MGE detailed information
MGE type: Conjugative plasmid MGE length: 120805 bp
Accession: NZ_CP122592 Location: 1..120805 Organism: Escherichia coli strain ETEC6335 Replicon: plasmid unnamed4
Accession: NZ_CP122592 Location: 1..120805 Organism: Escherichia coli strain ETEC6335 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY30_RS25720 (1) | 1..912 | + | 912 | WP_024244186.1 | hypothetical protein | VF |
| QDY30_RS25725 (1054) | 1054..1448 | - | 395 | Protein_1 | plasmid partitioning/stability family protein | - |
| QDY30_RS25730 (1448) | 1448..2407 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| QDY30_RS25735 (2846) | 2846..3748 | + | 903 | WP_001393259.1 | DUF1281 domain-containing protein | - |
| QDY30_RS25740 (3745) | 3745..4055 | + | 311 | Protein_4 | hypothetical protein | - |
| QDY30_RS25745 (4131) | 4131..4814 | + | 684 | WP_042634423.1 | DNA methylase | - |
| QDY30_RS25750 (4815) | 4815..5036 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| QDY30_RS25755 (4966) | 4966..5482 | + | 517 | Protein_7 | DUF1380 family protein | - |
| QDY30_RS25760 (5533) | 5533..6309 | + | 777 | WP_045909438.1 | hypothetical protein | - |
| QDY30_RS25765 (6723) | 6723..7148 | + | 426 | WP_042634408.1 | antirestriction protein | - |
| QDY30_RS25770 (7195) | 7195..7617 | + | 423 | WP_042634409.1 | DUF1380 family protein | - |
| QDY30_RS25775 (7614) | 7614..7805 | + | 192 | WP_001027504.1 | hypothetical protein | - |
| QDY30_RS25780 (8165) | 8165..8319 | - | 155 | Protein_12 | hypothetical protein | - |
| QDY30_RS25785 (8836) | 8836..9066 | + | 231 | WP_000218647.1 | hypothetical protein | - |
| QDY30_RS25790 (9118) | 9118..10479 | + | 1362 | WP_000170715.1 | DUF3560 domain-containing protein | - |
| QDY30_RS25795 (10526) | 10526..11089 | + | 564 | WP_042634411.1 | class I SAM-dependent methyltransferase | - |
| QDY30_RS25800 (11683) | 11683..11889 | + | 207 | WP_000547945.1 | hypothetical protein | - |
| QDY30_RS25805 (11915) | 11915..12445 | + | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| QDY30_RS25810 (12501) | 12501..12734 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| QDY30_RS25815 (12798) | 12798..14756 | + | 1959 | WP_282835507.1 | ParB/RepB/Spo0J family partition protein | - |
| QDY30_RS25820 (14811) | 14811..15245 | + | 435 | WP_053897480.1 | conjugation system SOS inhibitor PsiB | - |
| QDY30_RS25825 (15242) | 15242..15961 | + | 720 | WP_042634414.1 | plasmid SOS inhibition protein A | - |
| QDY30_RS25830 (15961) | 15961..16479 | + | 519 | WP_001178554.1 | hypothetical protein | - |
| - (16455) | 16455..16603 | + | 149 | NuclAT_0 | - | Antitoxin Detail |
| - (16455) | 16455..16603 | + | 149 | NuclAT_0 | - | Antitoxin Detail |
| - (16455) | 16455..16603 | + | 149 | NuclAT_0 | - | Antitoxin Detail |
| - (16455) | 16455..16603 | + | 149 | NuclAT_0 | - | Antitoxin Detail |
| QDY30_RS25835 (16669) | 16669..16746 | + | 78 | Protein_23 | DUF5431 family protein | - |
| QDY30_RS25840 (16712) | 16712..16813 | + | 102 | WP_151318007.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QDY30_RS25845 (17188) | 17188..17838 | + | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| QDY30_RS25850 (17838) | 17838..18185 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| QDY30_RS25855 (18205) | 18205..19776 | + | 1572 | WP_000381443.1 | IS66 family transposase IS679 | Transposase |
| QDY30_RS25860 (19802) | 19802..20122 | - | 321 | Protein_28 | hypothetical protein | - |
| QDY30_RS25865 (20192) | 20192..20398 | + | 207 | WP_042634482.1 | hypothetical protein | - |
| QDY30_RS25870 (20422) | 20422..20718 | + | 297 | WP_021558926.1 | hypothetical protein | - |
| QDY30_RS25875 (20824) | 20824..21645 | + | 822 | WP_042634481.1 | DUF932 domain-containing protein | - |
