MGE detailed information
MGE type: Conjugative plasmid MGE length: 129863 bp
Accession: NZ_CP122443 Location: 1..129863 Organism: Enterobacter ludwigii strain I9455333cz Replicon: plasmid pI9455333_MCR10
Accession: NZ_CP122443 Location: 1..129863 Organism: Enterobacter ludwigii strain I9455333cz Replicon: plasmid pI9455333_MCR10
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCL67_RS25620 (QCL67_25620) | 1708..1875 | - | 168 | Protein_1 | Tn3 family transposase | - |
| QCL67_RS25625 (QCL67_25625) | 1875..1979 | + | 105 | Protein_2 | SOS response-associated peptidase family protein | - |
| QCL67_RS25630 (QCL67_25630) | 2256..2732 | - | 477 | Protein_3 | IS110 family transposase IS4321R | Transposase |
| QCL67_RS25635 (QCL67_25635) | 2797..3501 | + | 705 | WP_009364894.1 | IS6 family transposase IS26 | Transposase |
| QCL67_RS25640 (QCL67_25640) | 3556..3942 | + | 387 | Protein_5 | IS481 family transposase ISKpn28 | Transposase |
| QCL67_RS25645 (QCL67_25645) | 3998..4288 | + | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| QCL67_RS25650 (QCL67_25650) | 4285..4686 | + | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| QCL67_RS25655 (QCL67_25655) | 4676..5032 | + | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| QCL67_RS25660 (QCL67_25660) | 5287..5601 | + | 315 | WP_000091613.1 | hypothetical protein | - |
| QCL67_RS25665 (QCL67_25665) | 5803..6507 | - | 705 | WP_009364894.1 | IS6 family transposase IS26 | Transposase |
| QCL67_RS25670 (QCL67_25670) | 6498..7157 | + | 660 | WP_023332835.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| QCL67_RS25675 (QCL67_25675) | 7190..8286 | - | 1097 | Protein_12 | IS3 family transposase ISEc27 | Transposase |
| QCL67_RS25680 (QCL67_25680) | 8850..10469 | - | 1620 | WP_023332837.1 | phosphoethanolamine--lipid A transferase MCR-9.1 | VF |
| QCL67_RS25685 (QCL67_25685) | 10836..11831 | - | 996 | WP_023332838.1 | tyrosine-type recombinase/integrase | - |
| QCL67_RS25690 (QCL67_25690) | 12593..13624 | + | 1032 | WP_040113301.1 | IS630 family transposase ISEc33 | Transposase |
| QCL67_RS25695 (QCL67_25695) | 13723..14691 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| QCL67_RS25700 (QCL67_25700) | 15010..16035 | - | 1026 | WP_045340504.1 | IS110 family transposase ISAve1 | Transposase |
| QCL67_RS25705 (QCL67_25705) | 16414..17022 | + | 609 | WP_023332857.1 | hypothetical protein | VF |
| QCL67_RS25710 (QCL67_25710) | 17118..17819 | + | 702 | WP_000820818.1 | putative fimbrial chaperone YadV | VF |
| QCL67_RS25715 (QCL67_25715) | 17831..20317 | + | 2487 | WP_058659872.1 | Outer membrane usher protein HtrE | VF |
| QCL67_RS25720 (QCL67_25720) | 20308..21282 | + | 975 | WP_060615174.1 | Fimbria adhesin protein | VF |
| QCL67_RS25725 (QCL67_25725) | 21297..21947 | + | 651 | WP_059362884.1 | hypothetical protein | VF |
| QCL67_RS25730 (QCL67_25730) | 21982..22404 | - | 423 | Protein_23 | Cyclic di-GMP phosphodiesterase PdeH | VF |
| QCL67_RS25735 (QCL67_25735) | 22694..23716 | - | 1023 | WP_000156884.1 | IS110 family transposase IS5708 | Transposase |
| QCL67_RS25740 (QCL67_25740) | 24003..24371 | - | 369 | WP_032677090.1 | hypothetical protein | - |
| QCL67_RS25745 (QCL67_25745) | 24518..24649 | - | 132 | Protein_26 | IS1 family transposase | - |
| QCL67_RS25750 (QCL67_25750) | 25078..27075 | + | 1998 | WP_008502232.1 | choline BCCT transporter BetT | - |
