MGE detailed information
MGE type: Conjugative plasmid MGE length: 101028 bp
Accession: NZ_CP119736 Location: 1..101028 Organism: Escherichia coli strain E92 Replicon: plasmid pE92-2
Accession: NZ_CP119736 Location: 1..101028 Organism: Escherichia coli strain E92 Replicon: plasmid pE92-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J22_RS26865 (968) | 968..1402 | + | 435 | WP_053897480.1 | conjugation system SOS inhibitor PsiB | - |
| P1J22_RS26870 (1399) | 1399..2118 | + | 720 | WP_042634414.1 | plasmid SOS inhibition protein A | - |
| P1J22_RS26875 (2118) | 2118..2636 | + | 519 | WP_001178554.1 | hypothetical protein | - |
| - (2612) | 2612..2760 | + | 149 | NuclAT_0 | - | - |
| - (2612) | 2612..2760 | + | 149 | NuclAT_0 | - | - |
| - (2612) | 2612..2760 | + | 149 | NuclAT_0 | - | - |
| - (2612) | 2612..2760 | + | 149 | NuclAT_0 | - | - |
| P1J22_RS26880 (2826) | 2826..2903 | + | 78 | Protein_4 | DUF5431 family protein | - |
| P1J22_RS26885 (2869) | 2869..2970 | + | 102 | WP_151318007.1 | type I toxin-antitoxin system Hok family toxin | - |
| P1J22_RS26890 (3276) | 3276..4847 | - | 1572 | WP_000381442.1 | IS66 family transposase IS679 | Transposase |
| P1J22_RS26895 (4867) | 4867..5214 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS26900 (5214) | 5214..5864 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| P1J22_RS26905 (6092) | 6092..7759 | - | 1668 | WP_052991863.1 | group II intron reverse transcriptase/maturase | - |
| P1J22_RS26910 (8488) | 8488..8642 | - | 155 | Protein_10 | hypothetical protein | - |
| P1J22_RS26915 (8729) | 8729..8935 | + | 207 | WP_000547944.1 | hypothetical protein | - |
| P1J22_RS26920 (8959) | 8959..9255 | + | 297 | WP_001272241.1 | hypothetical protein | - |
| P1J22_RS26925 (9361) | 9361..10182 | + | 822 | WP_001234501.1 | DUF932 domain-containing protein | - |
| P1J22_RS26930 (10480) | 10480..11049 | - | 570 | Protein_14 | hypothetical protein | VF |
| P1J22_RS26935 (11405) | 11405..11788 | + | 384 | WP_001428424.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| P1J22_RS26940 (11980) | 11980..12651 | + | 672 | WP_063100247.1 | conjugal transfer transcriptional regulator TraJ | - |
| P1J22_RS26945 (12788) | 12788..13015 | + | 228 | WP_000089265.1 | conjugal transfer relaxosome protein TraY | - |
| P1J22_RS26950 (13048) | 13048..13410 | + | 363 | WP_107236346.1 | type IV conjugative transfer system pilin TraA | - |
| P1J22_RS26955 (13415) | 13415..13726 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| P1J22_RS26960 (13748) | 13748..14314 | + | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| P1J22_RS26965 (14301) | 14301..15029 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| P1J22_RS26970 (15029) | 15029..16456 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| P1J22_RS26975 (16446) | 16446..17033 | + | 588 | WP_219383688.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| P1J22_RS26980 (17020) | 17020..17340 | + | 321 | WP_001057280.1 | conjugal transfer protein TrbD | - |
| P1J22_RS26985 (17337) | 17337..17852 | + | 516 | WP_071940843.1 | type IV conjugative transfer system lipoprotein TraV | - |
| P1J22_RS26990 (17987) | 17987..18208 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| P1J22_RS26995 (18368) | 18368..20995 | + | 2628 | WP_247846987.1 | type IV secretion system protein TraC | - |
| P1J22_RS27000 (20992) | 20992..21378 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| P1J22_RS27005 (21375) | 21375..22007 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| P1J22_RS27010 (22004) | 22004..22996 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| P1J22_RS27015 (23022) | 23022..23483 | + | 462 | WP_219383684.1 | ATP-binding protein | - |
| P1J22_RS27020 (23513) | 23513..23965 | + | 453 | WP_001349502.1 | hypothetical protein | - |
| P1J22_RS27025 (23993) | 23993..24631 | + | 639 | WP_001104087.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| P1J22_RS27030 (24628) | 24628..26478 | + | 1851 | WP_000827530.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| P1J22_RS27035 (26505) | 26505..26762 | + | 258 | WP_000864338.1 | conjugal transfer protein TrbE | - |
