MGE detailed information
MGE type: Prophage MGE length: 53754 bp
Accession: NZ_CP120622 Location: 2501376..2555129 Organism: Bacillus subtilis strain DSM 1090 Replicon: chromosome
Accession: NZ_CP120622 Location: 2501376..2555129 Organism: Bacillus subtilis strain DSM 1090 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5647_RS12825 (2496399) | 2496399..2497016 | - | 618 | WP_004398514.1 | competence protein ComEA | - |
| P5647_RS12830 (2497100) | 2497100..2497921 | + | 822 | WP_004398597.1 | late competence protein ComER | - |
| P5647_RS12835 (2497987) | 2497987..2498730 | - | 744 | WP_003229973.1 | class I SAM-dependent methyltransferase | - |
| P5647_RS12840 (2498727) | 2498727..2499083 | - | 357 | WP_003229971.1 | ribosome silencing factor | - |
| P5647_RS12845 (2499101) | 2499101..2499661 | - | 561 | WP_004399059.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| P5647_RS12850 (2499651) | 2499651..2500220 | - | 570 | WP_004398676.1 | nicotinate-nucleotide adenylyltransferase | - |
| P5647_RS12855 (2500232) | 2500232..2500522 | - | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| P5647_RS12860 (2500516) | 2500516..2501358 | - | 843 | WP_003229967.1 | shikimate dehydrogenase | - |
| P5647_RS12865 (2501376) | 2501376..2502476 | - | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| P5647_RS12870 (2502480) | 2502480..2502998 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| P5647_RS12875 (2503360) | 2503360..2503500 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| P5647_RS12880 (2503806) | 2503806..2504537 | - | 732 | WP_003229964.1 | GDSL-type esterase/lipase family protein | - |
| P5647_RS12885 (2504789) | 2504789..2505541 | - | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| P5647_RS12890 (2505728) | 2505728..2506354 | + | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| P5647_RS12895 (2506373) | 2506373..2507266 | - | 894 | WP_003229961.1 | 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating | VF |
| P5647_RS12900 (2507518) | 2507518..2508240 | + | 723 | WP_010886572.1 | hypothetical protein | - |
| P5647_RS12905 (2508273) | 2508273..2508683 | - | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | - |
| P5647_RS12910 (2508879) | 2508879..2509226 | + | 348 | Protein_2500 | sigma-70 family RNA polymerase sigma factor | - |
| P5647_RS12915 (2509257) | 2509257..2510717 | - | 1461 | WP_223257626.1 | hypothetical protein ; Integrase | Integrase |
| P5647_RS12920 (2510675) | 2510675..2510853 | - | 179 | Protein_2502 | hypothetical protein | - |
| P5647_RS12925 (2511208) | 2511208..2511627 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| P5647_RS12930 (2511639) | 2511639..2512679 | - | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| P5647_RS12935 (2512702) | 2512702..2513142 | - | 441 | WP_003229954.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| P5647_RS12940 (2513203) | 2513203..2513520 | - | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| P5647_RS12945 (2513892) | 2513892..2514656 | - | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| P5647_RS12950 (2515099) | 2515099..2516226 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| P5647_RS12955 (2516216) | 2516216..2516350 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| P5647_RS12960 (2516460) | 2516460..2516618 | + | 159 | WP_003245945.1 | hypothetical protein | - |
| P5647_RS12965 (2516988) | 2516988..2518583 | + | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| P5647_RS12970 (2518598) | 2518598..2519176 | + | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| P5647_RS12975 (2519294) | 2519294..2519440 | + | 147 | WP_009967791.1 | hypothetical protein | - |
| P5647_RS12980 (2519437) | 2519437..2519799 | - | 363 | WP_003229947.1 | hypothetical protein | - |
| P5647_RS12985 (2519815) | 2519815..2520294 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| P5647_RS12990 (2520459) | 2520459..2521277 | - | 819 | WP_003229946.1 | N-acetylmuramoyl-L-alanine amidase CwlA | VF |
| P5647_RS12995 (2521322) | 2521322..2521744 | - | 423 | WP_003246208.1 | holin family protein | - |
| P5647_RS13000 (2521789) | 2521789..2522682 | - | 894 | WP_003246010.1 | hypothetical protein | - |
| P5647_RS13005 (2522770) | 2522770..2522934 | - | 165 | WP_003229944.1 | XkdX family protein | - |
| P5647_RS13010 (2522931) | 2522931..2523266 | - | 336 | WP_009967793.1 | XkdW family protein | - |
| P5647_RS13015 (2523276) | 2523276..2524376 | - | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| P5647_RS13020 (2524379) | 2524379..2524651 | - | 273 | WP_003229942.1 | hypothetical protein | - |
| P5647_RS13025 (2524648) | 2524648..2525226 | - | 579 | WP_003229941.1 | YmfQ family protein | - |
| P5647_RS13030 (2525210) | 2525210..2526256 | - | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| P5647_RS13035 (2526249) | 2526249..2526674 | - | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| P5647_RS13040 (2526687) | 2526687..2526950 | - | 264 | WP_003229938.1 | DUF2577 family protein | - |
| P5647_RS13045 (2526947) | 2526947..2527927 | - | 981 | WP_004398524.1 | hypothetical protein | - |
