MGE detailed information
MGE type: Conjugative plasmid MGE length: 91480 bp
Accession: NZ_CP122817 Location: 1..91480 Organism: Escherichia coli strain ETEC1731 Replicon: plasmid unnamed1
Accession: NZ_CP122817 Location: 1..91480 Organism: Escherichia coli strain ETEC1731 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY29_RS24260 (1) | 1..2820 | + | 2820 | WP_001007033.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDY29_RS24265 (2823) | 2823..3134 | - | 312 | WP_000522221.1 | heavy metal-binding domain-containing protein | - |
| QDY29_RS24270 (3349) | 3349..4041 | + | 693 | WP_282842692.1 | hypothetical protein | - |
| QDY29_RS24275 (4362) | 4362..6569 | + | 2208 | WP_001385161.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDY29_RS24280 (6569) | 6569..11839 | + | 5271 | WP_000986925.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDY29_RS24285 (11859) | 11859..12602 | + | 744 | WP_000205703.1 | conjugal transfer pilus acetylase TraX | - |
| QDY29_RS24290 (12657) | 12657..13217 | + | 561 | WP_000139309.1 | fertility inhibition protein FinO | - |
| QDY29_RS24295 (13353) | 13353..13568 | + | 216 | WP_032166857.1 | hypothetical protein | - |
| QDY29_RS24300 (13812) | 13812..13898 | + | 87 | Protein_9 | endonuclease | - |
| QDY29_RS24305 (14079) | 14079..14390 | - | 312 | WP_000765906.1 | hypothetical protein | - |
| - (14686) | 14686..14747 | - | 62 | NuclAT_1 | - | - |
| - (14686) | 14686..14747 | - | 62 | NuclAT_1 | - | - |
| - (14686) | 14686..14747 | - | 62 | NuclAT_1 | - | - |
| - (14686) | 14686..14747 | - | 62 | NuclAT_1 | - | - |
| QDY29_RS24315 (16052) | 16052..16192 | + | 141 | WP_064717426.1 | Hok/Gef family protein | - |
| QDY29_RS24320 (16472) | 16472..16729 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| QDY29_RS24325 (16963) | 16963..17037 | + | 75 | WP_032319616.1 | RepA leader peptide Tap | - |
| QDY29_RS24330 (17030) | 17030..18052 | + | 1023 | WP_000840938.1 | plasmid replication initiator RepA | - |
| QDY29_RS24335 (18968) | 18968..19237 | + | 270 | WP_000079930.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDY29_RS24340 (19237) | 19237..19515 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDY29_RS24345 (19561) | 19561..20290 | + | 730 | Protein_18 | 3'-5' exonuclease | - |
| QDY29_RS24350 (20297) | 20297..20605 | - | 309 | Protein_19 | integrase core domain-containing protein | - |
| QDY29_RS24355 (20622) | 20622..21698 | - | 1077 | WP_000907656.1 | IS110 family transposase ISEc21 | Transposase |
| QDY29_RS24360 (21980) | 21980..22839 | - | 860 | Protein_21 | IS3 family transposase | - |
| QDY29_RS24365 (22953) | 22953..23348 | - | 396 | Protein_22 | ATP-binding protein | - |
| QDY29_RS24370 (23696) | 23696..24070 | - | 375 | WP_015675362.1 | Heat-labile enterotoxin B chain | VF |
| QDY29_RS24375 (24067) | 24067..24843 | - | 777 | WP_042634421.1 | Heat-labile enterotoxin A chain | VF |
| QDY29_RS24380 (25117) | 25117..25321 | - | 205 | Protein_25 | IS110 family transposase | - |
| QDY29_RS24385 (25710) | 25710..26423 | + | 714 | WP_001424997.1 | hypothetical protein | - |
| QDY29_RS24390 (26635) | 26635..27606 | + | 972 | WP_001078349.1 | IS481 family transposase ISEc18 | Transposase |
| QDY29_RS24395 (27698) | 27698..28341 | - | 644 | Protein_28 | DDE-type integrase/transposase/recombinase | - |
| QDY29_RS24400 (28367) | 28367..28946 | + | 580 | Protein_29 | IS256 family transposase | - |
| QDY29_RS24405 (29423) | 29423..29637 | + | 215 | Protein_30 | heat-stable enterotoxin ST-II | - |
| QDY29_RS24410 (30025) | 30025..30868 | + | 844 | Protein_31 | IS3 family transposase | - |
| QDY29_RS24415 (30954) | 30954..31379 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDY29_RS24420 (31376) | 31376..31726 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDY29_RS24425 (31757) | 31757..33370 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QDY29_RS24430 (33397) | 33397..33675 | + | 279 | Protein_35 | transposase | - |
| QDY29_RS24435 (33791) | 33791..35326 | - | 1536 | WP_001424993.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| QDY29_RS24440 (35394) | 35394..35495 | - | 102 | Protein_37 | restriction endonuclease subunit M | - |
| QDY29_RS24445 (35653) | 35653..35805 | - | 153 | Protein_38 | transposase | - |