| P1J22_RS27040 (26755) | 26755..27498 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| P1J22_RS27045 (27659) | 27659..27895 | + | 237 | WP_000270010.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| P1J22_RS27050 (27882) | 27882..28427 | + | 546 | WP_089560843.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| P1J22_RS27055 (28357) | 28357..28698 | + | 342 | WP_151317910.1 | P-type conjugative transfer protein TrbJ | - |
| P1J22_RS27060 (28685) | 28685..29077 | + | 393 | WP_000662237.1 | F-type conjugal transfer protein TrbF | - |
| P1J22_RS27065 (29064) | 29064..30437 | + | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| P1J22_RS27070 (30434) | 30434..33259 | + | 2826 | WP_054412788.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| P1J22_RS27075 (33256) | 33256..33765 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| P1J22_RS27080 (33779) | 33779..34510 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| P1J22_RS27085 (34713) | 34713..35450 | + | 738 | WP_000199911.1 | hypothetical protein | - |
| P1J22_RS27090 (35501) | 35501..37735 | + | 2235 | WP_112868866.1 | type IV conjugative transfer system coupling protein TraD | - |
| P1J22_RS27095 (37735) | 37735..43005 | + | 5271 | WP_276171323.1 | Multifunctional conjugation protein TraI | Relaxase |
| P1J22_RS27100 (43025) | 43025..43771 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| P1J22_RS27105 (43826) | 43826..44386 | + | 561 | WP_000139348.1 | fertility inhibition protein FinO | - |
| P1J22_RS27110 (44518) | 44518..44730 | + | 213 | WP_001385659.1 | hypothetical protein | - |
| P1J22_RS27115 (45017) | 45017..45694 | + | 678 | WP_000392235.1 | PIN domain-containing protein | - |
| P1J22_RS27120 (46014) | 46014..46604 | + | 591 | WP_012817838.1 | DUF2726 domain-containing protein | - |
| P1J22_RS27125 (46759) | 46759..47223 | + | 465 | WP_000872610.1 | hypothetical protein | - |
| P1J22_RS27130 (47480) | 47480..47629 | + | 150 | WP_001378818.1 | Hok/Gef family protein | - |
| P1J22_RS27135 (47913) | 47913..48161 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| P1J22_RS27140 (48405) | 48405..48479 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| P1J22_RS27145 (48472) | 48472..49329 | + | 858 | WP_122988880.1 | incFII family plasmid replication initiator RepA | - |
| P1J22_RS27150 (50239) | 50239..50523 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| P1J22_RS27155 (50523) | 50523..50798 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J22_RS27160 (51082) | 51082..52271 | - | 1190 | Protein_60 | IS91 family transposase ISEc37 | Transposase |
| P1J22_RS27165 (52271) | 52271..52636 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| P1J22_RS27170 (53059) | 53059..53532 | - | 474 | WP_001122138.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| P1J22_RS27175 (54323) | 54323..54418 | - | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| P1J22_RS27180 (54871) | 54871..55293 | - | 423 | WP_001398192.1 | hypothetical protein | - |
| P1J22_RS27185 (55465) | 55465..55728 | - | 264 | WP_000063165.1 | hypothetical protein | - |
| P1J22_RS27190 (55867) | 55867..57279 | - | 1413 | Protein_66 | DNA topoisomerase | - |
| P1J22_RS27195 (57361) | 57361..57726 | + | 366 | WP_000124096.1 | hypothetical protein | - |
| P1J22_RS27200 (57726) | 57726..58913 | + | 1188 | WP_276171320.1 | IS91 family transposase IS91 | Transposase |
| P1J22_RS27205 (59190) | 59190..59555 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| P1J22_RS27210 (59555) | 59555..60744 | + | 1190 | Protein_70 | IS91 family transposase ISEc37 | Transposase |
| P1J22_RS27215 (60934) | 60934..61185 | - | 252 | Protein_71 | hypothetical protein | - |
| P1J22_RS27220 (61225) | 61225..62061 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| P1J22_RS27225 (63295) | 63295..63546 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| P1J22_RS27230 (63536) | 63536..63817 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J22_RS27235 (63963) | 63963..64286 | + | 324 | WP_001181907.1 | hypothetical protein | - |
| P1J22_RS27240 (64331) | 64331..64576 | + | 246 | WP_000356545.1 | hypothetical protein | - |
| P1J22_RS27245 (64566) | 64566..64781 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| P1J22_RS27250 (65170) | 65170..66357 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| P1J22_RS27255 (66357) | 66357..66722 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| P1J22_RS27260 (66999) | 66999..68186 | - | 1188 | WP_276171324.1 | IS91 family transposase IS91 | Transposase |