| QDY30_RS25880 (21943) | 21943..22512 | - | 570 | Protein_32 | hypothetical protein | VF |
| QDY30_RS25885 (22867) | 22867..23250 | + | 384 | WP_029397922.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDY30_RS25890 (23441) | 23441..24127 | + | 687 | WP_029397923.1 | PAS domain-containing protein | - |
| QDY30_RS25895 (24221) | 24221..24448 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| QDY30_RS25900 (24482) | 24482..24847 | + | 366 | WP_000340274.1 | type IV conjugative transfer system pilin TraA | - |
| QDY30_RS25905 (24861) | 24861..25172 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QDY30_RS25910 (25194) | 25194..25760 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| QDY30_RS25915 (25747) | 25747..26475 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QDY30_RS25920 (26475) | 26475..27902 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDY30_RS25925 (27892) | 27892..28479 | + | 588 | WP_000002771.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDY30_RS25930 (28466) | 28466..28786 | + | 321 | WP_282866950.1 | conjugal transfer protein TrbD | - |
| QDY30_RS25935 (28779) | 28779..29030 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| QDY30_RS25940 (29027) | 29027..29542 | + | 516 | WP_282866952.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDY30_RS25945 (29677) | 29677..29898 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| QDY30_RS25950 (30058) | 30058..32685 | + | 2628 | WP_072652432.1 | type IV secretion system protein TraC | - |
| QDY30_RS25955 (32682) | 32682..33068 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| QDY30_RS25960 (33065) | 33065..33697 | + | 633 | WP_011251377.1 | type-F conjugative transfer system protein TraW | - |
| QDY30_RS25965 (33694) | 33694..34686 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| QDY30_RS25970 (34712) | 34712..35173 | + | 462 | WP_000277842.1 | hypothetical protein | - |
| QDY30_RS25975 (35203) | 35203..35655 | + | 453 | WP_001349502.1 | hypothetical protein | - |
| QDY30_RS25980 (35683) | 35683..36321 | + | 639 | WP_001104087.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDY30_RS25985 (36318) | 36318..38168 | + | 1851 | WP_282866956.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDY30_RS25990 (38195) | 38195..38452 | + | 258 | WP_000864317.1 | conjugal transfer protein TrbE | - |
| QDY30_RS25995 (38445) | 38445..39188 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDY30_RS26000 (39204) | 39204..39551 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| QDY30_RS26005 (39553) | 39553..39867 | - | 315 | WP_247192119.1 | toxin ArtA | - |
| QDY30_RS26010 (39948) | 39948..40232 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDY30_RS26015 (40219) | 40219..40764 | + | 546 | WP_042634328.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDY30_RS26020 (40754) | 40754..41068 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| QDY30_RS26025 (41022) | 41022..41414 | + | 393 | WP_000126337.1 | F-type conjugal transfer protein TrbF | - |
| QDY30_RS26030 (41401) | 41401..42774 | + | 1374 | WP_282866967.1 | conjugal transfer pilus assembly protein TraH | - |
| QDY30_RS26035 (42771) | 42771..45587 | + | 2817 | WP_089622004.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDY30_RS26040 (45620) | 45620..46141 | + | 522 | WP_089516325.1 | conjugal transfer entry exclusion protein TraS | - |
| QDY30_RS26045 (46166) | 46166..46897 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| QDY30_RS26050 (47100) | 47100..47837 | + | 738 | WP_000199911.1 | hypothetical protein | - |
| QDY30_RS26055 (47888) | 47888..50203 | + | 2316 | WP_282866962.1 | Coupling protein TraD | VF |
