MGE detailed information
MGE type: Conjugative plasmid MGE length: 153456 bp
Accession: NZ_CP120550 Location: 1..153456 Organism: Escherichia coli strain B1172 Replicon: plasmid pB1172_153456
Accession: NZ_CP120550 Location: 1..153456 Organism: Escherichia coli strain B1172 Replicon: plasmid pB1172_153456
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5710_RS24935 (P5710_24935) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| P5710_RS24940 (P5710_24940) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| P5710_RS24945 (P5710_24945) | 2124..2312 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| P5710_RS24950 (P5710_24950) | 2687..3589 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| P5710_RS24955 (P5710_24955) | 3658..4767 | - | 1110 | WP_000771476.1 | SDR family oxidoreductase | - |
| P5710_RS24960 (P5710_24960) | 5200..6153 | - | 954 | WP_000280979.1 | Protease 7 | VF |
| P5710_RS24965 (P5710_24965) | 7405..7805 | - | 401 | Protein_6 | integrase core domain-containing protein | - |
| P5710_RS24970 (P5710_24970) | 7815..8140 | - | 326 | Protein_7 | IS3 family transposase ISLad1 | Transposase |
| P5710_RS24975 (P5710_24975) | 8186..8526 | + | 341 | Protein_8 | IS3 family transposase | - |
| P5710_RS24980 (P5710_24980) | 9121..10308 | + | 1188 | WP_000928805.1 | efflux RND transporter periplasmic adaptor subunit | - |
| P5710_RS24985 (P5710_24985) | 10305..12245 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| P5710_RS24990 (P5710_24990) | 12249..13619 | + | 1371 | WP_001318212.1 | efflux transporter outer membrane subunit | - |
| P5710_RS24995 (P5710_24995) | 13990..15318 | - | 1329 | WP_000547316.1 | IS4 family transposase IS4 | Transposase |
| P5710_RS25005 (P5710_25005) | 16307..16501 | + | 195 | Protein_14 | IS200/IS605-like element IS200C family transposase | - |
| P5710_RS25010 (P5710_25010) | 16630..17571 | - | 942 | WP_096959347.1 | hypothetical protein | - |
| P5710_RS25015 (P5710_25015) | 17806..19195 | - | 1390 | Protein_16 | ISNCY family transposase ISKpn21 | Transposase |
| P5710_RS25020 (P5710_25020) | 19507..19656 | - | 150 | Protein_17 | IS3 family transposase IS2 | Transposase |
| P5710_RS25025 (P5710_25025) | 19834..21027 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| P5710_RS25035 (P5710_25035) | 23417..23710 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| P5710_RS25040 (P5710_25040) | 23768..23967 | - | 200 | Protein_21 | lysis protein | - |
| P5710_RS25045 (P5710_25045) | 24521..25545 | + | 1025 | Protein_22 | integrase core domain-containing protein | - |
| P5710_RS25050 (P5710_25050) | 26856..27971 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| P5710_RS25055 (P5710_25055) | 28111..31770 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| P5710_RS25060 (P5710_25060) | 31874..33103 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| P5710_RS25065 (P5710_25065) | 33188..34144 | + | 957 | WP_000271277.1 | hypothetical protein | VF |
| P5710_RS25070 (P5710_25070) | 34189..36366 | - | 2178 | WP_021534948.1 | Ferric enterobactin receptor | VF |
| P5710_RS25075 (P5710_25075) | 37211..38245 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| P5710_RS25080 (P5710_25080) | 38426..38727 | + | 302 | Protein_29 | hypothetical protein | - |
| P5710_RS25085 (P5710_25085) | 38805..39113 | - | 309 | WP_000377483.1 | DUF6404 family protein | - |
| P5710_RS25090 (P5710_25090) | 39266..39391 | - | 126 | Protein_31 | type II toxin-antitoxin system toxin YacB | - |
| P5710_RS25095 (P5710_25095) | 39391..39659 | - | 269 | Protein_32 | type II toxin-antitoxin system antitoxin YacA | - |
| P5710_RS25100 (P5710_25100) | 40270..41544 | + | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| P5710_RS25105 (P5710_25105) | 41537..43633 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| P5710_RS25110 (P5710_25110) | 43803..44114 | - | 312 | WP_001259758.1 | colicin V | - |
| P5710_RS25115 (P5710_25115) | 44092..44328 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| P5710_RS25120 (P5710_25120) | 44447..44890 | + | 444 | WP_001323891.1 | dehydrogenase | - |
| P5710_RS25125 (P5710_25125) | 44862..45266 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| P5710_RS25130 (P5710_25130) | 45268..45537 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| P5710_RS25135 (P5710_25135) | 45534..46514 | + | 981 | WP_001017347.1 | NAD(P)-binding domain-containing protein | - |
| P5710_RS25140 (P5710_25140) | 46590..46970 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| P5710_RS25145 (P5710_25145) | 46967..47314 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| P5710_RS25150 (P5710_25150) | 47364..48901 | + | 1538 | Protein_43 | IS66 family transposase ISEc8 | Transposase |
| P5710_RS25155 (P5710_25155) | 48941..49207 | + | 267 | Protein_44 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| P5710_RS25160 (P5710_25160) | 49254..49645 | - | 392 | Protein_45 | peptide deformylase | - |
| P5710_RS25165 (P5710_25165) | 49754..51553 | - | 1800 | Protein_46 | Hemoglobin-binding protease hbp autotransporter | VF |
| P5710_RS25170 (P5710_25170) | 51641..52663 | + | 1023 | WP_001350118.1 | IS21 family transposase IS100kyp | Transposase |
| P5710_RS25175 (P5710_25175) | 52660..53442 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| P5710_RS25180 (P5710_25180) | 53504..53803 | - | 300 | Protein_49 | Hemoglobin-binding protease hbp autotransporter | VF |
| P5710_RS25185 (P5710_25185) | 53809..55017 | - | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
| P5710_RS25190 (P5710_25190) | 55124..57184 | - | 2061 | Protein_51 | Hemoglobin-binding protease hbp autotransporter | VF |
| P5710_RS25195 (P5710_25195) | 57355..57546 | + | 192 | Protein_52 | IS91 family transposase | - |
| P5710_RS25200 (P5710_25200) | 57825..58082 | + | 258 | Protein_53 | IS3 family transposase IS911 | Transposase |
| P5710_RS25205 (P5710_25205) | 58150..59301 | + | 1152 | WP_021514811.1 | IS30 family transposase IS30D | Transposase |
| P5710_RS25210 (P5710_25210) | 59423..59788 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| P5710_RS25215 (P5710_25215) | 59788..60903 | + | 1116 | Protein_56 | IS91 family transposase IS91 | Transposase |
| P5710_RS25220 (P5710_25220) | 62112..62809 | + | 698 | WP_227902624.1 | IS1 family transposase IS1G | Transposase |
| P5710_RS25225 (P5710_25225) | 62824..63429 | - | 606 | Protein_58 | IS5 family transposase IS903B | Transposase |
| P5710_RS25230 (P5710_25230) | 63482..64444 | - | 963 | WP_001028756.1 | aminoimidazole riboside kinase | - |
| P5710_RS25235 (P5710_25235) | 64558..65571 | - | 1014 | WP_000800716.1 | OmpG porin family protein | - |
| P5710_RS25240 (P5710_25240) | 65584..67077 | - | 1494 | WP_021514816.1 | glycoside hydrolase family 32 protein | - |
| P5710_RS25245 (P5710_25245) | 67092..68357 | - | 1266 | WP_001313399.1 | OmpG porin family protein | - |
| P5710_RS25250 (P5710_25250) | 68450..69883 | - | 1434 | WP_000202573.1 | glycoside hydrolase family 32 protein | - |
| P5710_RS25255 (P5710_25255) | 69903..71141 | - | 1239 | WP_001313400.1 | MFS transporter | - |
| P5710_RS25260 (P5710_25260) | 71381..72376 | + | 996 | WP_021514818.1 | LacI family DNA-binding transcriptional regulator | - |
| P5710_RS25265 (P5710_25265) | 72667..73092 | - | 426 | WP_077763886.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| P5710_RS25270 (P5710_25270) | 73058..73822 | + | 765 | WP_048266684.1 | conjugal transfer pilus acetylase TraX | - |
| P5710_RS25275 (P5710_25275) | 73877..74443 | + | 567 | WP_277720321.1 | fertility inhibition protein FinO | - |
| P5710_RS25280 (P5710_25280) | 74577..74789 | + | 213 | WP_021514820.1 | hypothetical protein | - |
| P5710_RS25285 (P5710_25285) | 75034..75246 | + | 213 | Protein_70 | endonuclease | - |
| P5710_RS25290 (P5710_25290) | 75275..75553 | - | 279 | WP_233405340.1 | transposase | - |
| P5710_RS25295 (P5710_25295) | 75662..76359 | + | 698 | WP_227902624.1 | IS1 family transposase IS1G | Transposase |
| P5710_RS25300 (P5710_25300) | 76371..76655 | - | 285 | Protein_73 | fertility inhibition protein FinO | - |
| P5710_RS25305 (P5710_25305) | 76758..77618 | - | 861 | WP_237442101.1 | Quorum-quenching protein AidA | VF |
| P5710_RS25310 (P5710_25310) | 77677..78423 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| P5710_RS25315 (P5710_25315) | 78443..83713 | - | 5271 | WP_000986967.1 | Multifunctional conjugation protein TraI | Relaxase |
| P5710_RS25320 (P5710_25320) | 83795..84022 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| P5710_RS25325 (P5710_25325) | 84022..84420 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P5710_RS25330 (P5710_25330) | 84429..86582 | - | 2154 | WP_053879280.1 | type IV conjugative transfer system coupling protein TraD | - |
| P5710_RS25335 (P5710_25335) | 86834..87565 | - | 732 | WP_000850423.1 | conjugal transfer complement resistance protein TraT | - |
| P5710_RS25340 (P5710_25340) | 87579..88088 | - | 510 | WP_000628105.1 | conjugal transfer entry exclusion protein TraS | - |
| P5710_RS25345 (P5710_25345) | 88085..90910 | - | 2826 | WP_053879281.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| P5710_RS25350 (P5710_25350) | 90907..92280 | - | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| P5710_RS25355 (P5710_25355) | 92267..92659 | - | 393 | Protein_84 | F-type conjugal transfer protein TrbF | - |
| P5710_RS25360 (P5710_25360) | 92646..92987 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| P5710_RS25365 (P5710_25365) | 92917..93462 | - | 546 | WP_053879282.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| P5710_RS25370 (P5710_25370) | 93449..93733 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| P5710_RS25375 (P5710_25375) | 93814..94089 | + | 276 | WP_072164155.1 | toxin ArtA | - |
| P5710_RS25380 (P5710_25380) | 94091..94438 | - | 348 | WP_001287908.1 | conjugal transfer protein TrbA | - |
| P5710_RS25385 (P5710_25385) | 94454..95197 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| P5710_RS25390 (P5710_25390) | 95190..95447 | - | 258 | WP_000864309.1 | conjugal transfer protein TrbE | - |
| P5710_RS25395 (P5710_25395) | 95474..97282 | - | 1809 | WP_277720249.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| P5710_RS25400 (P5710_25400) | 97279..97917 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| P5710_RS25405 (P5710_25405) | 97926..98917 | - | 992 | Protein_94 | conjugal transfer pilus assembly protein TraU | - |
| P5710_RS25410 (P5710_25410) | 98914..99546 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| P5710_RS25415 (P5710_25415) | 99543..99929 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| P5710_RS25420 (P5710_25420) | 99926..102553 | - | 2628 | WP_277720254.1 | type IV secretion system protein TraC | - |
| P5710_RS25425 (P5710_25425) | 102713..102934 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| P5710_RS25430 (P5710_25430) | 103069..103584 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| P5710_RS25435 (P5710_25435) | 103581..103832 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| P5710_RS25440 (P5710_25440) | 103844..104041 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| P5710_RS25445 (P5710_25445) | 104028..104618 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| P5710_RS25450 (P5710_25450) | 104608..106035 | - | 1428 | WP_119159674.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| P5710_RS25455 (P5710_25455) | 106035..106763 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| P5710_RS25460 (P5710_25460) | 106750..107316 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| P5710_RS25465 (P5710_25465) | 107338..107649 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| P5710_RS25470 (P5710_25470) | 107664..107951 | - | 288 | Protein_107 | type IV conjugative transfer system pilin TraA | - |
| P5710_RS25475 (P5710_25475) | 108055..109263 | + | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
| P5710_RS25480 (P5710_25480) | 109278..109367 | - | 90 | Protein_109 | type IV conjugative transfer system pilin TraA | - |
| P5710_RS25485 (P5710_25485) | 109401..109628 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| P5710_RS25490 (P5710_25490) | 109722..110408 | - | 687 | WP_096959322.1 | PAS domain-containing protein | - |
| P5710_RS25495 (P5710_25495) | 110598..110981 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| P5710_RS25500 (P5710_25500) | 111316..111906 | + | 591 | WP_169284830.1 | hypothetical protein | VF |
| P5710_RS25505 (P5710_25505) | 112202..113023 | - | 822 | WP_001234490.1 | DUF932 domain-containing protein | - |
| P5710_RS25510 (P5710_25510) | 113142..113429 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| P5710_RS25515 (P5710_25515) | 113454..113660 | - | 207 | WP_000547940.1 | hypothetical protein | - |
| P5710_RS25520 (P5710_25520) | 113730..114257 | + | 528 | WP_033806434.1 | hypothetical protein | - |
| P5710_RS25525 (P5710_25525) | 114227..114418 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| P5710_RS25530 (P5710_25530) | 114415..114837 | - | 423 | WP_000271722.1 | DUF1380 family protein | - |
| P5710_RS25535 (P5710_25535) | 114884..115310 | - | 427 | Protein_120 | antirestriction protein | - |
| P5710_RS25540 (P5710_25540) | 115723..116499 | - | 777 | WP_001005035.1 | hypothetical protein | - |
| P5710_RS25545 (P5710_25545) | 116545..117099 | - | 555 | WP_077248347.1 | DUF1380 family protein | - |
| P5710_RS25550 (P5710_25550) | 116993..117214 | - | 222 | WP_001104870.1 | hypothetical protein | - |
| P5710_RS25555 (P5710_25555) | 117215..117898 | - | 684 | WP_000085939.1 | DNA methylase | - |
| P5710_RS25560 (P5710_25560) | 117975..118280 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| P5710_RS25565 (P5710_25565) | 118284..119185 | - | 902 | Protein_126 | DUF1281 domain-containing protein | - |
| P5710_RS25570 (P5710_25570) | 120052..121023 | - | 972 | WP_000817035.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| P5710_RS25575 (P5710_25575) | 121023..122189 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| P5710_RS25580 (P5710_25580) | 122777..123532 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| P5710_RS25585 (P5710_25585) | 124320..125126 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| P5710_RS25590 (P5710_25590) | 125127..125432 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| P5710_RS25595 (P5710_25595) | 125434..125652 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| P5710_RS25600 (P5710_25600) | 126240..126470 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| P5710_RS25605 (P5710_25605) | 126467..126883 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P5710_RS25610 (P5710_25610) | 126928..130722 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| P5710_RS25615 (P5710_25615) | 131103..131333 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| P5710_RS25620 (P5710_25620) | 131330..131746 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P5710_RS25625 (P5710_25625) | 131821..133386 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| P5710_RS25630 (P5710_25630) | 133371..134393 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| P5710_RS25640 (P5710_25640) | 135724..137925 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| P5710_RS25645 (P5710_25645) | 137951..139284 | - | 1334 | Protein_142 | L-lysine N6-monooxygenase | VF |
| P5710_RS25650 (P5710_25650) | 139281..141023 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| P5710_RS25655 (P5710_25655) | 141023..141970 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| P5710_RS25660 (P5710_25660) | 141971..143695 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| P5710_RS25665 (P5710_25665) | 143831..145024 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| P5710_RS25670 (P5710_25670) | 145404..145784 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| P5710_RS25675 (P5710_25675) | 146125..146538 | - | 414 | Protein_148 | phosphopyruvate hydratase | - |
| P5710_RS25680 (P5710_25680) | 146536..146793 | + | 258 | Protein_149 | Tn3 family transposase | - |
| P5710_RS25685 (P5710_25685) | 147026..147883 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| P5710_RS25690 (P5710_25690) | 147880..148737 | - | 858 | WP_021512131.1 | Manganese transport system membrane protein MntB | ARG |
| P5710_RS25695 (P5710_25695) | 148734..149561 | - | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| P5710_RS25700 (P5710_25700) | 149561..150475 | - | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| P5710_RS25705 (P5710_25705) | 150831..151528 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| P5710_RS25710 (P5710_25710) | 151708..152221 | - | 514 | Protein_155 | DUF4113 domain-containing protein | - |
| P5710_RS25715 (P5710_25715) | 152282..152386 | - | 105 | Protein_156 | AAA family ATPase | - |
| P5710_RS25720 (P5710_25720) | 152388..152711 | - | 324 | Protein_157 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|