MGE detailed information
MGE type: Conjugative plasmid MGE length: 101030 bp
Accession: NZ_CP119742 Location: 1..101030 Organism: Escherichia coli strain E94 Replicon: plasmid pE94-2
Accession: NZ_CP119742 Location: 1..101030 Organism: Escherichia coli strain E94 Replicon: plasmid pE94-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J23_RS26870 (892) | 892..1107 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| P1J23_RS26875 (1097) | 1097..1342 | - | 246 | WP_000356545.1 | hypothetical protein | - |
| P1J23_RS26880 (1387) | 1387..1641 | - | 255 | WP_230905640.1 | hypothetical protein | - |
| P1J23_RS26885 (1855) | 1855..2136 | - | 282 | WP_276171355.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J23_RS26890 (2126) | 2126..2317 | - | 192 | WP_001426295.1 | hypothetical protein | Antitoxin Detail |
| P1J23_RS26895 (3611) | 3611..4447 | + | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| P1J23_RS26900 (4487) | 4487..4738 | + | 252 | Protein_7 | hypothetical protein | - |
| P1J23_RS26905 (4928) | 4928..6117 | - | 1190 | Protein_8 | IS91 family transposase ISEc37 | Transposase |
| P1J23_RS26910 (6117) | 6117..6482 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| P1J23_RS26915 (6759) | 6759..7946 | - | 1188 | WP_276171320.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS26920 (7946) | 7946..8311 | - | 366 | WP_000124096.1 | hypothetical protein | - |
| P1J23_RS26925 (8393) | 8393..9805 | + | 1413 | Protein_12 | DNA topoisomerase | - |
| P1J23_RS26930 (9944) | 9944..10207 | + | 264 | WP_000063165.1 | hypothetical protein | - |
| P1J23_RS26935 (10379) | 10379..10801 | + | 423 | WP_001398192.1 | hypothetical protein | - |
| P1J23_RS26940 (11254) | 11254..11349 | + | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| P1J23_RS26945 (12140) | 12140..12613 | + | 474 | WP_001122138.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| P1J23_RS26950 (13036) | 13036..13401 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| P1J23_RS26955 (13401) | 13401..14590 | + | 1190 | Protein_18 | IS91 family transposase ISEc37 | Transposase |
| P1J23_RS26960 (14874) | 14874..15149 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J23_RS26965 (15149) | 15149..15433 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| P1J23_RS26970 (16343) | 16343..17200 | - | 858 | WP_122988880.1 | incFII family plasmid replication initiator RepA | - |
| P1J23_RS26975 (17193) | 17193..17267 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| P1J23_RS26980 (17511) | 17511..17759 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| P1J23_RS26985 (18043) | 18043..18192 | - | 150 | WP_001378818.1 | Hok/Gef family protein | - |
| P1J23_RS26990 (18449) | 18449..18913 | - | 465 | WP_000872610.1 | hypothetical protein | - |
| P1J23_RS26995 (19068) | 19068..19658 | - | 591 | WP_012817838.1 | DUF2726 domain-containing protein | - |
| P1J23_RS27000 (19978) | 19978..20655 | - | 678 | WP_000392235.1 | PIN domain-containing protein | - |
| P1J23_RS27005 (20942) | 20942..21154 | - | 213 | WP_001385659.1 | hypothetical protein | - |
| P1J23_RS27010 (21286) | 21286..21846 | - | 561 | WP_000139348.1 | fertility inhibition protein FinO | - |
| P1J23_RS27015 (21901) | 21901..22647 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| P1J23_RS27020 (22667) | 22667..27937 | - | 5271 | WP_276171323.1 | Multifunctional conjugation protein TraI | Relaxase |
| P1J23_RS27025 (27937) | 27937..30171 | - | 2235 | WP_112868866.1 | type IV conjugative transfer system coupling protein TraD | - |
| P1J23_RS27030 (30222) | 30222..30959 | - | 738 | WP_000199911.1 | hypothetical protein | - |
| P1J23_RS27035 (31162) | 31162..31893 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| P1J23_RS27040 (31907) | 31907..32416 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| P1J23_RS27045 (32413) | 32413..35238 | - | 2826 | WP_054412788.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| P1J23_RS27050 (35235) | 35235..36608 | - | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| P1J23_RS27055 (36595) | 36595..36987 | - | 393 | WP_000662237.1 | F-type conjugal transfer protein TrbF | - |
| P1J23_RS27060 (36974) | 36974..37315 | - | 342 | WP_151317910.1 | P-type conjugative transfer protein TrbJ | - |