| QDY30_RS26060 (50203) | 50203..55473 | + | 5271 | WP_167580153.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDY30_RS26065 (55493) | 55493..56239 | + | 747 | WP_282866965.1 | conjugal transfer pilus acetylase TraX | - |
| QDY30_RS26070 (56294) | 56294..56854 | + | 561 | WP_000139348.1 | fertility inhibition protein FinO | - |
| QDY30_RS26075 (56986) | 56986..57198 | + | 213 | WP_001385659.1 | hypothetical protein | - |
| QDY30_RS26080 (57485) | 57485..58162 | + | 678 | WP_000392235.1 | PIN domain-containing protein | - |
| QDY30_RS26085 (58482) | 58482..59072 | + | 591 | WP_012817838.1 | DUF2726 domain-containing protein | - |
| QDY30_RS26090 (59227) | 59227..59691 | + | 465 | WP_000872610.1 | hypothetical protein | - |
| QDY30_RS26095 (59948) | 59948..60097 | + | 150 | WP_001378818.1 | Hok/Gef family protein | - |
| QDY30_RS26100 (60381) | 60381..60629 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| QDY30_RS26105 (60873) | 60873..60947 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| QDY30_RS26110 (60940) | 60940..61797 | + | 858 | WP_012817826.1 | incFII family plasmid replication initiator RepA | - |
| QDY30_RS26115 (62710) | 62710..62994 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDY30_RS26120 (62994) | 62994..63269 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDY30_RS26125 (63552) | 63552..64739 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDY30_RS26130 (64739) | 64739..65104 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| QDY30_RS26135 (65381) | 65381..66568 | - | 1188 | WP_116794643.1 | IS91 family transposase IS91 | Transposase |
| QDY30_RS26140 (66568) | 66568..66933 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDY30_RS26145 (67015) | 67015..68427 | + | 1413 | Protein_85 | DNA topoisomerase | - |
| QDY30_RS26150 (68566) | 68566..68829 | + | 264 | WP_000063165.1 | hypothetical protein | - |
| QDY30_RS26155 (69001) | 69001..69423 | + | 423 | WP_001398192.1 | hypothetical protein | - |
| QDY30_RS26160 (69876) | 69876..69971 | + | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| QDY30_RS26165 (70761) | 70761..71234 | + | 474 | WP_001122138.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QDY30_RS26170 (71657) | 71657..72022 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDY30_RS26175 (72022) | 72022..73209 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDY30_RS26180 (73486) | 73486..73851 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| QDY30_RS26185 (73851) | 73851..75038 | + | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDY30_RS26190 (76031) | 76031..76728 | + | 698 | WP_236281370.1 | IS1 family transposase IS1X2 | Transposase |
| QDY30_RS26195 (76938) | 76938..78166 | + | 1229 | Protein_95 | IS3 family transposase | - |
| QDY30_RS26200 (78649) | 78649..79161 | + | 513 | WP_001372478.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| QDY30_RS26205 (79173) | 79173..82247 | + | 3075 | WP_039022831.1 | Hemolysin, plasmid | VF |
| QDY30_RS26210 (82319) | 82319..84443 | + | 2125 | Protein_98 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| QDY30_RS26215 (84462) | 84462..85898 | + | 1437 | WP_000860467.1 | Hemolysin secretion protein D, plasmid | VF |
| QDY30_RS26220 (85976) | 85976..86317 | + | 342 | Protein_100 | IS3 family transposase | - |
| QDY30_RS26225 (86908) | 86908..87468 | + | 561 | Protein_101 | IS91 family transposase IS91 | Transposase |
| QDY30_RS26230 (87688) | 87688..88194 | + | 507 | WP_000939423.1 | thiol peroxidase | - |
| QDY30_RS26235 (88414) | 88414..88644 | - | 231 | WP_219789736.1 | hypothetical protein | - |
| QDY30_RS26240 (89150) | 89150..89965 | + | 816 | WP_282835497.1 | HTH-type transcriptional activator RhaR | VF |
| QDY30_RS26245 (90434) | 90434..90801 | - | 368 | Protein_105 | IS3 family transposase | - |
