetical protein | - |
| QDX04_RS23735 (43243) | 43243..43560 | - | 318 | WP_086200691.1 | hypothetical protein | VF |
| QDX04_RS23740 (43747) | 43747..44598 | - | 852 | WP_096932384.1 | Right origin-binding protein | VF |
| QDX04_RS23745 (44808) | 44808..45157 | - | 350 | Protein_41 | integrase core domain-containing protein | - |
| QDX04_RS23750 (45217) | 45217..45895 | - | 679 | Protein_42 | IS3 family transposase ISKpn38 | Transposase |
| QDX04_RS23755 (45990) | 45990..46753 | + | 764 | Protein_43 | IS3 family transposase IS2 | Transposase |
| QDX04_RS23760 (46781) | 46781..47448 | - | 668 | Protein_44 | IS3 family transposase ISKpn38 | Transposase |
| QDX04_RS23765 (47526) | 47526..47699 | - | 174 | Protein_45 | IS3 family transposase | - |
| QDX04_RS23770 (47898) | 47898..48595 | - | 698 | Protein_46 | IS21 family transposase IS100 | Transposase |
| QDX04_RS23775 (48592) | 48592..49601 | - | 1010 | Protein_47 | IS21 family transposase IS100kyp | Transposase |
| QDX04_RS23780 (49654) | 49654..50753 | + | 1100 | Protein_48 | IS3 family transposase IS3F | Transposase |
| QDX04_RS23785 (51100) | 51100..51423 | - | 324 | WP_230909587.1 | Transcriptional repressor MprA | VF |
| QDX04_RS23790 (51472) | 51472..51600 | - | 129 | Protein_50 | Transcriptional repressor MprA | VF |
| QDX04_RS23795 (52114) | 52114..52356 | - | 243 | WP_074156120.1 | toxin-activating lysine-acyltransferase | - |
| QDX04_RS23800 (52807) | 52807..52916 | + | 110 | Protein_52 | IS5/IS1182 family transposase | - |
| QDX04_RS23805 (53439) | 53439..53689 | + | 251 | Protein_53 | type II toxin-antitoxin system ParD family antitoxin | - |
| QDX04_RS23810 (53676) | 53676..53970 | + | 295 | Protein_54 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDX04_RS23815 (54333) | 54333..55073 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QDX04_RS23820 (55358) | 55358..56335 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QDX04_RS23825 (57015) | 57015..57260 | - | 246 | Protein_57 | integrase core domain-containing protein | - |
| QDX04_RS23830 (57262) | 57262..57549 | - | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDX04_RS23835 (57546) | 57546..57797 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QDX04_RS23840 (57970) | 57970..58182 | - | 213 | WP_000402944.1 | hypothetical protein | - |
| QDX04_RS23845 (58556) | 58556..59761 | + | 1206 | WP_000817634.1 | Plasmid partition protein A | VF |
| QDX04_RS23850 (59758) | 59758..60720 | + | 963 | WP_000756327.1 | ParB family protein | - |
| QDX04_RS23855 (60954) | 60954..61731 | + | 778 | Protein_63 | transposase DNA-binding-containing protein | - |
| QDX04_RS23860 (61861) | 61861..61944 | - | 84 | Protein_64 | DUF4113 domain-containing protein | - |
| QDX04_RS23865 (61946) | 61946..62474 | + | 529 | Protein_65 | DUF1281 domain-containing protein | - |
| QDX04_RS23870 (62471) | 62471..62782 | + | 312 | WP_001309256.1 | hypothetical protein | - |
| QDX04_RS23875 (62859) | 62859..62930 | + | 72 | Protein_67 | hypothetical protein | - |
| QDX04_RS23880 (63012) | 63012..64712 | - | 1701 | WP_000125555.1 | group II intron reverse transcriptase/maturase | - |
| QDX04_RS23885 (65334) | 65334..65945 | + | 612 | Protein_69 | DNA methylase | - |
| QDX04_RS23890 (65946) | 65946..66167 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| QDX04_RS23895 (66181) | 66181..66615 | + | 435 | WP_000274480.1 | DUF1380 family protein | - |
| QDX04_RS23900 (66666) | 66666..67445 | + | 780 | WP_001423681.1 | hypothetical protein | - |
| QDX04_RS23905 (67862) | 67862..68287 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| QDX04_RS23910 (68334) | 68334..68753 | + | 420 | WP_000271717.1 | DUF1380 family protein | - |
| QDX04_RS23915 (68753) | 68753..68944 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QDX04_RS23920 (69931) | 69931..70161 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QDX04_RS23925 (70213) | 70213..71574 | + | 1362 | WP_000170653.1 | DUF3560 domain-containing protein | - |
| QDX04_RS23930 (71621) | 71621..72184 | + | 564 | WP_001423687.1 | class I SAM-dependent methyltransferase | - |
| QDX04_RS23935 (72270) | 72270..72696 | - | 427 | Protein_79 | hypothetical protein | - |
| QDX04_RS23940 (72766) | 72766..72972 | + | 207 | WP_000275848.1 | hypothetical protein | - |
| QDX04_RS23945 (72998) | 72998..73537 | + | 540 | WP_000290811.1 | single-stranded DNA-binding protein | - |
| QDX04_RS23950 (73599) | 73599..73832 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| QDX04_RS23955 (73896) | 73896..75854 | + | 1959 | WP_000117204.1 | ParB/RepB/Spo0J family partition protein | - |
| QDX04_RS23960 (75909) | 75909..76343 | + | 435 | WP_000845912.1 | conjugation system SOS inhibitor PsiB | - |
| QDX04_RS23965 (76340) | 76340..77102 | + | 763 | Protein_85 | plasmid SOS inhibition protein A | - |
