MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88280 bp
Accession: NZ_CP117680 Location: 1..88280 Organism: Escherichia albertii strain BIA_4 Replicon: plasmid pEA4_88
Accession: NZ_CP117680 Location: 1..88280 Organism: Escherichia albertii strain BIA_4 Replicon: plasmid pEA4_88
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS033_RS24035 (1) | 1..984 | + | 984 | WP_059268664.1 | RepB family plasmid replication initiator protein | - |
| PS033_RS24040 (1263) | 1263..2008 | - | 746 | Protein_1 | site-specific integrase | - |
| PS033_RS24045 (2129) | 2129..2317 | - | 189 | WP_072254456.1 | hypothetical protein | - |
| PS033_RS24050 (2232) | 2232..2420 | + | 189 | Protein_3 | IS21 family transposase | - |
| PS033_RS24055 (2435) | 2435..3169 | + | 735 | WP_059268661.1 | IS21 family transposase ISEc12 | Transposase |
| PS033_RS24060 (3174) | 3174..3355 | + | 182 | Protein_5 | IS481 family transposase | - |
| PS033_RS24065 (3631) | 3631..4666 | + | 1036 | Protein_6 | hypothetical protein | VF |
| PS033_RS24070 (4936) | 4936..5077 | + | 142 | Protein_7 | IS3 family transposase | - |
| PS033_RS24075 (5432) | 5432..7501 | + | 2070 | WP_059268963.1 | prolyl oligopeptidase family serine peptidase | - |
| PS033_RS24080 (7651) | 7651..7963 | - | 313 | Protein_9 | ATP-binding protein | - |
| PS033_RS24085 (7912) | 7912..8058 | - | 147 | WP_171002508.1 | hypothetical protein | - |
| PS033_RS24090 (8083) | 8083..9009 | + | 927 | Protein_11 | IS110 family transposase ISEc32 | Transposase |
| PS033_RS24095 (9273) | 9273..10094 | + | 822 | WP_059268961.1 | polysaccharide deacetylase family protein | - |
| PS033_RS24100 (10094) | 10094..11200 | + | 1107 | WP_076745710.1 | glycosyltransferase family 4 protein | - |
| PS033_RS24105 (11371) | 11371..11640 | + | 270 | Protein_14 | IS3 family transposase IS1203 | Transposase |
| PS033_RS24110 (11919) | 11919..12836 | + | 918 | WP_059268957.1 | VirK/YbjX family protein | - |
| PS033_RS24115 (12826) | 12826..12924 | - | 99 | Protein_16 | transposase | - |
| PS033_RS24120 (13051) | 13051..13158 | - | 108 | Protein_17 | type II toxin-antitoxin system antitoxin YacA | - |
| PS033_RS24125 (13189) | 13189..13314 | - | 126 | WP_262932779.1 | hypothetical protein | - |
| PS033_RS24130 (13402) | 13402..13818 | - | 417 | Protein_19 | plasmid replication initiator RepA | - |
| PS033_RS24135 (13857) | 13857..14441 | - | 585 | Protein_20 | type-F conjugative transfer system pilin acetylase TraX | - |
| PS033_RS24140 (14518) | 14518..14967 | - | 450 | Protein_21 | IS21 family transposase IS21 | Transposase |
| PS033_RS24145 (14967) | 14967..16026 | - | 1060 | Protein_22 | IS21 family transposase IS21 | Transposase |
| PS033_RS24150 (16213) | 16213..16521 | + | 309 | Protein_23 | reverse transcriptase N-terminal domain-containing protein | - |
| PS033_RS24155 (16939) | 16939..17739 | + | 801 | WP_059268953.1 | response regulator transcription factor | - |
| PS033_RS24160 (18085) | 18085..18261 | + | 177 | Protein_25 | AAA family ATPase | - |
| PS033_RS24165 (18729) | 18729..19817 | + | 1089 | WP_059268949.1 | glycosyltransferase | - |
| PS033_RS24170 (20772) | 20772..21305 | - | 534 | Protein_27 | IS3 family transposase ISKpn38 | Transposase |
| PS033_RS24175 (21425) | 21425..22063 | - | 639 | WP_059269188.1 | DsbA family protein | - |
| PS033_RS24180 (22102) | 22102..22275 | - | 174 | WP_240645352.1 | FaeA/PapI family transcriptional regulator | - |
| PS033_RS24185 (22360) | 22360..23178 | - | 819 | WP_273780469.1 | hypothetical protein | - |
| PS033_RS24190 (23200) | 23200..23691 | - | 492 | WP_137647822.1 | hypothetical protein | - |
| PS033_RS24195 (23719) | 23719..24219 | - | 501 | WP_059269164.1 | F18 fimbrial protein FedE | - |
| PS033_RS24200 (24206) | 24206..24898 | - | 693 | WP_262932835.1 | hypothetical protein | VF |
| PS033_RS24205 (24891) | 24891..27293 | - | 2403 | WP_262932834.1 | hypothetical protein | VF |
