MGE detailed information
MGE type: Conjugative plasmid MGE length: 143188 bp
Accession: NZ_CP117576 Location: 1..143188 Organism: Escherichia albertii strain BIA_5 Replicon: plasmid pEA5_1
Accession: NZ_CP117576 Location: 1..143188 Organism: Escherichia albertii strain BIA_5 Replicon: plasmid pEA5_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS037_RS23110 (1) | 1..978 | + | 978 | WP_273821942.1 | RepB family plasmid replication initiator protein | - |
| PS037_RS23115 (1206) | 1206..1919 | - | 714 | Protein_1 | site-specific integrase | - |
| PS037_RS23120 (2008) | 2008..2142 | - | 135 | Protein_2 | serine/threonine protein kinase | - |
| PS037_RS23125 (2254) | 2254..3633 | + | 1380 | WP_273821943.1 | radical SAM protein | - |
| PS037_RS23130 (4154) | 4154..4729 | + | 576 | WP_273821944.1 | hypothetical protein | - |
| PS037_RS23135 (4956) | 4956..5275 | + | 320 | Protein_5 | transposase | - |
| PS037_RS23140 (5767) | 5767..6651 | - | 885 | WP_273821945.1 | AraC family transcriptional regulator | - |
| PS037_RS23145 (7312) | 7312..7546 | + | 235 | Protein_7 | IS3 family transposase ISEc36 | Transposase |
| PS037_RS23150 (7633) | 7633..7989 | - | 357 | WP_273821946.1 | YcgJ family protein | - |
| PS037_RS23155 (8310) | 8310..9729 | - | 1420 | Protein_9 | IS66 family transposase | - |
| PS037_RS23160 (9689) | 9689..10054 | - | 366 | WP_273821947.1 | IS66 family transposase ISCro1 | Transposase |
| PS037_RS23165 (10054) | 10054..10332 | - | 279 | Protein_11 | IS66 family insertion sequence element accessory protein TnpB | - |
| PS037_RS23170 (10417) | 10417..11094 | + | 678 | WP_073514807.1 | IS66 family transposase ISSfl3 | Transposase |
| PS037_RS23175 (11091) | 11091..11438 | + | 348 | WP_000631709.1 | IS66 family transposase ISSfl3 | Transposase |
| PS037_RS23180 (11458) | 11458..13059 | + | 1602 | WP_273821255.1 | IS66 family transposase ISSfl3 | Transposase |
| PS037_RS23185 (13063) | 13063..13365 | - | 303 | WP_273821948.1 | hypothetical protein | - |
| PS037_RS23190 (13523) | 13523..13813 | - | 291 | WP_021570624.1 | hypothetical protein | - |
| PS037_RS23195 (13940) | 13940..14170 | - | 231 | Protein_17 | hypothetical protein | - |
| PS037_RS23200 (14247) | 14247..14486 | - | 240 | Protein_18 | IS66 family transposase ISEc49 | Transposase |
| PS037_RS23205 (16093) | 16093..16485 | - | 393 | WP_069917626.1 | hypothetical protein | VF |
| PS037_RS23210 (16496) | 16496..17101 | - | 606 | WP_069917625.1 | DUF3540 domain-containing protein | - |
| PS037_RS23215 (17113) | 17113..18183 | - | 1071 | WP_069917624.1 | pentapeptide repeat-containing protein | - |
| PS037_RS23220 (18180) | 18180..20720 | - | 2541 | WP_089552802.1 | DUF2169 domain-containing protein | - |
| PS037_RS23225 (21522) | 21522..23756 | - | 2235 | WP_115443101.1 | Actin cross-linking toxin VgrG1 | VF |
| PS037_RS23230 (23948) | 23948..25360 | - | 1413 | WP_069917621.1 | protein kinase | - |
| PS037_RS23235 (25385) | 25385..27997 | - | 2613 | WP_069917620.1 | Protein ClpV1 | VF |
| PS037_RS23240 (28059) | 28059..29090 | - | 1032 | WP_069917619.1 | hypothetical protein | VF |
| PS037_RS23245 (29087) | 29087..30958 | - | 1872 | WP_069917618.1 | hypothetical protein | VF |
| PS037_RS23250 (30961) | 30961..31524 | - | 564 | WP_069917617.1 | hypothetical protein | VF |
| PS037_RS23255 (31521) | 31521..32315 | - | 795 | WP_069917616.1 | hypothetical protein | VF |
| PS037_RS23260 (32325) | 32325..33308 | - | 984 | WP_069917615.1 | hypothetical protein | - |
| PS037_RS23265 (33330) | 33330..34124 | - | 795 | WP_069917614.1 | Protein phosphatase PrpC | VF |
| PS037_RS23270 (34124) | 34124..35851 | - | 1728 | WP_069917613.1 | hypothetical protein | VF |
| PS037_RS23275 (36115) | 36115..36600 | - | 486 | WP_069917612.1 | Protein hcp1 | VF |
| PS037_RS23280 (36789) | 36789..37211 | - | 423 | WP_069917611.1 | T6SS amidase immunity protein Tai4 family protein | - |
| PS037_RS23285 (37208) | 37208..37714 | - | 507 | WP_069917610.1 | type VI secretion system amidase effector protein Tae4 | - |
