MGE detailed information
MGE type: Conjugative plasmid MGE length: 128330 bp
Accession: NZ_CP120558 Location: 1..128330 Organism: Escherichia coli strain B771 Replicon: plasmid pB771_128330
Accession: NZ_CP120558 Location: 1..128330 Organism: Escherichia coli strain B771 Replicon: plasmid pB771_128330
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5709_RS24905 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| P5709_RS24910 (1263) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| P5709_RS24915 (2124) | 2124..2312 | - | 189 | WP_059328029.1 | hypothetical protein | - |
| P5709_RS24920 (2687) | 2687..3589 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| P5709_RS24925 (3658) | 3658..4767 | - | 1110 | WP_000771476.1 | SDR family oxidoreductase | - |
| P5709_RS24930 (5200) | 5200..6153 | - | 954 | WP_000280979.1 | Protease 7 | VF |
| P5709_RS24935 (7406) | 7406..7806 | - | 401 | Protein_6 | integrase core domain-containing protein | - |
| P5709_RS24940 (7816) | 7816..8141 | - | 326 | Protein_7 | IS3 family transposase ISLad1 | Transposase |
| P5709_RS24945 (8240) | 8240..9748 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| P5709_RS24950 (10447) | 10447..10797 | + | 351 | Protein_9 | IS3 family transposase | - |
| P5709_RS24955 (11392) | 11392..12579 | + | 1188 | WP_000928805.1 | efflux RND transporter periplasmic adaptor subunit | - |
| P5709_RS24960 (12576) | 12576..14516 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| P5709_RS24965 (14520) | 14520..15890 | + | 1371 | WP_001318212.1 | efflux transporter outer membrane subunit | - |
| P5709_RS24975 (17109) | 17109..17848 | + | 740 | Protein_14 | IS3 family transposase IS1203 | Transposase |
| P5709_RS24980 (18521) | 18521..20029 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| P5709_RS24985 (20119) | 20119..20592 | + | 474 | Protein_16 | IS3 family transposase IS629 | Transposase |
| P5709_RS24990 (20637) | 20637..20780 | + | 144 | Protein_17 | IS30 family transposase | - |
| P5709_RS24995 (20902) | 20902..21267 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| P5709_RS25000 (21267) | 21267..21529 | + | 263 | Protein_19 | IS91 family transposase ISEc37 | Transposase |
| P5709_RS25005 (21734) | 21734..22744 | + | 1011 | WP_000487120.1 | IS110 family transposase IS1663 | Transposase |
| P5709_RS25010 (23322) | 23322..23912 | + | 591 | WP_000086538.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| P5709_RS25015 (23959) | 23959..24117 | + | 159 | Protein_22 | integrase core domain-containing protein | - |
| P5709_RS25020 (24267) | 24267..25265 | + | 999 | WP_000756335.1 | ABC transporter substrate-binding protein | - |
| P5709_RS25025 (25265) | 25265..26302 | + | 1038 | WP_000110581.1 | Hemin transport system permease protein HmuU | VF |
| P5709_RS25030 (26302) | 26302..27063 | + | 762 | WP_000020503.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| P5709_RS25035 (27120) | 27120..28307 | + | 1188 | WP_025999368.1 | MFS transporter | - |
| P5709_RS25040 (28385) | 28385..28642 | - | 258 | WP_000412701.1 | bacteriocin immunity protein | - |
| P5709_RS25045 (28643) | 28643..28876 | - | 234 | WP_000451769.1 | HNH endonuclease signature motif containing protein | - |
| P5709_RS25050 (28972) | 28972..29243 | + | 272 | Protein_29 | hypothetical protein | - |
| P5709_RS25055 (29404) | 29404..29583 | - | 180 | Protein_30 | 3'-5' exonuclease | - |
| P5709_RS25060 (29629) | 29629..29796 | - | 168 | Protein_31 | type II toxin-antitoxin system toxin YacB | - |
| P5709_RS25065 (29793) | 29793..30623 | + | 831 | Protein_32 | IS66 family transposase ISEc43 | Transposase |
| P5709_RS25070 (30667) | 30667..31315 | - | 649 | Protein_33 | IS3 family transposase IS1203 | Transposase |
| P5709_RS25075 (31372) | 31372..31803 | + | 432 | Protein_34 | relaxase NikB | - |
| P5709_RS25080 (31908) | 31908..31992 | + | 85 | Protein_35 | hypothetical protein | - |
| P5709_RS25085 (32262) | 32262..32930 | + | 669 | WP_000155780.1 | cysteine hydrolase | - |