| QDY29_RS24450 (35881) | 35881..36644 | + | 764 | Protein_39 | IS3 family transposase IS2 | Transposase |
| QDY29_RS24455 (36672) | 36672..37339 | - | 668 | Protein_40 | IS3 family transposase ISKpn38 | Transposase |
| QDY29_RS24460 (37417) | 37417..37590 | - | 174 | Protein_41 | IS3 family transposase | - |
| QDY29_RS24465 (37789) | 37789..38486 | - | 698 | Protein_42 | IS21 family transposase IS100 | Transposase |
| QDY29_RS24470 (38483) | 38483..39492 | - | 1010 | Protein_43 | IS21 family transposase IS100kyp | Transposase |
| QDY29_RS24475 (39545) | 39545..40644 | + | 1100 | Protein_44 | IS3 family transposase IS3F | Transposase |
| QDY29_RS24480 (40991) | 40991..41314 | - | 324 | WP_230909587.1 | Transcriptional repressor MprA | VF |
| QDY29_RS24485 (41363) | 41363..41491 | - | 129 | Protein_46 | Transcriptional repressor MprA | VF |
| QDY29_RS24490 (41963) | 41963..42205 | - | 243 | WP_050562259.1 | toxin-activating lysine-acyltransferase | - |
| QDY29_RS24495 (42656) | 42656..42765 | + | 110 | Protein_48 | IS5/IS1182 family transposase | - |
| QDY29_RS24500 (43288) | 43288..43538 | + | 251 | Protein_49 | type II toxin-antitoxin system ParD family antitoxin | - |
| QDY29_RS24505 (43525) | 43525..43819 | + | 295 | Protein_50 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDY29_RS24510 (44182) | 44182..44922 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QDY29_RS24515 (45207) | 45207..46184 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QDY29_RS24520 (46864) | 46864..47109 | - | 246 | Protein_53 | integrase core domain-containing protein | - |
| QDY29_RS24525 (47111) | 47111..47398 | - | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDY29_RS24530 (47395) | 47395..47646 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QDY29_RS24535 (47819) | 47819..48031 | - | 213 | WP_000402944.1 | hypothetical protein | - |
| QDY29_RS24540 (48405) | 48405..49610 | + | 1206 | WP_000817634.1 | Plasmid partition protein A | VF |
| QDY29_RS24545 (49607) | 49607..50569 | + | 963 | WP_000756327.1 | ParB family protein | - |
| QDY29_RS24550 (50803) | 50803..51580 | + | 778 | Protein_59 | transposase DNA-binding-containing protein | - |
| QDY29_RS24555 (51710) | 51710..51793 | - | 84 | Protein_60 | DUF4113 domain-containing protein | - |
| QDY29_RS24560 (51795) | 51795..52323 | + | 529 | Protein_61 | DUF1281 domain-containing protein | - |
| QDY29_RS24565 (52320) | 52320..52631 | + | 312 | WP_001309256.1 | hypothetical protein | - |
| QDY29_RS24570 (52708) | 52708..52779 | + | 72 | Protein_63 | hypothetical protein | - |
| QDY29_RS24575 (52861) | 52861..54560 | - | 1700 | Protein_64 | group II intron reverse transcriptase/maturase | - |
| QDY29_RS24580 (55182) | 55182..55793 | + | 612 | Protein_65 | DNA methylase | - |
| QDY29_RS24585 (55794) | 55794..56015 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| QDY29_RS24590 (56029) | 56029..56463 | + | 435 | WP_000274480.1 | DUF1380 family protein | - |
| QDY29_RS24595 (56514) | 56514..57293 | + | 780 | WP_001423681.1 | hypothetical protein | - |
| QDY29_RS24600 (57486) | 57486..58597 | - | 1112 | Protein_69 | IS4 family transposase IS186B | Transposase |
| QDY29_RS24605 (59058) | 59058..59483 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| QDY29_RS24610 (59530) | 59530..59949 | + | 420 | WP_000271716.1 | DUF1380 family protein | - |
| QDY29_RS24615 (59949) | 59949..60140 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QDY29_RS24620 (61127) | 61127..61357 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QDY29_RS24625 (61409) | 61409..62770 | + | 1362 | WP_000170653.1 | DUF3560 domain-containing protein | - |
| QDY29_RS24630 (62817) | 62817..63380 | + | 564 | WP_001423687.1 | class I SAM-dependent methyltransferase | - |
| QDY29_RS24635 (63466) | 63466..63892 | - | 427 | Protein_76 | hypothetical protein | - |
| QDY29_RS24640 (63962) | 63962..64168 | + | 207 | WP_000275848.1 | hypothetical protein | - |
| QDY29_RS24645 (64194) | 64194..64733 | + | 540 | WP_000290811.1 | single-stranded DNA-binding protein | - |
| QDY29_RS24650 (64795) | 64795..65028 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| QDY29_RS24655 (65092) | 65092..67050 | + | 1959 | WP_000117204.1 | ParB/RepB/Spo0J family partition protein | - |
| QDY29_RS24660 (67105) | 67105..67539 | + | 435 | WP_000845912.1 | conjugation system SOS inhibitor PsiB | - |