| - (77071) | 77071..77269 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (77071) | 77071..77269 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (77071) | 77071..77269 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (77071) | 77071..77269 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| QDX04_RS23970 (77276) | 77276..77425 | + | 150 | Protein_86 | DUF5431 family protein | - |
| QDX04_RS23975 (77367) | 77367..77492 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QDX04_RS23980 (77793) | 77793..77979 | - | 187 | Protein_88 | pilus protein | - |
| QDX04_RS23985 (78039) | 78039..78326 | + | 288 | WP_000107541.1 | hypothetical protein | - |
| QDX04_RS23990 (78444) | 78444..79265 | + | 822 | WP_001424949.1 | DUF932 domain-containing protein | - |
| QDX04_RS23995 (79561) | 79561..80163 | - | 603 | WP_077632063.1 | hypothetical protein | VF |
| QDX04_RS24000 (80485) | 80485..80868 | + | 384 | WP_001151534.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDX04_RS24005 (81059) | 81059..81706 | + | 648 | WP_000332521.1 | conjugal transfer transcriptional regulator TraJ | - |
| QDX04_RS24010 (81842) | 81842..82057 | + | 216 | WP_071782156.1 | conjugal transfer relaxosome protein TraY | - |
| QDX04_RS24015 (82101) | 82101..82466 | + | 366 | WP_000338819.1 | type IV conjugative transfer system pilin TraA | - |
| QDX04_RS24020 (82481) | 82481..82792 | + | 312 | WP_000012125.1 | type IV conjugative transfer system protein TraL | - |
| QDX04_RS24025 (82814) | 82814..83380 | + | 567 | WP_064986971.1 | type IV conjugative transfer system protein TraE | - |
| QDX04_RS24030 (83367) | 83367..84095 | + | 729 | WP_001230776.1 | type-F conjugative transfer system secretin TraK | - |
| QDX04_RS24035 (84095) | 84095..85543 | + | 1449 | WP_000146643.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDX04_RS24040 (85533) | 85533..86117 | + | 585 | WP_001423675.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDX04_RS24045 (86104) | 86104..86301 | + | 198 | WP_001423674.1 | conjugal transfer protein TrbD | - |
| QDX04_RS24050 (86313) | 86313..86564 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| QDX04_RS24055 (86561) | 86561..87076 | + | 516 | WP_000809905.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDX04_RS24060 (87211) | 87211..87432 | + | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| QDX04_RS24065 (87592) | 87592..90219 | + | 2628 | WP_001064261.1 | type IV secretion system protein TraC | - |
| QDX04_RS24070 (90216) | 90216..90602 | + | 387 | WP_000214057.1 | type-F conjugative transfer system protein TrbI | - |
| QDX04_RS24075 (90599) | 90599..91231 | + | 633 | WP_001203748.1 | type-F conjugative transfer system protein TraW | - |
| QDX04_RS24080 (91228) | 91228..92220 | + | 993 | WP_282843543.1 | conjugal transfer pilus assembly protein TraU | - |
| QDX04_RS24085 (92246) | 92246..92709 | + | 464 | Protein_109 | ATP-binding protein | - |
| QDX04_RS24090 (92720) | 92720..93034 | + | 315 | WP_001423717.1 | hypothetical protein | - |
| QDX04_RS24095 (93027) | 93027..93479 | + | 453 | WP_001385157.1 | hypothetical protein | - |
| QDX04_RS24100 (93507) | 93507..94145 | + | 639 | WP_001104087.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDX04_RS24105 (94142) | 94142..95950 | + | 1809 | WP_000821839.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDX04_RS24110 (95977) | 95977..96234 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| QDX04_RS24115 (96227) | 96227..96970 | + | 744 | WP_122997299.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDX04_RS24120 (96986) | 96986..97333 | + | 348 | WP_001287903.1 | conjugal transfer protein TrbA | - |
| QDX04_RS24125 (97452) | 97452..97736 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDX04_RS24130 (97723) | 97723..98277 | + | 555 | WP_000052621.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDX04_RS24135 (98267) | 98267..98581 | + | 315 | WP_001385158.1 | P-type conjugative transfer protein TrbJ | - |
| QDX04_RS24140 (98535) | 98535..98927 | + | 393 | WP_000126336.1 | F-type conjugal transfer protein TrbF | - |
| QDX04_RS24145 (98914) | 98914..100287 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| QDX04_RS24150 (100284) | 100284..103103 | + | 2820 | WP_001007033.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDX04_RS24155 (103106) | 103106..103417 | - | 312 | WP_000522221.1 | heavy metal-binding domain-containing protein | - |
| QDX04_RS24160 (103632) | 103632..104324 | + | 693 | WP_282842692.1 | hypothetical protein | - |
| QDX04_RS24165 (104645) | 104645..106852 | + | 2208 | WP_001385161.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDX04_RS24170 (106852) | 106852..112122 | + | 5271 | WP_282843544.1 | Multifunctional conjugation protein TraI | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|