MGE detailed information
MGE type: Genomic_island MGE length: 44371 bp
Accession: NZ_CP117850 Location: 4560547..4604917 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_F22R Replicon: chromosome
Accession: NZ_CP117850 Location: 4560547..4604917 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_F22R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTZ65_RS22390 () | 4556179..4558623 | + | 2445 | WP_000973043.1 | acyl-CoA dehydrogenase FadE | - |
| PTZ65_RS22395 () | 4558732..4559499 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PTZ65_RS22400 () | 4559809..4560216 | + | 408 | WP_001642720.1 | Spy/CpxP family protein refolding chaperone | - |
| PTZ65_RS22405 () | 4560547..4561266 | + | 720 | WP_000787605.1 | Outer membrane protein PagN | VF |
| PTZ65_RS22410 () | 4561270..4561458 | - | 189 | Protein_4370 | hypothetical protein | - |
| PTZ65_RS22415 () | 4561494..4561627 | + | 134 | Protein_4371 | transposase | - |
| PTZ65_RS22420 () | 4562230..4562847 | - | 618 | WP_017442092.1 | protein TioA | - |
| PTZ65_RS22425 () | 4562987..4563442 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| PTZ65_RS22430 () | 4563575..4564621 | - | 1047 | WP_086013164.1 | CfaE/CblD family pilus tip adhesin | - |
| PTZ65_RS22435 () | 4564656..4567343 | - | 2688 | WP_017442183.1 | hypothetical protein | VF |
| PTZ65_RS22440 () | 4567452..4568027 | - | 576 | WP_000287812.1 | CFA/I fimbrial subunit B | VF |
| PTZ65_RS22445 () | 4568078..4568788 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| PTZ65_RS22450 () | 4569826..4570383 | + | 558 | Protein_4378 | IS21 family transposase ISEc62 | Transposase |
| PTZ65_RS22455 () | 4570451..4570609 | - | 159 | Protein_4379 | transposase | - |
| PTZ65_RS22460 () | 4570662..4570976 | + | 315 | WP_072103451.1 | SymE family type I addiction module toxin | - |
| PTZ65_RS22465 () | 4571043..4571321 | - | 279 | WP_077907264.1 | hypothetical protein | - |
| PTZ65_RS22470 () | 4571639..4572106 | - | 468 | WP_017442178.1 | hypothetical protein | - |
| PTZ65_RS22475 () | 4572103..4572474 | - | 372 | WP_223195353.1 | hypothetical protein | - |
| PTZ65_RS22480 () | 4572924..4573217 | - | 294 | WP_129369132.1 | hypothetical protein | - |
| PTZ65_RS22485 () | 4573551..4573796 | + | 246 | WP_017442176.1 | hypothetical protein | Toxin Detail |
| PTZ65_RS22490 () | 4573863..4574219 | - | 357 | WP_017442175.1 | hypothetical protein | - |
| PTZ65_RS22495 () | 4574216..4574593 | - | 378 | WP_223195355.1 | HNH endonuclease | - |
| PTZ65_RS22500 () | 4574798..4575376 | - | 579 | WP_017442174.1 | hypothetical protein | - |
| PTZ65_RS22505 () | 4575378..4575656 | - | 279 | WP_197398372.1 | hypothetical protein | - |
| PTZ65_RS22510 () | 4575677..4575829 | - | 153 | WP_223195354.1 | hypothetical protein | - |
| PTZ65_RS22515 () | 4576188..4576634 | - | 447 | WP_017442172.1 | hypothetical protein | - |
| PTZ65_RS22520 () | 4576631..4576912 | - | 282 | WP_176132412.1 | hypothetical protein | - |
| PTZ65_RS22525 () | 4577027..4577143 | - | 117 | Protein_4393 | RHS repeat-associated core domain-containing protein | - |
| PTZ65_RS22530 () | 4577308..4577553 | + | 246 | WP_026080917.1 | SymE family type I addiction module toxin | Toxin Detail |