| P1J22_RS27265 (68186) | 68186..68551 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| P1J22_RS27270 (68640) | 68640..69320 | + | 681 | Protein_82 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS27275 (69358) | 69358..69684 | - | 327 | Protein_83 | oxidoreductase | - |
| P1J22_RS27280 (69689) | 69689..70649 | - | 961 | Protein_84 | IS3 family transposase | - |
| P1J22_RS27285 (71037) | 71037..71252 | - | 216 | WP_015056453.1 | heat-stable enterotoxin ST-II | - |
| P1J22_RS27290 (71458) | 71458..72155 | + | 698 | WP_225870291.1 | IS1 family transposase IS1R | Transposase |
| P1J22_RS27295 (72292) | 72292..72774 | + | 483 | WP_042634449.1 | ATP-binding protein | - |
| P1J22_RS27300 (72827) | 72827..73078 | - | 252 | Protein_88 | hypothetical protein | - |
| P1J22_RS27305 (73266) | 73266..74453 | - | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| P1J22_RS27310 (74453) | 74453..74818 | - | 366 | WP_000124135.1 | hypothetical protein | - |
| P1J22_RS27315 (74853) | 74853..75311 | - | 459 | Protein_91 | transposase | - |
| P1J22_RS27320 (75389) | 75389..75538 | - | 150 | Protein_92 | IS3 family transposase ISKpn37 | Transposase |
| P1J22_RS27325 (75730) | 75730..77301 | - | 1572 | WP_276171321.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS27330 (77321) | 77321..77668 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS27335 (77668) | 77668..78345 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS27340 (78715) | 78715..80286 | - | 1572 | WP_276171321.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS27345 (80306) | 80306..80653 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS27350 (80653) | 80653..81330 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS27355 (81460) | 81460..81678 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| P1J22_RS27365 (83262) | 83262..83654 | - | 393 | Protein_101 | IS21 family transposase IS21 | Transposase |
| P1J22_RS27370 (83654) | 83654..84826 | - | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| P1J22_RS27375 (85093) | 85093..85362 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| P1J22_RS27380 (85362) | 85362..85640 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| P1J22_RS27385 (85949) | 85949..87091 | + | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| P1J22_RS27390 (87064) | 87064..87168 | + | 105 | Protein_106 | hypothetical protein | - |
| P1J22_RS27395 (87204) | 87204..88091 | + | 888 | WP_276171322.1 | hypothetical protein | VF |
| P1J22_RS27400 (88233) | 88233..88628 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| P1J22_RS27405 (88628) | 88628..89587 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| P1J22_RS27410 (90026) | 90026..90928 | + | 903 | WP_001393259.1 | DUF1281 domain-containing protein | - |
| P1J22_RS27415 (90925) | 90925..91235 | + | 311 | Protein_111 | hypothetical protein | - |
| P1J22_RS27420 (91311) | 91311..91994 | + | 684 | WP_042634423.1 | DNA methylase | - |
| P1J22_RS27425 (91995) | 91995..92216 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| P1J22_RS27430 (92146) | 92146..92662 | + | 517 | Protein_114 | DUF1380 family protein | - |
| P1J22_RS27435 (92713) | 92713..93489 | + | 777 | WP_045909438.1 | hypothetical protein | - |
| P1J22_RS27440 (93903) | 93903..94328 | + | 426 | WP_042634408.1 | antirestriction protein | - |
| P1J22_RS27445 (94375) | 94375..94797 | + | 423 | WP_042634409.1 | DUF1380 family protein | - |
| P1J22_RS27450 (94794) | 94794..94985 | + | 192 | WP_001027504.1 | hypothetical protein | - |
| P1J22_RS27455 (95345) | 95345..95499 | - | 155 | Protein_119 | hypothetical protein | - |
| P1J22_RS27460 (96016) | 96016..96246 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| P1J22_RS27465 (96298) | 96298..97659 | + | 1362 | WP_063082129.1 | DUF3560 domain-containing protein | - |
| P1J22_RS27470 (97706) | 97706..98269 | + | 564 | WP_001316841.1 | class I SAM-dependent methyltransferase | - |
| P1J22_RS27475 (98355) | 98355..98840 | - | 486 | Protein_123 | hypothetical protein | - |
| P1J22_RS27480 (98868) | 98868..99074 | + | 207 | WP_000547945.1 | hypothetical protein | - |
| P1J22_RS27485 (99100) | 99100..99630 | + | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| P1J22_RS27490 (99686) | 99686..99919 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|