| QCL67_RS25755 (QCL67_25755) | 27139..28431 | + | 1293 | WP_023304011.1 | DUF2254 domain-containing protein | - |
| QCL67_RS25760 (QCL67_25760) | 28472..29452 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| QCL67_RS25765 (QCL67_25765) | 29629..30597 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| QCL67_RS25770 (QCL67_25770) | 30665..31657 | - | 993 | WP_166791864.1 | hypothetical protein | - |
| QCL67_RS25775 (QCL67_25775) | 31706..31861 | - | 156 | WP_000074143.1 | hypothetical protein | - |
| QCL67_RS25780 (QCL67_25780) | 32052..32378 | - | 327 | Protein_33 | recombinase family protein | - |
| QCL67_RS25785 (QCL67_25785) | 32313..32807 | + | 495 | Protein_34 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| QCL67_RS25790 (QCL67_25790) | 32992..33549 | + | 558 | WP_000108589.1 | OsmC family protein | - |
| QCL67_RS25795 (QCL67_25795) | 33691..34272 | + | 582 | WP_023304048.1 | HTH-type transcriptional repressor NemR | VF |
| QCL67_RS25800 (QCL67_25800) | 34277..34615 | + | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| QCL67_RS25805 (QCL67_25805) | 34645..34974 | - | 330 | WP_008502229.1 | thioredoxin family protein | - |
| QCL67_RS25810 (QCL67_25810) | 35187..36293 | + | 1107 | WP_006687059.1 | alkene reductase | - |
| QCL67_RS25815 (QCL67_25815) | 36359..37060 | + | 702 | WP_008502228.1 | DsbA family oxidoreductase | - |
| QCL67_RS25820 (QCL67_25820) | 37126..37263 | + | 138 | Protein_41 | sugar dehydrogenase | - |
| QCL67_RS25825 (QCL67_25825) | 37297..38265 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| QCL67_RS25830 (QCL67_25830) | 38616..39032 | - | 417 | WP_000754567.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QCL67_RS25835 (QCL67_25835) | 39029..39259 | - | 231 | WP_023293777.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QCL67_RS25840 (QCL67_25840) | 39535..40035 | + | 501 | WP_021312477.1 | HEPN family nuclease | - |
| QCL67_RS25845 (QCL67_25845) | 40048..40824 | + | 777 | WP_021312478.1 | hypothetical protein | - |
| QCL67_RS25850 (QCL67_25850) | 40986..41234 | + | 249 | WP_023332841.1 | hypothetical protein | - |
| QCL67_RS25855 (QCL67_25855) | 41288..42274 | - | 987 | WP_021312480.1 | hypothetical protein | - |
| QCL67_RS25860 (QCL67_25860) | 42837..43055 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QCL67_RS25865 (QCL67_25865) | 43057..43362 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QCL67_RS25870 (QCL67_25870) | 43549..44553 | + | 1005 | WP_001568027.1 | hypothetical protein | - |
| QCL67_RS25875 (QCL67_25875) | 44737..45516 | + | 780 | WP_001568028.1 | site-specific integrase | - |
| QCL67_RS25880 (QCL67_25880) | 45574..45831 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| QCL67_RS25885 (QCL67_25885) | 45960..46073 | - | 114 | WP_014343462.1 | hypothetical protein | - |
| QCL67_RS25890 (QCL67_25890) | 46704..47459 | + | 756 | WP_001568031.1 | replication initiation protein RepE | - |
| QCL67_RS25895 (QCL67_25895) | 47749..48183 | - | 435 | WP_021312407.1 | hypothetical protein | - |
| QCL67_RS25900 (QCL67_25900) | 48598..49803 | + | 1206 | WP_009484138.1 | AAA family ATPase | - |
| QCL67_RS25905 (QCL67_25905) | 49803..50777 | + | 975 | WP_021312406.1 | ParB family protein | - |
| QCL67_RS25910 (QCL67_25910) | 50859..52130 | - | 1272 | WP_023332915.1 | Y-family DNA polymerase | - |