| PTZ65_RS22535 () | 4577606..4578088 | - | 483 | WP_017442170.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PTZ65_RS22540 () | 4578607..4579053 | - | 447 | WP_000935097.1 | protein SciX | - |
| PTZ65_RS22545 () | 4579047..4580015 | - | 969 | Protein_4397 | Protein RhsC | VF |
| PTZ65_RS22550 () | 4580441..4580575 | + | 135 | Protein_4398 | SymE family type I addiction module toxin | - |
| PTZ65_RS22555 () | 4580644..4580931 | - | 288 | WP_017442165.1 | hypothetical protein | - |
| PTZ65_RS22560 () | 4580934..4582187 | - | 1254 | Protein_4400 | Putative deoxyribonuclease RhsC | VF |
| PTZ65_RS22565 () | 4582181..4582387 | + | 207 | WP_026080916.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 4582192..4582377 | - | 186 | - | - | Antitoxin Detail |
| PTZ65_RS22570 () | 4582434..4582712 | - | 279 | WP_017442162.1 | hypothetical protein | - |
| PTZ65_RS22575 () | 4582717..4587402 | - | 4686 | WP_017442161.1 | putative deoxyribonuclease RhsA | VF |
| PTZ65_RS22580 () | 4587418..4587876 | - | 459 | WP_000186513.1 | DcrB-related protein | - |
| PTZ65_RS22585 () | 4587936..4590170 | - | 2235 | WP_017442160.1 | Actin cross-linking toxin VgrG1 | VF |
| PTZ65_RS22590 () | 4590566..4591087 | - | 522 | WP_077907259.1 | DUF2778 domain-containing protein | - |
| PTZ65_RS22595 () | 4591111..4591527 | - | 417 | WP_000759645.1 | DUF2195 family protein | - |
| PTZ65_RS22600 () | 4591524..4591619 | - | 96 | Protein_4408 | cytoplasmic protein | - |
| PTZ65_RS22605 () | 4591655..4592116 | - | 462 | WP_023218482.1 | hypothetical protein | - |
| PTZ65_RS22610 () | 4592101..4592571 | - | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| PTZ65_RS22615 () | 4592614..4593381 | - | 768 | WP_001254130.1 | TagF domain-containing protein | - |
| PTZ65_RS22620 () | 4593381..4597250 | - | 3870 | WP_017442158.1 | hypothetical protein | VF |
| PTZ65_RS22625 () | 4597284..4597715 | - | 432 | WP_077907262.1 | Shiga toxin A subunit | - |
| PTZ65_RS22630 () | 4597917..4598690 | - | 774 | WP_017442156.1 | Rap1a/Tai family immunity protein | - |
| PTZ65_RS22635 () | 4598695..4599999 | - | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| PTZ65_RS22640 () | 4599996..4601339 | - | 1344 | WP_017442155.1 | hypothetical protein | VF |
| PTZ65_RS22645 () | 4601343..4601879 | - | 537 | WP_001007104.1 | hypothetical protein | VF |
| PTZ65_RS22650 () | 4601946..4602431 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| PTZ65_RS22655 () | 4602574..4602957 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PTZ65_RS22660 () | 4602942..4603427 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PTZ65_RS22665 () | 4603470..4603664 | - | 195 | Protein_4421 | type VI secretion system lipoprotein TssJ | - |
| PTZ65_RS22670 () | 4603732..4604217 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| PTZ65_RS22675 () | 4604471..4604803 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| PTZ65_RS22680 () | 4604930..4605088 | - | 159 | WP_223229060.1 | BPSL0067 family protein | - |
| PTZ65_RS22685 () | 4605103..4606611 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PTZ65_RS22690 () | 4606635..4607177 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PTZ65_RS22695 () | 4607239..4607529 | - | 291 | WP_000175471.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|