| PS037_RS23290 (37863) | 37863..39362 | - | 1500 | WP_069917609.1 | hypothetical protein | VF |
| PS037_RS23295 (39366) | 39366..39890 | - | 525 | WP_069917608.1 | hypothetical protein | VF |
| PS037_RS23300 (39966) | 39966..40976 | - | 1011 | WP_069917607.1 | hypothetical protein | VF |
| PS037_RS23305 (40991) | 40991..41699 | - | 709 | Protein_39 | type VI secretion system-associated protein TagF | - |
| PS037_RS23310 (41716) | 41716..45327 | - | 3612 | WP_069917606.1 | hypothetical protein | VF |
| PS037_RS23315 (45330) | 45330..46556 | - | 1227 | WP_170816411.1 | Motility protein B | VF |
| PS037_RS23320 (46574) | 46574..47917 | - | 1344 | WP_069917604.1 | hypothetical protein | VF |
| PS037_RS23325 (47943) | 47943..48449 | - | 507 | WP_069917603.1 | hypothetical protein | VF |
| PS037_RS23330 (48474) | 48474..48968 | - | 495 | WP_262253771.1 | SH3 domain-containing protein | - |
| PS037_RS23340 (51489) | 51489..51827 | + | 339 | WP_069917657.1 | transposase | - |
| PS037_RS23345 (51827) | 51827..53014 | + | 1188 | WP_089552989.1 | IS91 family transposase ISEc37 | Transposase |
| PS037_RS23350 (53282) | 53282..53560 | - | 279 | WP_244427497.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PS037_RS23355 (53560) | 53560..53829 | - | 270 | WP_069917659.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PS037_RS23360 (54751) | 54751..55608 | - | 858 | WP_021559031.1 | incFII family plasmid replication initiator RepA | - |
| PS037_RS23365 (55601) | 55601..55675 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| PS037_RS23370 (55921) | 55921..56169 | - | 249 | WP_273821949.1 | replication regulatory protein RepA | - |
| PS037_RS23375 (56794) | 56794..56994 | - | 201 | WP_273821950.1 | hypothetical protein | - |
| PS037_RS23380 (57134) | 57134..57694 | - | 561 | WP_072661996.1 | fertility inhibition protein FinO | - |
| PS037_RS23385 (57749) | 57749..58495 | - | 747 | WP_273821951.1 | conjugal transfer pilus acetylase TraX | - |
| PS037_RS23390 (58515) | 58515..63785 | - | 5271 | WP_273821959.1 | Multifunctional conjugation protein TraI | Relaxase |
| PS037_RS23395 (63867) | 63867..64094 | + | 228 | WP_039520356.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PS037_RS23400 (64094) | 64094..64492 | + | 399 | WP_273821952.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PS037_RS23405 (64501) | 64501..65130 | - | 630 | Protein_59 | type IV secretion system DNA-binding domain-containing protein | - |
| PS037_RS23410 (65195) | 65195..65977 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| PS037_RS23415 (65974) | 65974..66996 | - | 1023 | WP_273821257.1 | IS21 family transposase IS100kyp | Transposase |
| PS037_RS23420 (67053) | 67053..67304 | + | 252 | WP_273821953.1 | hypothetical protein | - |
| PS037_RS23425 (67820) | 67820..68269 | - | 450 | WP_273821954.1 | CaiF/GrlA family transcriptional regulator | - |
| PS037_RS23430 (68585) | 68585..69358 | - | 774 | WP_273821955.1 | hypothetical protein | VF |
| PS037_RS23435 (69375) | 69375..70139 | - | 765 | WP_273821956.1 | hypothetical protein | VF |
| PS037_RS23440 (70170) | 70170..70967 | - | 798 | WP_273821957.1 | hypothetical protein | VF |
| PS037_RS23445 (71189) | 71189..71962 | - | 774 | WP_273821958.1 | K88 fimbrial protein AD | VF |
| PS037_RS23450 (72200) | 72200..72691 | - | 492 | WP_273821906.1 | hypothetical protein | VF |
| PS037_RS23455 (72726) | 72726..73517 | - | 792 | WP_273821907.1 | Chaperone protein FaeE | VF |
| PS037_RS23460 (73510) | 73510..75910 | - | 2401 | Protein_70 | Outer membrane usher protein YraJ | VF |
| PS037_RS23465 (75964) | 75964..76506 | - | 543 | WP_273821908.1 | hypothetical protein | VF |
| PS037_RS23470 (76514) | 76514..76813 | - | 300 | WP_273821909.1 | Major pilu subunit operon regulatory protein PapB | VF |
| PS037_RS23475 (77691) | 77691..78666 | - | 976 | Protein_73 | IS110 family transposase | - |
| PS037_RS23480 (78758) | 78758..78859 | + | 102 | WP_273821910.1 | FaeA/PapI family transcriptional regulator | - |