| QCL67_RS25915 (QCL67_25915) | 52130..52561 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QCL67_RS25920 (QCL67_25920) | 52968..54455 | + | 1488 | WP_023332914.1 | hypothetical protein | VF |
| QCL67_RS25925 (QCL67_25925) | 54704..55675 | + | 972 | WP_001568038.1 | plasmid segregation protein ParM | - |
| QCL67_RS25930 (QCL67_25930) | 55678..56349 | + | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| QCL67_RS25935 (QCL67_25935) | 56412..56642 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| QCL67_RS25940 (QCL67_25940) | 56805..57007 | + | 203 | Protein_65 | hypothetical protein | - |
| QCL67_RS25945 (QCL67_25945) | 57079..57780 | + | 702 | WP_023332912.1 | DNA methylase | - |
| QCL67_RS25950 (QCL67_25950) | 57780..58001 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| QCL67_RS25955 (QCL67_25955) | 58011..58430 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| QCL67_RS25960 (QCL67_25960) | 58484..59251 | + | 768 | WP_001568044.1 | hypothetical protein | - |
| QCL67_RS25965 (QCL67_25965) | 59932..60360 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| QCL67_RS25970 (QCL67_25970) | 60403..60909 | + | 507 | WP_023332911.1 | antirestriction protein ArdA | - |
| QCL67_RS25975 (QCL67_25975) | 60952..61143 | + | 192 | WP_023332910.1 | hypothetical protein | - |
| QCL67_RS25980 (QCL67_25980) | 61331..61585 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| QCL67_RS25985 (QCL67_25985) | 61620..61940 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| QCL67_RS25990 (QCL67_25990) | 62620..62847 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| QCL67_RS25995 (QCL67_25995) | 62939..63169 | + | 231 | WP_009310031.1 | hypothetical protein | - |
| QCL67_RS26000 (QCL67_26000) | 63221..64576 | + | 1356 | WP_009310030.1 | DUF3560 domain-containing protein | - |
| QCL67_RS26005 (QCL67_26005) | 64624..65187 | + | 564 | WP_009310029.1 | methyltransferase | - |
| QCL67_RS26010 (QCL67_26010) | 66018..66560 | + | 543 | WP_020804498.1 | single-stranded DNA-binding protein | - |
| QCL67_RS26015 (QCL67_26015) | 66609..66857 | + | 249 | WP_009310026.1 | DUF905 domain-containing protein | - |
| QCL67_RS26020 (QCL67_26020) | 66927..68984 | + | 2058 | WP_009310025.1 | ParB/RepB/Spo0J family partition protein | - |
| QCL67_RS26025 (QCL67_26025) | 69029..69460 | + | 432 | WP_020804497.1 | conjugation system SOS inhibitor PsiB | - |
| QCL67_RS26030 (QCL67_26030) | 69457..70185 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| QCL67_RS26035 (QCL67_26035) | 70182..70508 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| QCL67_RS26040 (QCL67_26040) | 70564..70938 | + | 375 | WP_023280872.1 | hypothetical protein | - |
| QCL67_RS26045 (QCL67_26045) | 71139..72514 | + | 1376 | WP_086937184.1 | IS3 family transposase ISKpn8 | Transposase |
| QCL67_RS26050 (QCL67_26050) | 72684..73724 | + | 1041 | WP_009310020.1 | ATP-binding protein | - |
| QCL67_RS26055 (QCL67_26055) | 73702..76212 | + | 2511 | WP_071844676.1 | S8 family peptidase | - |
| QCL67_RS26060 (QCL67_26060) | 76665..78005 | + | 1341 | WP_000589001.1 | ISNCY family transposase ISCARN112 | Transposase |
| QCL67_RS26065 (QCL67_26065) | 78261..78683 | - | 423 | WP_032072095.1 | nickel resistance OB fold protein NcrY | - |
| QCL67_RS26070 (QCL67_26070) | 78845..79975 | - | 1131 | WP_004196366.1 | Ni(II)/Co(II) efflux transporter permease subunit NcrC | - |