| PS033_RS24210 (27390) | 27390..27902 | - | 513 | WP_059269141.1 | hypothetical protein | VF |
| PS033_RS24215 (28124) | 28124..28396 | - | 273 | WP_077871273.1 | hypothetical protein | VF |
| PS033_RS24220 (29072) | 29072..29334 | + | 263 | Protein_37 | group II intron maturase-specific domain-containing protein | - |
| PS033_RS24225 (29365) | 29365..30929 | - | 1565 | Protein_38 | IS66 family transposase ISEc43 | Transposase |
| PS033_RS24230 (30960) | 30960..31310 | - | 351 | WP_001565133.1 | IS66 family transposase ISEc47 | Transposase |
| PS033_RS24235 (31307) | 31307..31663 | - | 357 | WP_273780477.1 | IS66 family transposase ISEc43 | Transposase |
| PS033_RS24240 (32648) | 32648..32819 | + | 172 | Protein_41 | FimD/PapC N-terminal domain-containing protein | - |
| PS033_RS24245 (33242) | 33242..33415 | + | 174 | WP_240645352.1 | hypothetical protein | VF |
| PS033_RS24250 (33454) | 33454..34092 | + | 639 | WP_059269188.1 | DsbA family protein | - |
| PS033_RS24255 (34387) | 34387..34656 | + | 270 | WP_273780478.1 | hypothetical protein | - |
| PS033_RS24260 (35042) | 35042..36268 | + | 1227 | WP_059269009.1 | phosphoadenosine phosphosulfate reductase | - |
| PS033_RS24265 (36253) | 36253..36891 | + | 639 | WP_059269007.1 | ParB N-terminal domain-containing protein | - |
| PS033_RS24270 (37202) | 37202..38413 | + | 1212 | WP_149010571.1 | IS256 family transposase ISSod4 | Transposase |
| PS033_RS24275 (38413) | 38413..38808 | + | 396 | WP_059269005.1 | plasmid partitioning/stability family protein | - |
| PS033_RS24280 (40217) | 40217..40576 | + | 360 | Protein_49 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| PS033_RS24285 (40971) | 40971..41336 | - | 366 | WP_149010249.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PS033_RS24290 (41305) | 41305..41562 | - | 258 | WP_024257462.1 | antitoxin | - |
| PS033_RS24295 (41988) | 41988..42599 | - | 612 | WP_059269001.1 | hypothetical protein | - |
| PS033_RS24300 (43171) | 43171..43374 | - | 204 | Protein_53 | hypothetical protein | - |
| PS033_RS24305 (43390) | 43390..43785 | - | 396 | WP_059268998.1 | hypothetical protein | - |
| PS033_RS24310 (43826) | 43826..44032 | - | 207 | WP_000561970.1 | hypothetical protein | - |
| PS033_RS24315 (44220) | 44220..45050 | - | 831 | WP_059245513.1 | toll/interleukin-1 receptor domain-containing protein | - |
| PS033_RS24320 (45063) | 45063..45497 | - | 435 | WP_059245512.1 | hypothetical protein | - |
| PS033_RS24325 (45567) | 45567..45839 | - | 273 | WP_215203002.1 | type II toxin-antitoxin system toxin YacB | - |
| PS033_RS24330 (45787) | 45787..45972 | - | 186 | Protein_59 | hypothetical protein | - |
| PS033_RS24335 (46819) | 46819..47841 | - | 1023 | WP_059268994.1 | plasmid replication initiator RepA | - |
| PS033_RS24340 (47831) | 47831..48364 | - | 534 | WP_040089446.1 | plasmid replication initiator RepA | - |
| PS033_RS24345 (48357) | 48357..48431 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| PS033_RS24350 (48663) | 48663..48920 | - | 258 | WP_001136636.1 | replication regulatory protein RepA | - |
| PS033_RS24355 (49228) | 49228..49710 | - | 483 | WP_000405250.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PS033_RS24360 (49701) | 49701..50003 | - | 303 | WP_072146426.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PS033_RS24365 (50324) | 50324..50472 | - | 149 | Protein_66 | Hok/Gef family protein | - |
| PS033_RS24370 (50536) | 50536..51609 | + | 1074 | WP_273780437.1 | IS481 family transposase ISKpn28 | Transposase |
| - (51611) | 51611..51764 | - | 154 | NuclAT_0 | - | - |
| - (51611) | 51611..51764 | - | 154 | NuclAT_0 | - | - |
| - (51611) | 51611..51764 | - | 154 | NuclAT_0 | - | - |
| - (51611) | 51611..51764 | - | 154 | NuclAT_0 | - | - |
| PS033_RS24375 (51904) | 51904..52504 | - | 601 | Protein_68 | IS66 family transposase ISSfl3 | Transposase |
