MGE detailed information
MGE type: Prophage MGE length: 28934 bp
Accession: NZ_CP122315 Location: 2816191..2845124 Organism: Escherichia coli strain HT-947 Replicon: chromosome
Accession: NZ_CP122315 Location: 2816191..2845124 Organism: Escherichia coli strain HT-947 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCG46_RS13815 (2811697) | 2811697..2813223 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| QCG46_RS13820 (2813260) | 2813260..2814705 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| QCG46_RS13825 (2814705) | 2814705..2816015 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| QCG46_RS13830 (2816191) | 2816191..2817099 | + | 909 | WP_000885458.1 | LysR family transcriptional regulator | - |
| QCG46_RS13835 (2817429) | 2817429..2817992 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| QCG46_RS13840 (2818013) | 2818013..2819245 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| QCG46_RS13845 (2819439) | 2819439..2819486 | + | 48 | WP_211180494.1 | protein YnaN | - |
| QCG46_RS13850 (2819500) | 2819500..2820483 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| QCG46_RS13855 (2820758) | 2820758..2820931 | + | 174 | WP_001296046.1 | protein YnaL | - |
| QCG46_RS13860 (2820961) | 2820961..2822334 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| QCG46_RS13865 (2822463) | 2822463..2823398 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| QCG46_RS13870 (2823450) | 2823450..2824685 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QCG46_RS13875 (2824687) | 2824687..2824902 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2825006) | 2825006..2825184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2825006) | 2825006..2825184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2825006) | 2825006..2825184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2825006) | 2825006..2825184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| QCG46_RS13880 (2824981) | 2824981..2825190 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| QCG46_RS13885 (2825183) | 2825183..2825377 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| QCG46_RS13890 (2825434) | 2825434..2826243 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| QCG46_RS13895 (2826236) | 2826236..2828836 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| QCG46_RS13900 (2828938) | 2828938..2829213 | - | 276 | WP_000632297.1 | protein RacC | - |
| QCG46_RS13905 (2829288) | 2829288..2829458 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| QCG46_RS13910 (2829458) | 2829458..2829679 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| QCG46_RS13915 (2830121) | 2830121..2830609 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| QCG46_RS13920 (2830606) | 2830606..2830761 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| QCG46_RS13925 (2830772) | 2830772..2830906 | - | 135 | WP_000233809.1 | phage protein | - |
| QCG46_RS13930 (2831215) | 2831215..2831691 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| QCG46_RS13935 (2831815) | 2831815..2832111 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| QCG46_RS13940 (2832134) | 2832134..2832556 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| QCG46_RS13945 (2832569) | 2832569..2833426 | + | 858 | WP_000899748.1 | YdaU family protein | - |
| QCG46_RS13950 (2833433) | 2833433..2834179 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| QCG46_RS13955 (2834202) | 2834202..2834654 | + | 453 | Protein_2705 | DUF1627 domain-containing protein | - |
| QCG46_RS13960 (2834850) | 2834850..2835035 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| QCG46_RS13965 (2835232) | 2835232..2836689 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| QCG46_RS13970 (2836827) | 2836827..2837090 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| QCG46_RS13975 (2837071) | 2837071..2837430 | + | 360 | WP_000091628.1 | protein YdaY | - |
| QCG46_RS13980 (2837904) | 2837904..2838836 | + | 933 | Protein_2710 | phage tail length tape measure family protein | - |
| QCG46_RS13985 (2838839) | 2838839..2839054 | + | 216 | Protein_2711 | Ail/Lom family outer membrane beta-barrel protein | - |
| QCG46_RS13990 (2839196) | 2839196..2840176 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| QCG46_RS13995 (2840246) | 2840246..2840434 | + | 189 | Protein_2713 | Ail/Lom family outer membrane beta-barrel protein | - |
| QCG46_RS14000 (2840499) | 2840499..2843861 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QCG46_RS14005 (2843861) | 2843861..2844436 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| QCG46_RS14010 (2844534) | 2844534..2845124 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QCG46_RS14015 (2845441) | 2845441..2845674 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| QCG46_RS14020 (2845743) | 2845743..2845856 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QCG46_RS14025 (2846635) | 2846635..2847069 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| QCG46_RS14030 (2847210) | 2847210..2848343 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0.008 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0.008 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0.008 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0.008 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0.008 |