| QCL67_RS26075 (QCL67_26075) | 79988..80257 | - | 270 | WP_004196355.1 | nickel-sensing transcriptional repressor NcrB | - |
| QCL67_RS26080 (QCL67_26080) | 80363..81661 | - | 1299 | WP_004196314.1 | MFS transporter | - |
| QCL67_RS26085 (QCL67_26085) | 81895..82653 | - | 759 | WP_004196325.1 | hypothetical protein | - |
| QCL67_RS26090 (QCL67_26090) | 82707..83627 | - | 921 | WP_004196315.1 | hypothetical protein | - |
| QCL67_RS26095 (QCL67_26095) | 83690..84061 | - | 372 | WP_004196359.1 | hypothetical protein | - |
| QCL67_RS26100 (QCL67_26100) | 84186..84378 | - | 193 | Protein_97 | MFS transporter | - |
| QCL67_RS26105 (QCL67_26105) | 84408..85385 | + | 978 | WP_004196334.1 | chromate resistance protein | - |
| QCL67_RS26110 (QCL67_26110) | 85342..86718 | + | 1377 | Protein_99 | chromate efflux transporter | - |
| QCL67_RS26115 (QCL67_26115) | 86749..87438 | - | 690 | WP_004196322.1 | hypothetical protein | - |
| QCL67_RS26120 (QCL67_26120) | 87452..88189 | - | 738 | WP_008460272.1 | HupE/UreJ family protein | - |
| QCL67_RS26125 (QCL67_26125) | 88233..88598 | - | 366 | WP_009651956.1 | hypothetical protein | - |
| QCL67_RS26130 (QCL67_26130) | 88726..88824 | - | 99 | Protein_103 | protein YdfV | - |
| QCL67_RS26135 (QCL67_26135) | 88849..89088 | + | 240 | WP_004196370.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QCL67_RS26140 (QCL67_26140) | 89088..89375 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QCL67_RS26145 (QCL67_26145) | 89426..90460 | - | 1035 | Protein_106 | IS481 family transposase ISKpn28 | Transposase |
| QCL67_RS26150 (QCL67_26150) | 90532..90693 | + | 162 | WP_023332863.1 | type I toxin-antitoxin system Hok family toxin | - |
| QCL67_RS26155 (QCL67_26155) | 90788..91996 | + | 1209 | WP_015386429.1 | IS256 family transposase ISEic2 | Transposase |
| QCL67_RS26160 (QCL67_26160) | 92278..92409 | - | 132 | WP_255344245.1 | hypothetical protein | - |
| QCL67_RS26165 (QCL67_26165) | 92576..92711 | + | 136 | Protein_110 | single-stranded DNA-binding protein | - |
| QCL67_RS26170 (QCL67_26170) | 92807..93628 | + | 822 | WP_023332864.1 | DUF932 domain-containing protein | - |
| QCL67_RS26175 (QCL67_26175) | 93694..94002 | + | 309 | WP_023332865.1 | DUF5983 family protein | - |
| QCL67_RS26180 (QCL67_26180) | 94035..94520 | - | 486 | WP_032629900.1 | hypothetical protein | VF |
| QCL67_RS26185 (QCL67_26185) | 94943..95329 | + | 387 | WP_001568107.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QCL67_RS26190 (QCL67_26190) | 95549..96238 | + | 690 | WP_001568106.1 | hypothetical protein | - |
| QCL67_RS26195 (QCL67_26195) | 96413..96577 | + | 165 | WP_071594636.1 | TraY domain-containing protein | - |
| QCL67_RS26200 (QCL67_26200) | 96656..97024 | + | 369 | WP_001568105.1 | type IV conjugative transfer system pilin TraA | - |
| QCL67_RS26205 (QCL67_26205) | 97104..97472 | + | 369 | WP_001568104.1 | type IV conjugative transfer system pilin TraA | - |
| QCL67_RS26210 (QCL67_26210) | 97486..97791 | + | 306 | WP_024191986.1 | type IV conjugative transfer system protein TraL | - |
| QCL67_RS26215 (QCL67_26215) | 97810..98376 | + | 567 | WP_001568102.1 | type IV conjugative transfer system protein TraE | - |
| QCL67_RS26220 (QCL67_26220) | 98363..99103 | + | 741 | WP_001568101.1 | type-F conjugative transfer system secretin TraK | - |
