MGE detailed information
MGE type: Genomic_island MGE length: 43619 bp
Accession: NZ_CP117851 Location: 2508563..2552181 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_B30R Replicon: chromosome
Accession: NZ_CP117851 Location: 2508563..2552181 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_B30R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTZ67_RS12105 () | 2504461..2504751 | + | 291 | WP_000175471.1 | hypothetical protein | - |
| PTZ67_RS12110 () | 2504813..2505355 | + | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PTZ67_RS12115 () | 2505379..2506887 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PTZ67_RS12120 () | 2506950..2507060 | + | 111 | WP_077907261.1 | BPSL0067 family protein | - |
| PTZ67_RS12125 () | 2507187..2507519 | + | 333 | WP_077905251.1 | hypothetical protein | - |
| PTZ67_RS12130 () | 2507773..2508258 | + | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| PTZ67_RS12135 () | 2508326..2508520 | + | 195 | Protein_2353 | type VI secretion system lipoprotein TssJ | - |
| PTZ67_RS12140 () | 2508563..2509048 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PTZ67_RS12145 () | 2509033..2509416 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PTZ67_RS12150 () | 2509559..2510044 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| PTZ67_RS12155 () | 2510111..2510647 | + | 537 | WP_001007104.1 | hypothetical protein | VF |
| PTZ67_RS12160 () | 2510651..2511994 | + | 1344 | WP_017442155.1 | hypothetical protein | VF |
| PTZ67_RS12165 () | 2511991..2513295 | + | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| PTZ67_RS12170 () | 2513300..2514073 | + | 774 | WP_017442156.1 | Rap1a/Tai family immunity protein | - |
| PTZ67_RS12175 () | 2514275..2514706 | + | 432 | WP_077907262.1 | Shiga toxin A subunit | - |
| PTZ67_RS12180 () | 2514740..2518609 | + | 3870 | WP_017442158.1 | hypothetical protein | VF |
| PTZ67_RS12185 () | 2518609..2519376 | + | 768 | WP_001254130.1 | TagF domain-containing protein | - |
| PTZ67_RS12190 () | 2519419..2519889 | + | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| PTZ67_RS12195 () | 2519874..2520335 | + | 462 | WP_023218482.1 | hypothetical protein | - |
| PTZ67_RS12200 () | 2520371..2520466 | + | 96 | Protein_2366 | cytoplasmic protein | - |
| PTZ67_RS12205 () | 2520463..2520879 | + | 417 | WP_000759645.1 | DUF2195 family protein | - |
| PTZ67_RS12210 () | 2520903..2521424 | + | 522 | WP_077907259.1 | DUF2778 domain-containing protein | - |
| PTZ67_RS12215 () | 2521820..2524054 | + | 2235 | WP_017442160.1 | Actin cross-linking toxin VgrG1 | VF |
| PTZ67_RS12220 () | 2524114..2524572 | + | 459 | WP_000186513.1 | DcrB-related protein | - |
| PTZ67_RS12225 () | 2524588..2529273 | + | 4686 | WP_017442161.1 | putative deoxyribonuclease RhsA | VF |
| PTZ67_RS12230 () | 2529278..2529556 | + | 279 | WP_017442162.1 | hypothetical protein | - |
| PTZ67_RS12235 () | 2529603..2529809 | - | 207 | WP_026080916.1 | SymE family type I addiction module toxin | Toxin Detail |
| PTZ67_RS12240 () | 2529803..2531056 | + | 1254 | Protein_2374 | Putative deoxyribonuclease RhsC | VF |
| PTZ67_RS12245 () | 2531059..2531346 | + | 288 | WP_017442165.1 | hypothetical protein | - |
| PTZ67_RS12250 () | 2531415..2531549 | - | 135 | Protein_2376 | SymE family type I addiction module toxin | - |