| P1J23_RS27065 (37245) | 37245..37790 | - | 546 | WP_089560843.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| P1J23_RS27070 (37777) | 37777..38013 | - | 237 | WP_000270010.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| P1J23_RS27075 (38174) | 38174..38917 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| P1J23_RS27080 (38910) | 38910..39167 | - | 258 | WP_000864338.1 | conjugal transfer protein TrbE | - |
| P1J23_RS27085 (39194) | 39194..41044 | - | 1851 | WP_000827530.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| P1J23_RS27090 (41041) | 41041..41679 | - | 639 | WP_001104087.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| P1J23_RS27095 (41707) | 41707..42159 | - | 453 | WP_001349502.1 | hypothetical protein | - |
| P1J23_RS27100 (42189) | 42189..42650 | - | 462 | WP_219383684.1 | ATP-binding protein | - |
| P1J23_RS27105 (42676) | 42676..43668 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| P1J23_RS27110 (43665) | 43665..44297 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| P1J23_RS27115 (44294) | 44294..44680 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| P1J23_RS27120 (44677) | 44677..47304 | - | 2628 | WP_247846987.1 | type IV secretion system protein TraC | - |
| P1J23_RS27125 (47464) | 47464..47685 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| P1J23_RS27130 (47820) | 47820..48335 | - | 516 | WP_071940843.1 | type IV conjugative transfer system lipoprotein TraV | - |
| P1J23_RS27135 (48332) | 48332..48652 | - | 321 | WP_001057280.1 | conjugal transfer protein TrbD | - |
| P1J23_RS27140 (48639) | 48639..49226 | - | 588 | WP_219383688.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| P1J23_RS27145 (49216) | 49216..50643 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| P1J23_RS27150 (50643) | 50643..51371 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| P1J23_RS27155 (51358) | 51358..51924 | - | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| P1J23_RS27160 (51946) | 51946..52257 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| P1J23_RS27165 (52262) | 52262..52624 | - | 363 | WP_107236346.1 | type IV conjugative transfer system pilin TraA | - |
| P1J23_RS27170 (52657) | 52657..52884 | - | 228 | WP_000089265.1 | conjugal transfer relaxosome protein TraY | - |
| P1J23_RS27175 (53021) | 53021..53692 | - | 672 | WP_063100247.1 | conjugal transfer transcriptional regulator TraJ | - |
| P1J23_RS27180 (53884) | 53884..54267 | - | 384 | WP_001428424.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| P1J23_RS27185 (54623) | 54623..55192 | + | 570 | Protein_64 | hypothetical protein | VF |
| P1J23_RS27190 (55490) | 55490..56311 | - | 822 | WP_001234501.1 | DUF932 domain-containing protein | - |
| P1J23_RS27195 (56417) | 56417..56713 | - | 297 | WP_001272241.1 | hypothetical protein | - |
| P1J23_RS27200 (56737) | 56737..56943 | - | 207 | WP_000547944.1 | hypothetical protein | - |
| P1J23_RS27205 (57030) | 57030..57184 | + | 155 | Protein_68 | hypothetical protein | - |
| P1J23_RS27210 (57913) | 57913..59580 | + | 1668 | WP_052991863.1 | group II intron reverse transcriptase/maturase | - |
| P1J23_RS27215 (59808) | 59808..60458 | + | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| P1J23_RS27220 (60458) | 60458..60805 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS27225 (60825) | 60825..62396 | + | 1572 | WP_000381442.1 | IS66 family transposase IS679 | Transposase |
| P1J23_RS27230 (62702) | 62702..62803 | - | 102 | WP_151318007.1 | type I toxin-antitoxin system Hok family toxin | - |
| P1J23_RS27235 (62769) | 62769..62846 | - | 78 | Protein_74 | DUF5431 family protein | - |
| - (62912) | 62912..63060 | - | 149 | NuclAT_0 | - | - |
| - (62912) | 62912..63060 | - | 149 | NuclAT_0 | - | - |
| - (62912) | 62912..63060 | - | 149 | NuclAT_0 | - | - |
| - (62912) | 62912..63060 | - | 149 | NuclAT_0 | - | - |
| P1J23_RS27240 (63036) | 63036..63554 | - | 519 | WP_001178554.1 | hypothetical protein | - |
| P1J23_RS27245 (63554) | 63554..64273 | - | 720 | WP_042634414.1 | plasmid SOS inhibition protein A | - |
| P1J23_RS27250 (64270) | 64270..64704 | - | 435 | WP_053897480.1 | conjugation system SOS inhibitor PsiB | - |
| P1J23_RS27255 (64759) | 64759..66717 | - | 1959 | WP_236272997.1 | ParB/RepB/Spo0J family partition protein | - |
| P1J23_RS27260 (66781) | 66781..67014 | - | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| P1J23_RS27265 (67070) | 67070..67600 | - | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| P1J23_RS27270 (67626) | 67626..67832 | - | 207 | WP_000547945.1 | hypothetical protein | - |