| QDY29_RS24665 (67536) | 67536..68298 | + | 763 | Protein_82 | plasmid SOS inhibition protein A | - |
| - (68267) | 68267..68465 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (68267) | 68267..68465 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (68267) | 68267..68465 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (68267) | 68267..68465 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| QDY29_RS24670 (68472) | 68472..68621 | + | 150 | Protein_83 | DUF5431 family protein | - |
| QDY29_RS24675 (68563) | 68563..68688 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QDY29_RS24680 (68989) | 68989..69175 | - | 187 | Protein_85 | pilus protein | - |
| QDY29_RS24685 (69235) | 69235..69522 | + | 288 | WP_000107541.1 | hypothetical protein | - |
| QDY29_RS24690 (69640) | 69640..70461 | + | 822 | WP_001424949.1 | DUF932 domain-containing protein | - |
| QDY29_RS24695 (70757) | 70757..71359 | - | 603 | WP_077632063.1 | hypothetical protein | VF |
| QDY29_RS24700 (71682) | 71682..72065 | + | 384 | WP_001151534.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDY29_RS24705 (72256) | 72256..72903 | + | 648 | WP_000332521.1 | conjugal transfer transcriptional regulator TraJ | - |
| QDY29_RS24710 (73039) | 73039..73254 | + | 216 | WP_071782156.1 | conjugal transfer relaxosome protein TraY | - |
| QDY29_RS24715 (73298) | 73298..73663 | + | 366 | WP_000338819.1 | type IV conjugative transfer system pilin TraA | - |
| QDY29_RS24720 (73678) | 73678..73989 | + | 312 | WP_000012125.1 | type IV conjugative transfer system protein TraL | - |
| QDY29_RS24725 (74011) | 74011..74577 | + | 567 | WP_064986971.1 | type IV conjugative transfer system protein TraE | - |
| QDY29_RS24730 (74564) | 74564..75292 | + | 729 | WP_001230776.1 | type-F conjugative transfer system secretin TraK | - |
| QDY29_RS24735 (75292) | 75292..76740 | + | 1449 | WP_000146643.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDY29_RS24740 (76730) | 76730..77314 | + | 585 | WP_001423675.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDY29_RS24745 (77301) | 77301..77498 | + | 198 | WP_001423674.1 | conjugal transfer protein TrbD | - |
| QDY29_RS24750 (77510) | 77510..77761 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| QDY29_RS24755 (77758) | 77758..78273 | + | 516 | WP_000809905.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDY29_RS24760 (78408) | 78408..78629 | + | 222 | WP_172693030.1 | conjugal transfer protein TraR | - |
| QDY29_RS24765 (78789) | 78789..81416 | + | 2628 | WP_001064261.1 | type IV secretion system protein TraC | - |
| QDY29_RS24770 (81413) | 81413..81799 | + | 387 | WP_000214057.1 | type-F conjugative transfer system protein TrbI | - |
| QDY29_RS24775 (81796) | 81796..82428 | + | 633 | WP_001203748.1 | type-F conjugative transfer system protein TraW | - |
| QDY29_RS24780 (82425) | 82425..83417 | + | 993 | WP_000830834.1 | conjugal transfer pilus assembly protein TraU | - |
| QDY29_RS24785 (83443) | 83443..83906 | + | 464 | Protein_106 | ATP-binding protein | - |
| QDY29_RS24790 (83917) | 83917..84231 | + | 315 | WP_001423717.1 | hypothetical protein | - |
| QDY29_RS24795 (84224) | 84224..84676 | + | 453 | WP_001385157.1 | hypothetical protein | - |
| QDY29_RS24800 (84704) | 84704..85342 | + | 639 | WP_001104087.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDY29_RS24805 (85339) | 85339..87147 | + | 1809 | WP_000821839.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDY29_RS24810 (87174) | 87174..87431 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| QDY29_RS24815 (87424) | 87424..88167 | + | 744 | WP_001030375.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDY29_RS24820 (88183) | 88183..88530 | + | 348 | WP_001287903.1 | conjugal transfer protein TrbA | - |
| QDY29_RS24825 (88649) | 88649..88933 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDY29_RS24830 (88920) | 88920..89474 | + | 555 | WP_000052621.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDY29_RS24835 (89464) | 89464..89778 | + | 315 | WP_001385158.1 | P-type conjugative transfer protein TrbJ | - |
| QDY29_RS24840 (89732) | 89732..90124 | + | 393 | WP_000126336.1 | F-type conjugal transfer protein TrbF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|