| P5709_RS25090 (32936) | 32936..33796 | + | 861 | WP_001442105.1 | DUF2877 domain-containing protein | - |
| P5709_RS25095 (33891) | 33891..35450 | + | 1560 | WP_277715438.1 | acyl-CoA synthetase FdrA | - |
| P5709_RS25100 (35447) | 35447..36871 | + | 1425 | WP_001093931.1 | DUF1116 domain-containing protein | - |
| P5709_RS25105 (36864) | 36864..37820 | + | 957 | WP_001696801.1 | carbamate kinase | - |
| P5709_RS25110 (37837) | 37837..38226 | + | 390 | WP_001696803.1 | hypothetical protein | - |
| P5709_RS25115 (38249) | 38249..39472 | + | 1224 | WP_024188138.1 | cytosine permease | - |
| P5709_RS25120 (39550) | 39550..40440 | + | 891 | WP_000470711.1 | putative HTH-type transcriptional regulator YahB | VF |
| P5709_RS25125 (40874) | 40874..41263 | + | 390 | WP_000595317.1 | cytochrome b562 | - |
| P5709_RS25130 (41515) | 41515..42503 | + | 989 | Protein_45 | hypothetical protein | VF |
| P5709_RS25135 (42477) | 42477..42974 | + | 498 | WP_032297276.1 | hypothetical protein | VF |
| P5709_RS25140 (43652) | 43652..43942 | - | 291 | WP_000633743.1 | hypothetical protein | - |
| P5709_RS25145 (44000) | 44000..44665 | - | 666 | WP_000536047.1 | ProQ/FINO family protein | - |
| P5709_RS25150 (44768) | 44768..45046 | - | 279 | Protein_49 | serine acetyltransferase | - |
| P5709_RS25160 (46102) | 46102..46943 | + | 842 | Protein_51 | hypothetical protein | - |
| P5709_RS25165 (47418) | 47418..48347 | - | 930 | WP_001084376.1 | putative HTH-type transcriptional regulator YahB | VF |
| P5709_RS25170 (48735) | 48735..49340 | + | 606 | WP_000066154.1 | ankyrin repeat domain-containing protein | - |
| P5709_RS25175 (49426) | 49426..50274 | + | 849 | WP_000531854.1 | DUF2877 domain-containing protein | - |
| P5709_RS25180 (50234) | 50234..51781 | + | 1548 | WP_000027750.1 | acyl-CoA synthetase FdrA | - |
| P5709_RS25185 (51781) | 51781..53199 | + | 1419 | WP_000084168.1 | DUF1116 domain-containing protein | - |
| P5709_RS25190 (53312) | 53312..54862 | + | 1551 | WP_001084509.1 | hypothetical protein | - |
| P5709_RS25195 (54889) | 54889..55851 | + | 963 | WP_000661609.1 | carbamate kinase family protein | - |
| P5709_RS25200 (56687) | 56687..57908 | - | 1222 | Protein_59 | ISL3 family transposase ISEc38 | Transposase |
| P5709_RS25205 (58008) | 58008..58372 | + | 365 | Protein_60 | IS1 family transposase | - |
| P5709_RS25210 (58427) | 58427..59209 | - | 783 | WP_001442137.1 | IS21 family transposase IS100kyp | Transposase |
| P5709_RS25215 (59206) | 59206..60228 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| P5709_RS25220 (60317) | 60317..60664 | + | 348 | Protein_63 | IS1-like element IS1A family transposase | - |
| P5709_RS25225 (60680) | 60680..61000 | - | 321 | Protein_64 | serine acetyltransferase | - |
| P5709_RS25230 (61104) | 61104..61391 | - | 288 | WP_000222760.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P5709_RS25235 (61388) | 61388..61639 | - | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| P5709_RS25240 (62603) | 62603..63460 | - | 858 | WP_029400224.1 | incFII family plasmid replication initiator RepA | - |
| P5709_RS25245 (63453) | 63453..63527 | - | 75 | WP_032144212.1 | RepA leader peptide Tap | - |
| P5709_RS25250 (63773) | 63773..64021 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| P5709_RS25255 (64305) | 64305..64454 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (64498) | 64498..64559 | + | 62 | NuclAT_1 | - | - |
| - (64498) | 64498..64559 | + | 62 | NuclAT_1 | - | - |
| - (64498) | 64498..64559 | + | 62 | NuclAT_1 | - | - |
| - (64498) | 64498..64559 | + | 62 | NuclAT_1 | - | - |
| P5709_RS25260 (64735) | 64735..65237 | - | 503 | Protein_71 | DUF2726 domain-containing protein | - |
| P5709_RS25265 (65276) | 65276..65485 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| P5709_RS25270 (65531) | 65531..65992 | - | 462 | WP_000978818.1 | thermonuclease family protein | - |