| PS033_RS24380 (52527) | 52527..53141 | + | 615 | Protein_69 | transposase | - |
| PS033_RS24385 (53427) | 53427..53909 | + | 483 | WP_059268697.1 | hypothetical protein | - |
| PS033_RS24390 (53920) | 53920..55923 | + | 2004 | WP_059268695.1 | AAA family ATPase | - |
| PS033_RS24395 (56046) | 56046..57612 | - | 1567 | Protein_72 | IS66 family transposase ISCro1 | Transposase |
| PS033_RS24400 (57632) | 57632..57979 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| PS033_RS24405 (57979) | 57979..58626 | - | 648 | WP_059268691.1 | IS66 family transposase ISCro1 | Transposase |
| PS033_RS24410 (58907) | 58907..59662 | - | 756 | WP_000807692.1 | replication initiation protein RepE | - |
| PS033_RS24415 (60071) | 60071..60877 | - | 807 | WP_059268688.1 | site-specific integrase | - |
| PS033_RS24420 (60878) | 60878..61183 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PS033_RS24425 (61185) | 61185..61403 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PS033_RS24430 (62032) | 62032..62262 | + | 231 | WP_059268686.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PS033_RS24435 (62259) | 62259..62675 | + | 417 | WP_042093420.1 | PIN domain-containing protein | Toxin Detail |
| PS033_RS24440 (62845) | 62845..64983 | - | 2139 | WP_059268683.1 | AAA family ATPase | - |
| PS033_RS24445 (65548) | 65548..66504 | - | 957 | WP_187646074.1 | HTH-type transcriptional regulator HdfR | VF |
| PS033_RS24450 (66638) | 66638..67786 | + | 1149 | WP_033548901.1 | iron-containing alcohol dehydrogenase | - |
| PS033_RS24455 (67853) | 67853..68680 | + | 828 | WP_059268682.1 | SDR family oxidoreductase | - |
| PS033_RS24460 (69303) | 69303..69563 | + | 261 | WP_059268681.1 | hypothetical protein | - |
| PS033_RS24465 (69560) | 69560..69931 | + | 372 | WP_059268679.1 | hypothetical protein | - |
| PS033_RS24470 (70488) | 70488..71666 | - | 1179 | WP_237764536.1 | hypothetical protein | - |
| PS033_RS24475 (71712) | 71712..72227 | - | 516 | WP_059268677.1 | fimbrial protein | - |
| PS033_RS24480 (72294) | 72294..72980 | - | 687 | WP_059268676.1 | fimbria/pilus periplasmic chaperone | - |
| PS033_RS24485 (72971) | 72971..75478 | - | 2508 | WP_059268675.1 | hypothetical protein | VF |
| PS033_RS24490 (75506) | 75506..75832 | - | 327 | WP_273780492.1 | fimbria/pilus periplasmic chaperone | - |
| PS033_RS24495 (75927) | 75927..76631 | - | 705 | WP_059268673.1 | hypothetical protein | VF |
| PS033_RS24500 (76711) | 76711..77295 | - | 585 | WP_059268672.1 | hypothetical protein | VF |
| PS033_RS24505 (77513) | 77513..77797 | - | 285 | Protein_94 | IS3 family transposase ISLad1 | Transposase |
| PS033_RS24510 (78240) | 78240..78506 | - | 267 | WP_059268671.1 | PerC family transcriptional regulator | - |
| PS033_RS24515 (78775) | 78775..79464 | - | 690 | WP_059268670.1 | IS21 family transposase IS100kyp | Transposase |
| PS033_RS24520 (79472) | 79472..80483 | - | 1012 | Protein_97 | IS21 family transposase IS100kyp | Transposase |
| PS033_RS24525 (80564) | 80564..81606 | + | 1043 | Protein_98 | Lipid A biosynthesis myristoyltransferase | VF |
| PS033_RS24530 (82451) | 82451..83380 | - | 930 | Protein_99 | reverse transcriptase domain-containing protein | - |
| PS033_RS24535 (83399) | 83399..83557 | - | 159 | WP_237764533.1 | hypothetical protein | - |
| PS033_RS24540 (83719) | 83719..83986 | - | 268 | Protein_101 | transposase | - |
| PS033_RS24545 (84122) | 84122..84409 | - | 288 | WP_059268668.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS033_RS24550 (84406) | 84406..84657 | - | 252 | WP_001132891.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| PS033_RS24555 (85171) | 85171..86142 | - | 972 | WP_059268667.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| PS033_RS24560 (86142) | 86142..87308 | - | 1167 | WP_059268666.1 | plasmid-partitioning protein SopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|