| P5647_RS13050 (2527940) | 2527940..2528599 | - | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| P5647_RS13055 (2528592) | 2528592..2533349 | - | 4758 | WP_003246092.1 | transglycosylase SLT domain-containing protein | - |
| P5647_RS13060 (2533352) | 2533352..2533489 | - | 138 | WP_003229934.1 | hypothetical protein | - |
| P5647_RS13065 (2533531) | 2533531..2533980 | - | 450 | WP_003229933.1 | phage portal protein | - |
| P5647_RS13070 (2534126) | 2534126..2534305 | + | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - (2534229) | 2534229..2534451 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2534229) | 2534229..2534451 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2534229) | 2534229..2534451 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2534229) | 2534229..2534451 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| P5647_RS13075 (2534685) | 2534685..2534774 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| P5647_RS13080 (2535028) | 2535028..2535471 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| P5647_RS13085 (2535474) | 2535474..2536874 | - | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| P5647_RS13090 (2536875) | 2536875..2537066 | - | 192 | WP_010886574.1 | hypothetical protein | - |
| P5647_RS13095 (2537063) | 2537063..2537500 | - | 438 | WP_003229927.1 | hypothetical protein | - |
| P5647_RS13100 (2537513) | 2537513..2538016 | - | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| P5647_RS13105 (2538013) | 2538013..2538375 | - | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| P5647_RS13110 (2538372) | 2538372..2538767 | - | 396 | WP_004398566.1 | DUF3199 family protein | - |
| P5647_RS13115 (2538771) | 2538771..2539082 | - | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| P5647_RS13120 (2539093) | 2539093..2540028 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| P5647_RS13125 (2540047) | 2540047..2541015 | - | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| P5647_RS13130 (2541048) | 2541048..2541701 | - | 654 | WP_003229920.1 | hypothetical protein | - |
| P5647_RS13135 (2541742) | 2541742..2542659 | - | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| P5647_RS13140 (2542656) | 2542656..2544188 | - | 1533 | WP_004398894.1 | phage portal protein | - |
| P5647_RS13145 (2544192) | 2544192..2545487 | - | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| P5647_RS13150 (2545480) | 2545480..2546199 | - | 720 | WP_003229916.1 | phage terminase small subunit | - |
| P5647_RS13155 (2546267) | 2546267..2546731 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| P5647_RS13160 (2546875) | 2546875..2547330 | - | 456 | WP_004398775.1 | hypothetical protein | - |
| P5647_RS13165 (2547528) | 2547528..2548457 | + | 930 | WP_003229913.1 | hypothetical protein | - |
| P5647_RS13170 (2548531) | 2548531..2548737 | - | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| P5647_RS13175 (2548819) | 2548819..2549247 | - | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| P5647_RS13180 (2549343) | 2549343..2549492 | - | 150 | WP_003229910.1 | hypothetical protein | - |
| P5647_RS13185 (2549483) | 2549483..2550424 | - | 942 | WP_075058863.1 | ATP-binding protein | - |
| P5647_RS13190 (2550306) | 2550306..2550983 | - | 678 | WP_116362964.1 | DnaD domain protein | - |
| P5647_RS13195 (2551059) | 2551059..2551913 | - | 855 | WP_003229907.1 | recombinase RecT | - |
| P5647_RS13200 (2551916) | 2551916..2552875 | - | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| P5647_RS13205 (2552981) | 2552981..2553175 | - | 195 | WP_003229905.1 | hypothetical protein | - |
| P5647_RS13210 (2553135) | 2553135..2553308 | - | 174 | WP_119123069.1 | hypothetical protein | - |
| P5647_RS13215 (2553305) | 2553305..2553562 | - | 258 | WP_003245994.1 | YqaH family protein | - |
| P5647_RS13220 (2553559) | 2553559..2554128 | - | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| P5647_RS13225 (2554202) | 2554202..2554342 | - | 141 | WP_003229902.1 | hypothetical protein | - |
| P5647_RS13230 (2554372) | 2554372..2554602 | - | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| P5647_RS13235 (2554779) | 2554779..2555129 | + | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| P5647_RS13240 (2555396) | 2555396..2555563 | - | 168 | WP_003229900.1 | hypothetical protein | - |
| P5647_RS13245 (2555919) | 2555919..2556455 | - | 537 | WP_004399117.1 | AAA family ATPase | - |
| P5647_RS13250 (2556724) | 2556724..2557242 | + | 519 | WP_004399097.1 | ImmA/IrrE family metallo-endopeptidase | - |
| P5647_RS13255 (2557248) | 2557248..2557640 | + | 393 | Protein_2569 | sigma-70 family RNA polymerase sigma factor | - |
| P5647_RS13260 (2557640) | 2557640..2557756 | + | 117 | WP_003229898.1 | hypothetical protein | - |
| P5647_RS13265 (2557722) | 2557722..2557922 | - | 201 | Protein_2571 | recombinase family protein | - |
| P5647_RS13270 (2557865) | 2557865..2558029 | - | 165 | WP_010886576.1 | hypothetical protein | - |
| P5647_RS13275 (2558574) | 2558574..2558990 | - | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | Prophage | TA6322, TA10201, TA20260 | NC_000964 | 2645490..2699243 | 0 |