MGE detailed information
MGE type: Genomic_island MGE length: 12214 bp
Accession: NZ_CP118050 Location: 513060..525273 Organism: Lacticaseibacillus rhamnosus strain VSI43 Replicon: chromosome
Accession: NZ_CP118050 Location: 513060..525273 Organism: Lacticaseibacillus rhamnosus strain VSI43 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUW66_RS02405 (PUW66_02405) | 508932..509063 | - | 132 | WP_275016935.1 | hypothetical protein | - |
| PUW66_RS02410 (PUW66_02410) | 509149..509715 | - | 567 | WP_005691618.1 | TetR/AcrR family transcriptional regulator | - |
| PUW66_RS02415 (PUW66_02415) | 509805..510173 | - | 369 | WP_005686376.1 | dihydroxyacetone kinase phosphoryl donor subunit DhaM | - |
| PUW66_RS02420 (PUW66_02420) | 510322..510903 | - | 582 | WP_005691622.1 | dihydroxyacetone kinase subunit DhaL | - |
| PUW66_RS02425 (PUW66_02425) | 510890..511909 | - | 1020 | WP_005691624.1 | dihydroxyacetone kinase subunit DhaK | - |
| PUW66_RS02430 (PUW66_02430) | 512102..512530 | - | 429 | WP_005691626.1 | OsmC family protein | - |
| PUW66_RS02435 (PUW66_02435) | 513060..513749 | + | 690 | WP_005691628.1 | rhomboid family intramembrane serine protease | - |
| PUW66_RS02440 (PUW66_02440) | 514241..514849 | - | 609 | WP_005691630.1 | hypothetical protein | - |
| PUW66_RS02445 (PUW66_02445) | 515296..516171 | + | 876 | WP_024305787.1 | XRE family transcriptional regulator | - |
| PUW66_RS02450 (PUW66_02450) | 516414..517829 | - | 1416 | WP_005691634.1 | exonuclease domain-containing protein | - |
| PUW66_RS02455 (PUW66_02455) | 518053..518238 | - | 186 | WP_005691636.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| PUW66_RS02460 (PUW66_02460) | 518266..518538 | - | 273 | WP_014571130.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PUW66_RS02465 (PUW66_02465) | 519100..519348 | + | 249 | WP_005691639.1 | hypothetical protein | - |
| PUW66_RS02470 (PUW66_02470) | 519591..519884 | + | 294 | WP_005684269.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PUW66_RS02475 (PUW66_02475) | 519966..521129 | + | 1164 | WP_005691640.1 | MFS transporter | - |
| PUW66_RS02480 (PUW66_02480) | 521283..521858 | + | 576 | WP_014571131.1 | DNA-3-methyladenine glycosylase I | - |
| PUW66_RS02485 (PUW66_02485) | 522001..522597 | + | 597 | WP_005691643.1 | IS607 family transposase ISCbt3 | Transposase |
| PUW66_RS02490 (PUW66_02490) | 522632..523813 | + | 1182 | WP_014571132.1 | RNA-guided endonuclease TnpB family protein | - |
| PUW66_RS02495 (PUW66_02495) | 524045..524263 | + | 219 | WP_005691646.1 | hypothetical protein | - |
| PUW66_RS02500 (PUW66_02500) | 524392..525273 | - | 882 | WP_005684263.1 | class II fructose-1,6-bisphosphate aldolase | - |
| PUW66_RS02505 (PUW66_02505) | 525862..527595 | + | 1734 | WP_275016820.1 | pyruvate oxidase | - |
| PUW66_RS02510 (PUW66_02510) | 527807..528094 | - | 288 | WP_005691648.1 | hypothetical protein | - |
| PUW66_RS02515 (PUW66_02515) | 528297..529311 | - | 1015 | Protein_499 | serine hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Lactobacillus rhamnosus Lc 705 | Genomic island | TA6139 | NC_013199 | 509097..519119 | 0.005 | |
| Lactobacillus rhamnosus ATCC 8530 | Genomic island | TA6144, TA6239 | NC_017491 | 509273..519295 | 0.005 |