| P1J23_RS27275 (67860) | 67860..68345 | + | 486 | Protein_82 | hypothetical protein | - |
| P1J23_RS27280 (68431) | 68431..68994 | - | 564 | WP_001316841.1 | class I SAM-dependent methyltransferase | - |
| P1J23_RS27285 (69041) | 69041..70402 | - | 1362 | WP_063082129.1 | DUF3560 domain-containing protein | - |
| P1J23_RS27290 (70454) | 70454..70684 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| P1J23_RS27295 (71201) | 71201..71355 | + | 155 | Protein_86 | hypothetical protein | - |
| P1J23_RS27300 (71715) | 71715..71906 | - | 192 | WP_001027504.1 | hypothetical protein | - |
| P1J23_RS27305 (71903) | 71903..72325 | - | 423 | WP_042634409.1 | DUF1380 family protein | - |
| P1J23_RS27310 (72372) | 72372..72797 | - | 426 | WP_042634408.1 | antirestriction protein | - |
| P1J23_RS27315 (73211) | 73211..73987 | - | 777 | WP_045909438.1 | hypothetical protein | - |
| P1J23_RS27320 (74038) | 74038..74554 | - | 517 | Protein_91 | DUF1380 family protein | - |
| P1J23_RS27325 (74484) | 74484..74705 | - | 222 | WP_001104893.1 | hypothetical protein | - |
| P1J23_RS27330 (74706) | 74706..75389 | - | 684 | WP_042634423.1 | DNA methylase | - |
| P1J23_RS27335 (75465) | 75465..75775 | - | 311 | Protein_94 | hypothetical protein | - |
| P1J23_RS27340 (75772) | 75772..76674 | - | 903 | WP_001393259.1 | DUF1281 domain-containing protein | - |
| P1J23_RS27345 (77113) | 77113..78072 | + | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| P1J23_RS27350 (78072) | 78072..78467 | + | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| P1J23_RS27355 (78609) | 78609..79520 | - | 912 | WP_024244186.1 | hypothetical protein | VF |
| P1J23_RS27360 (79532) | 79532..79636 | - | 105 | Protein_99 | hypothetical protein | - |
| P1J23_RS27365 (79609) | 79609..80751 | - | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| P1J23_RS27370 (81060) | 81060..81338 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| P1J23_RS27375 (81338) | 81338..81607 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| P1J23_RS27380 (81874) | 81874..83046 | + | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| P1J23_RS27385 (83046) | 83046..83438 | + | 393 | Protein_104 | IS21 family transposase IS21 | Transposase |
| P1J23_RS27390 (83487) | 83487..84832 | + | 1346 | WP_103758504.1 | IS3 family transposase ISEcB1 | Transposase |
| P1J23_RS27395 (85022) | 85022..85240 | - | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| P1J23_RS27400 (85370) | 85370..86047 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS27405 (86047) | 86047..86394 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS27410 (86414) | 86414..87985 | + | 1572 | WP_276171321.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS27415 (88355) | 88355..89032 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS27420 (89032) | 89032..89379 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS27425 (89399) | 89399..90970 | + | 1572 | WP_276171321.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS27430 (91162) | 91162..91311 | + | 150 | Protein_113 | transposase | - |
| P1J23_RS27435 (91389) | 91389..91847 | + | 459 | Protein_114 | transposase | - |
| P1J23_RS27440 (91882) | 91882..92247 | + | 366 | WP_000124135.1 | hypothetical protein | - |
| P1J23_RS27445 (92247) | 92247..93434 | + | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| P1J23_RS27450 (93622) | 93622..93873 | + | 252 | Protein_117 | hypothetical protein | - |
| P1J23_RS27455 (93926) | 93926..94408 | - | 483 | WP_042634449.1 | ATP-binding protein | - |
| P1J23_RS27465 (95448) | 95448..95663 | + | 216 | WP_015056453.1 | heat-stable enterotoxin ST-II | - |
| P1J23_RS27470 (96051) | 96051..97011 | + | 961 | Protein_121 | IS3 family transposase | - |
| P1J23_RS27475 (97016) | 97016..97342 | + | 327 | Protein_122 | oxidoreductase | - |
| P1J23_RS27480 (97380) | 97380..98060 | - | 681 | Protein_123 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS27485 (98149) | 98149..98514 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| P1J23_RS27490 (98514) | 98514..99701 | + | 1188 | WP_276171324.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS27495 (99978) | 99978..100343 | + | 366 | WP_000091308.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|