MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP121262 Location: 3648631..3662604 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 013 Replicon: chromosome
Accession: NZ_CP121262 Location: 3648631..3662604 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 013 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8621_RS17960 () | 3644202..3646646 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| P8621_RS17965 () | 3646755..3647522 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| P8621_RS17970 () | 3647893..3648300 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| P8621_RS17975 () | 3648631..3649350 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| P8621_RS17980 () | 3649354..3649569 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| P8621_RS17985 () | 3649686..3650633 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| P8621_RS17990 () | 3651125..3651365 | - | 241 | Protein_3515 | PerC family transcriptional regulator | - |
| P8621_RS17995 () | 3651448..3652269 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| P8621_RS18000 () | 3652675..3653145 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| P8621_RS18005 () | 3653167..3655677 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| P8621_RS18010 () | 3655701..3656438 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| P8621_RS18015 () | 3656522..3657034 | - | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| P8621_RS18020 () | 3657784..3658488 | - | 705 | Protein_3521 | integrase core domain-containing protein | - |
| P8621_RS18025 () | 3658541..3658789 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| P8621_RS18030 () | 3658891..3659199 | - | 309 | WP_080247984.1 | hypothetical protein | - |
| P8621_RS18035 () | 3659282..3659398 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3659483..3659905 | - | 423 | - | - | Antitoxin Detail |
| P8621_RS18040 () | 3659640..3659915 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| P8621_RS18045 () | 3659968..3660405 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| P8621_RS18050 () | 3660968..3661414 | - | 447 | WP_000935097.1 | protein SciX | - |
| P8621_RS18055 () | 3661408..3662277 | - | 870 | Protein_3528 | hypothetical protein | VF |
| P8621_RS18060 () | 3662341..3662604 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| P8621_RS18065 () | 3662598..3666692 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| P8621_RS18070 () | 3666711..3667157 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |