MGE detailed information
MGE type: Prophage MGE length: 8693 bp
Accession: NZ_CP120343 Location: 308773..317465 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain PS_Mu_4_2021 Replicon: chromosome
Accession: NZ_CP120343 Location: 308773..317465 Organism: Salmonella enterica subsp. enterica serovar Paratyphi B strain PS_Mu_4_2021 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1708_RS01375 (304578) | 304578..305681 | + | 1104 | WP_001535347.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| P1708_RS01380 (305765) | 305765..305899 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| P1708_RS01385 (305877) | 305877..306260 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| P1708_RS01390 (306681) | 306681..307790 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| P1708_RS01395 (307850) | 307850..308776 | + | 927 | WP_000003005.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| P1708_RS01400 (308773) | 308773..310050 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| P1708_RS01405 (310047) | 310047..310814 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| P1708_RS01410 (310816) | 310816..311529 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| P1708_RS01415 (311661) | 311661..311882 | + | 222 | WP_001535398.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| P1708_RS01420 (311879) | 311879..312247 | + | 369 | WP_000174966.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| P1708_RS01425 (312506) | 312506..313822 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| P1708_RS01430 (313927) | 313927..314814 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| P1708_RS01435 (314811) | 314811..315656 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| P1708_RS01440 (315658) | 315658..316728 | + | 1071 | WP_000907842.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| P1708_RS01445 (316725) | 316725..317465 | + | 741 | WP_000073542.1 | glycerophosphodiester phosphodiesterase | - |
| P1708_RS01450 (317478) | 317478..317894 | - | 417 | WP_021294529.1 | DUF2756 family protein | - |
| P1708_RS01455 (318020) | 318020..319762 | + | 1743 | WP_023198067.1 | gamma-glutamyltransferase | - |
| P1708_RS01460 (319807) | 319807..320841 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| P1708_RS01465 (320838) | 320838..321809 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.009 |