| P5709_RS25275 (66238) | 66238..66450 | - | 213 | WP_032303448.1 | hypothetical protein | - |
| P5709_RS25280 (66586) | 66586..67146 | - | 561 | WP_001567328.1 | fertility inhibition protein FinO | - |
| P5709_RS25285 (67200) | 67200..67946 | - | 747 | WP_000205764.1 | conjugal transfer pilus acetylase TraX | - |
| P5709_RS25290 (67966) | 67966..73216 | - | 5251 | Protein_77 | Multifunctional conjugation protein TraI | Relaxase |
| P5709_RS25295 (73216) | 73216..75486 | - | 2271 | WP_172694489.1 | type IV conjugative transfer system coupling protein TraD | - |
| P5709_RS25300 (75739) | 75739..76470 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| P5709_RS25305 (76502) | 76502..77005 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| P5709_RS25310 (77020) | 77020..79842 | - | 2823 | WP_001007026.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| P5709_RS25315 (79839) | 79839..81212 | - | 1374 | WP_065802015.1 | conjugal transfer pilus assembly protein TraH | - |
| P5709_RS25320 (81212) | 81212..81574 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| P5709_RS25325 (81504) | 81504..82049 | - | 546 | WP_000060037.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| P5709_RS25330 (82036) | 82036..82320 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| P5709_RS25335 (82439) | 82439..82786 | - | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| P5709_RS25340 (82802) | 82802..83545 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| P5709_RS25345 (83538) | 83538..83795 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| P5709_RS25350 (83822) | 83822..85630 | - | 1809 | WP_001567342.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| P5709_RS25355 (85627) | 85627..86265 | - | 639 | WP_029400171.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| P5709_RS25360 (86274) | 86274..87266 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| P5709_RS25365 (87263) | 87263..87895 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| P5709_RS25370 (87892) | 87892..88278 | - | 387 | WP_029400173.1 | type-F conjugative transfer system protein TrbI | - |
| P5709_RS25375 (88275) | 88275..90905 | - | 2631 | WP_000069755.1 | type IV secretion system protein TraC | - |
| P5709_RS25380 (91031) | 91031..91393 | - | 363 | WP_029400175.1 | hypothetical protein | - |
| P5709_RS25385 (91421) | 91421..91639 | - | 219 | WP_000556751.1 | hypothetical protein | - |
| P5709_RS25390 (91719) | 91719..92195 | - | 477 | WP_029400176.1 | hypothetical protein | - |
| P5709_RS25395 (92188) | 92188..92409 | - | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| P5709_RS25400 (92544) | 92544..93059 | - | 516 | WP_000809874.1 | type IV conjugative transfer system lipoprotein TraV | - |
| P5709_RS25405 (93056) | 93056..93376 | - | 321 | WP_001057305.1 | conjugal transfer protein TrbD | - |
| P5709_RS25410 (93363) | 93363..93953 | - | 591 | WP_023352032.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| P5709_RS25415 (93943) | 93943..95370 | - | 1428 | WP_023352033.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| P5709_RS25420 (95370) | 95370..96098 | - | 729 | WP_029400178.1 | type-F conjugative transfer system secretin TraK | - |
| P5709_RS25425 (96085) | 96085..96651 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| P5709_RS25430 (96673) | 96673..96984 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| P5709_RS25435 (96999) | 96999..97358 | - | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| P5709_RS25440 (97391) | 97391..97792 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| P5709_RS25445 (97885) | 97885..98574 | - | 690 | WP_029400181.1 | conjugal transfer transcriptional regulator TraJ | - |
| P5709_RS25450 (98761) | 98761..99144 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| P5709_RS25455 (99465) | 99465..100067 | + | 603 | WP_000243709.1 | hypothetical protein | VF |
| P5709_RS25460 (100364) | 100364..101185 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| P5709_RS25465 (101304) | 101304..101591 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| P5709_RS25470 (101881) | 101881..102045 | - | 165 | WP_001716565.1 | hypothetical protein | - |
| P5709_RS25475 (102138) | 102138..102263 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| P5709_RS25480 (102205) | 102205..102354 | - | 150 | Protein_115 | DUF5431 family protein | - |
| - (102361) | 102361..102555 | - | 195 | NuclAT_0 | - | - |
| - (102361) | 102361..102555 | - | 195 | NuclAT_0 | - | - |
| - (102361) | 102361..102555 | - | 195 | NuclAT_0 | - | - |
| - (102361) | 102361..102555 | - | 195 | NuclAT_0 | - | - |
| P5709_RS25485 (102545) | 102545..103286 | - | 742 | Protein_116 | plasmid SOS inhibition protein A | - |
| P5709_RS25490 (103283) | 103283..103717 | - | 435 | WP_029400524.1 | conjugation system SOS inhibitor PsiB | - |
| P5709_RS25495 (103772) | 103772..105736 | - | 1965 | WP_001587501.1 | ParB/RepB/Spo0J family partition protein | - |
| P5709_RS25500 (105802) | 105802..106035 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| P5709_RS25505 (106093) | 106093..106620 | - | 528 | WP_000290825.1 | single-stranded DNA-binding protein | - |
| P5709_RS25510 (106646) | 106646..106852 | - | 207 | WP_029400906.1 | hypothetical protein | - |
| P5709_RS25515 (106922) | 106922..107429 | + | 508 | Protein_122 | hypothetical protein | - |
| P5709_RS25520 (107408) | 107408..107599 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| P5709_RS25525 (107596) | 107596..108018 | - | 423 | WP_001619601.1 | DUF1380 family protein | - |
| P5709_RS25530 (108065) | 108065..108490 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| P5709_RS25535 (108880) | 108880..109051 | - | 172 | Protein_126 | hypothetical protein | - |
| P5709_RS25540 (109341) | 109341..110312 | - | 972 | WP_001519995.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| P5709_RS25545 (110312) | 110312..111478 | - | 1167 | WP_001519994.1 | hypothetical protein | VF |
| P5709_RS25550 (111941) | 111941..112138 | - | 198 | Protein_129 | CcdB family protein | - |
| P5709_RS25555 (112260) | 112260..113018 | + | 759 | Protein_130 | IS21 family transposase | - |
| P5709_RS25560 (113407) | 113407..113859 | - | 453 | WP_001519992.1 | acyltransferase | - |
| P5709_RS25565 (114012) | 114012..114401 | + | 390 | Protein_132 | hypothetical protein | - |
| P5709_RS25570 (114421) | 114421..114768 | - | 348 | WP_001582578.1 | DUF6404 family protein | - |
| P5709_RS25575 (114897) | 114897..115232 | + | 336 | WP_277715435.1 | colicin E1 family microcin immunity protein | - |
| P5709_RS25580 (115254) | 115254..117134 | - | 1881 | WP_240090025.1 | colicin Ia central receptor-binding domain-containing protein | - |
| P5709_RS25585 (117479) | 117479..117772 | - | 294 | WP_029400272.1 | YqjK-like family protein | - |
| P5709_RS25590 (117769) | 117769..118170 | - | 402 | WP_029400271.1 | phage holin family protein | - |
| P5709_RS25595 (118254) | 118254..118607 | - | 354 | WP_000990989.1 | hypothetical protein | - |
| P5709_RS25600 (118679) | 118679..118927 | - | 249 | WP_000467268.1 | DUF883 family protein | - |
| P5709_RS25605 (119512) | 119512..119829 | - | 318 | WP_000845366.1 | hypothetical protein | VF |
| P5709_RS25610 (120496) | 120496..121488 | - | 993 | WP_059328028.1 | hypothetical protein | - |
| P5709_RS25615 (121516) | 121516..122016 | - | 501 | WP_157917912.1 | Minor fimbrial protein PrsF | VF |
| P5709_RS25620 (122057) | 122057..122518 | - | 462 | WP_242791976.1 | hypothetical protein | VF |
| P5709_RS25625 (122609) | 122609..123340 | - | 732 | WP_001171047.1 | Chaperone protein PapD | VF |
| P5709_RS25630 (123409) | 123409..125919 | - | 2511 | WP_277715437.1 | Outer membrane usher protein PapC | VF |
| P5709_RS25635 (126040) | 126040..126627 | - | 588 | WP_001297837.1 | PAP fimbrial minor pilin protein | VF |
| P5709_RS25640 (126714) | 126714..127241 | - | 528 | WP_001045099.1 | Pap fimbrial major pilin protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|