| QDY30_RS26250 (90982) | 90982..91884 | - | 903 | WP_282866939.1 | F18 fimbrial adhesin subunit FedF | - |
| QDY30_RS26255 (92182) | 92182..92721 | - | 540 | WP_097330197.1 | F18 fimbrial subunit FedE | - |
| QDY30_RS26260 (92684) | 92684..93376 | - | 693 | WP_001037287.1 | Chaperone protein FaeE | VF |
| QDY30_RS26265 (93369) | 93369..95783 | - | 2415 | WP_000747724.1 | Outer membrane usher protein YraJ | VF |
| QDY30_RS26270 (95876) | 95876..96391 | - | 516 | WP_282866941.1 | hypothetical protein | VF |
| QDY30_RS26275 (97011) | 97011..97590 | - | 580 | Protein_111 | transposase | - |
| QDY30_RS26280 (97621) | 97621..97791 | - | 171 | WP_162779668.1 | hypothetical protein | - |
| QDY30_RS26285 (97807) | 97807..98001 | - | 195 | Protein_113 | carbohydrate transporter | - |
| QDY30_RS26290 (98086) | 98086..98451 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| QDY30_RS26295 (98451) | 98451..99638 | + | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDY30_RS26300 (100424) | 100424..100507 | + | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| QDY30_RS26305 (100662) | 100662..101306 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QDY30_RS26310 (101687) | 101687..102349 | + | 663 | WP_000516400.1 | division plane positioning ATPase MipZ | - |
| QDY30_RS26315 (102447) | 102447..102728 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| QDY30_RS26320 (102753) | 102753..103730 | + | 978 | WP_001269910.1 | hypothetical protein | - |
| QDY30_RS26325 (103727) | 103727..104083 | - | 357 | WP_000456533.1 | DNA distortion polypeptide 3 | - |
| QDY30_RS26330 (104220) | 104220..104666 | - | 447 | WP_000057426.1 | hypothetical protein | - |
| QDY30_RS26335 (104706) | 104706..105542 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| QDY30_RS26340 (106776) | 106776..107027 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| QDY30_RS26345 (107017) | 107017..107298 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDY30_RS26350 (107444) | 107444..107767 | + | 324 | WP_001181907.1 | hypothetical protein | - |
| QDY30_RS26355 (107812) | 107812..108057 | + | 246 | WP_000356545.1 | hypothetical protein | - |
| QDY30_RS26360 (108047) | 108047..108262 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| QDY30_RS26365 (108651) | 108651..109838 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDY30_RS26370 (109838) | 109838..110203 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| QDY30_RS26375 (110480) | 110480..111667 | - | 1188 | WP_116794643.1 | IS91 family transposase IS91 | Transposase |
| QDY30_RS26380 (111630) | 111630..112031 | - | 402 | WP_000124097.1 | hypothetical protein | - |
| QDY30_RS26385 (112307) | 112307..113494 | - | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| QDY30_RS26390 (113494) | 113494..113859 | - | 366 | WP_000124135.1 | hypothetical protein | - |
| QDY30_RS26395 (113894) | 113894..114352 | - | 459 | Protein_135 | transposase | - |
| QDY30_RS26400 (114430) | 114430..114579 | - | 150 | Protein_136 | IS3 family transposase ISKpn37 | Transposase |
| QDY30_RS26405 (115086) | 115086..115304 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| QDY30_RS26415 (116888) | 116888..117280 | - | 393 | Protein_139 | IS21 family transposase IS21 | Transposase |
| QDY30_RS26420 (117280) | 117280..118452 | - | 1173 | WP_282835500.1 | IS21 family transposase IS21 | Transposase |
| QDY30_RS26425 (118719) | 118719..118988 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | - |
| QDY30_RS26430 (118988) | 118988..119266 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | - |
| QDY30_RS26435 (119575) | 119575..120717 | + | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| QDY30_RS26440 (120690) | 120690..120794 | + | 105 | Protein_144 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|