| QCL67_RS26225 (QCL67_26225) | 99103..100515 | + | 1413 | WP_001568100.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QCL67_RS26230 (QCL67_26230) | 100508..100744 | + | 237 | WP_001568098.1 | hypothetical protein | - |
| QCL67_RS26235 (QCL67_26235) | 100763..101332 | + | 570 | WP_001568094.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QCL67_RS26240 (QCL67_26240) | 101446..101859 | + | 414 | WP_001568093.1 | hypothetical protein | - |
| QCL67_RS26245 (QCL67_26245) | 101864..102262 | + | 399 | WP_001568092.1 | hypothetical protein | - |
| QCL67_RS26250 (QCL67_26250) | 102725..105364 | + | 2640 | WP_001568090.1 | type IV secretion system protein TraC | - |
| QCL67_RS26255 (QCL67_26255) | 105364..105741 | + | 378 | WP_001568089.1 | type-F conjugative transfer system protein TrbI | - |
| QCL67_RS26260 (QCL67_26260) | 105738..106367 | + | 630 | WP_023332867.1 | type-F conjugative transfer system protein TraW | - |
| QCL67_RS26265 (QCL67_26265) | 106399..107370 | + | 972 | WP_176602138.1 | conjugal transfer pilus assembly protein TraU | - |
| QCL67_RS26270 (QCL67_26270) | 107383..108009 | + | 627 | WP_001568086.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QCL67_RS26275 (QCL67_26275) | 108006..109898 | + | 1893 | WP_001568085.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QCL67_RS26280 (QCL67_26280) | 109911..110171 | + | 261 | WP_001568084.1 | conjugal transfer protein TrbE | - |
| QCL67_RS26285 (QCL67_26285) | 110168..110500 | + | 333 | WP_001568083.1 | hypothetical protein | - |
| QCL67_RS26290 (QCL67_26290) | 110516..111265 | + | 750 | WP_001568082.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QCL67_RS26295 (QCL67_26295) | 111276..111509 | + | 234 | WP_001568081.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QCL67_RS26300 (QCL67_26300) | 111529..112065 | + | 537 | WP_032160235.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QCL67_RS26305 (QCL67_26305) | 112052..113422 | + | 1371 | WP_023332869.1 | conjugal transfer pilus assembly protein TraH | - |
| QCL67_RS26310 (QCL67_26310) | 113422..116271 | + | 2850 | WP_001568078.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QCL67_RS26315 (QCL67_26315) | 116274..116468 | + | 195 | WP_250128443.1 | hypothetical protein | - |
| QCL67_RS26325 (QCL67_26325) | 117758..118489 | + | 732 | WP_001568076.1 | conjugal transfer complement resistance protein TraT | - |
| QCL67_RS26330 (QCL67_26330) | 118674..120881 | + | 2208 | WP_023332870.1 | type IV conjugative transfer system coupling protein TraD | - |
| QCL67_RS26335 (QCL67_26335) | 120881..126136 | + | 5256 | WP_023332871.1 | Multifunctional conjugation protein TraI | Relaxase |
| QCL67_RS26340 (QCL67_26340) | 126217..126939 | + | 723 | WP_023332872.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| QCL67_RS26345 (QCL67_26345) | 127038..127622 | + | 585 | WP_023332873.1 | fertility inhibition protein FinO | - |
| QCL67_RS26350 (QCL67_26350) | 127741..128529 | + | 789 | WP_023332874.1 | DsbA family protein | - |
| QCL67_RS26355 (QCL67_26355) | 128533..129069 | + | 537 | WP_001568070.1 | Phospholipase D | VF |
| QCL67_RS26360 (QCL67_26360) | 129206..129475 | + | 270 | WP_001568069.1 | replication regulatory protein RepA | - |
| QCL67_RS26365 (QCL67_26365) | 129692..129766 | + | 75 | WP_071594637.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|