| PTZ67_RS12255 () | 2531975..2532943 | + | 969 | Protein_2377 | Protein RhsC | VF |
| PTZ67_RS12260 () | 2532937..2533383 | + | 447 | WP_000935097.1 | protein SciX | - |
| PTZ67_RS12265 () | 2533902..2534384 | + | 483 | WP_017442170.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PTZ67_RS12270 () | 2534437..2534682 | - | 246 | WP_026080917.1 | SymE family type I addiction module toxin | Toxin Detail |
| PTZ67_RS12275 () | 2534847..2534963 | + | 117 | Protein_2381 | RHS repeat-associated core domain-containing protein | - |
| PTZ67_RS12280 () | 2535078..2535359 | + | 282 | WP_176132412.1 | hypothetical protein | - |
| PTZ67_RS12285 () | 2535356..2535802 | + | 447 | WP_017442172.1 | hypothetical protein | - |
| PTZ67_RS12290 () | 2536161..2536313 | + | 153 | WP_223195354.1 | hypothetical protein | - |
| PTZ67_RS12295 () | 2536334..2536612 | + | 279 | WP_197398372.1 | hypothetical protein | - |
| PTZ67_RS12300 () | 2536614..2537192 | + | 579 | WP_017442174.1 | hypothetical protein | - |
| PTZ67_RS12305 () | 2537397..2537774 | + | 378 | WP_223195355.1 | HNH endonuclease | - |
| PTZ67_RS12310 () | 2537771..2538127 | + | 357 | WP_017442175.1 | hypothetical protein | - |
| PTZ67_RS12315 () | 2538194..2538439 | - | 246 | WP_017442176.1 | hypothetical protein | Toxin Detail |
| - | 2538289..2538596 | + | 308 | - | - | Antitoxin Detail |
| PTZ67_RS12320 () | 2538773..2539066 | + | 294 | WP_129369132.1 | hypothetical protein | - |
| PTZ67_RS12325 () | 2539516..2539887 | + | 372 | WP_223195353.1 | hypothetical protein | - |
| PTZ67_RS12330 () | 2539884..2540351 | + | 468 | WP_017442178.1 | hypothetical protein | - |
| PTZ67_RS12335 () | 2540669..2540947 | + | 279 | WP_077907264.1 | hypothetical protein | - |
| PTZ67_RS12340 () | 2541014..2541328 | - | 315 | WP_072103451.1 | SymE family type I addiction module toxin | - |
| PTZ67_RS12345 () | 2541381..2541539 | + | 159 | Protein_2395 | transposase | - |
| PTZ67_RS12350 () | 2541607..2542164 | - | 558 | Protein_2396 | IS21 family transposase ISEc62 | Transposase |
| PTZ67_RS12355 () | 2543202..2543912 | + | 711 | WP_001009507.1 | hypothetical protein | VF |
| PTZ67_RS12360 () | 2544020..2544538 | + | 519 | WP_001056553.1 | CFA/I fimbrial subunit B | VF |
| PTZ67_RS12365 () | 2544647..2547334 | + | 2688 | WP_017442183.1 | hypothetical protein | VF |
| PTZ67_RS12370 () | 2547369..2548415 | + | 1047 | WP_086013164.1 | CfaE/CblD family pilus tip adhesin | - |
| PTZ67_RS12375 () | 2548548..2549003 | + | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| PTZ67_RS12380 () | 2549143..2549760 | + | 618 | WP_017442092.1 | protein TioA | - |
| PTZ67_RS12385 () | 2550363..2550496 | - | 134 | Protein_2403 | transposase | - |
| PTZ67_RS12390 () | 2550532..2550720 | + | 189 | Protein_2404 | hypothetical protein | - |
| PTZ67_RS12395 () | 2550724..2551443 | - | 720 | WP_000787605.1 | Outer membrane protein PagN | VF |
| PTZ67_RS12400 () | 2551774..2552181 | - | 408 | WP_001642720.1 | Spy/CpxP family protein refolding chaperone | - |
| PTZ67_RS12405 () | 2552491..2553258 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| PTZ67_RS12410 () | 2553367..2555811 | - | 2445 | WP_000973043.1 | acyl-CoA dehydrogenase FadE | - |
| PTZ67_RS12415 () | 2556051..2556629 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|