| PS037_RS23485 (78945) | 78945..80096 | - | 1152 | WP_273821911.1 | Alcohol dehydrogenase 2 | VF |
| PS037_RS23490 (80182) | 80182..80388 | - | 207 | WP_273821912.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| PS037_RS23495 (80439) | 80439..80833 | - | 395 | Protein_77 | integrase core domain-containing protein | - |
| PS037_RS23500 (80836) | 80836..81038 | + | 203 | Protein_78 | IS21 family transposase | - |
| PS037_RS23505 (82444) | 82444..82681 | - | 238 | Protein_79 | IS66 family insertion sequence element accessory protein TnpB | - |
| PS037_RS23510 (82760) | 82760..83259 | - | 500 | Protein_80 | IS21 family transposase IS21 | Transposase |
| PS037_RS23515 (83259) | 83259..84174 | - | 916 | Protein_81 | IS21 family transposase IS21 | Transposase |
| PS037_RS23520 (84271) | 84271..84594 | + | 324 | Protein_82 | DUF4113 domain-containing protein | - |
| PS037_RS23525 (84596) | 84596..85012 | - | 417 | WP_001278817.1 | plasmid partitioning/stability family protein | - |
| PS037_RS23530 (85005) | 85005..85985 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| PS037_RS23535 (86399) | 86399..86704 | - | 306 | WP_273821913.1 | molecular chaperone GroEL | - |
| PS037_RS23540 (86791) | 86791..87435 | - | 645 | WP_273821914.1 | ParA family protein | - |
| PS037_RS23545 (87615) | 87615..88411 | - | 797 | Protein_87 | IS91 family transposase ISAzo26 | Transposase |
| PS037_RS23550 (88412) | 88412..88715 | - | 304 | Protein_88 | type II toxin-antitoxin system toxin CcdB | - |
| PS037_RS23555 (88717) | 88717..88935 | - | 219 | WP_000813638.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| PS037_RS23560 (89406) | 89406..89891 | - | 486 | WP_273821915.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PS037_RS23565 (89879) | 89879..90163 | - | 285 | WP_273821916.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PS037_RS23570 (90915) | 90915..92126 | + | 1212 | WP_273821917.1 | Adhesin YadA | VF |
| PS037_RS23575 (92253) | 92253..93452 | - | 1200 | WP_273821918.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| PS037_RS23580 (93916) | 93916..94118 | - | 203 | Protein_94 | hypothetical protein | - |
| PS037_RS23585 (94491) | 94491..95645 | + | 1155 | Protein_95 | IS200-IS605 family transposase IS609 | Transposase |
| PS037_RS23590 (96020) | 96020..96745 | - | 726 | Protein_96 | IS3 family transposase ISKpn38 | Transposase |
| PS037_RS23595 (97150) | 97150..97923 | + | 774 | WP_273821919.1 | hypothetical protein | - |
| PS037_RS23600 (98235) | 98235..100259 | + | 2025 | WP_273821920.1 | AIDA-I autotransporter | VF |
| PS037_RS23605 (100363) | 100363..101382 | + | 1020 | WP_273821921.1 | IS110 family transposase ISEc66 | Transposase |
| PS037_RS23610 (102236) | 102236..102523 | + | 288 | WP_273821922.1 | hypothetical protein | - |
| PS037_RS23615 (103054) | 103054..103239 | + | 186 | Protein_101 | IS3 family transposase IS1351 | Transposase |
| PS037_RS23620 (104174) | 104174..106027 | - | 1854 | WP_273821923.1 | KUP/HAK/KT family potassium transporter | - |
| PS037_RS23625 (106232) | 106232..107662 | - | 1431 | WP_273821924.1 | Glutamate/gamma-aminobutyrate antiporter | VF |
| PS037_RS23630 (107750) | 107750..109462 | - | 1713 | WP_273821925.1 | pyridoxal-dependent decarboxylase | - |
| PS037_RS23635 (110823) | 110823..111578 | + | 756 | WP_273821926.1 | hypothetical protein | - |
| PS037_RS23640 (111971) | 111971..112892 | + | 922 | Protein_106 | IS21 family transposase IS21 | Transposase |
| PS037_RS23645 (112892) | 112892..113688 | + | 797 | Protein_107 | IS21 family transposase IS21 | Transposase |
| PS037_RS23650 (113749) | 113749..114696 | - | 948 | Protein_108 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PS037_RS23655 (114696) | 114696..115133 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PS037_RS23660 (115130) | 115130..115279 | - | 150 | WP_273821927.1 | hypothetical protein | - |
| PS037_RS23665 (115693) | 115693..116597 | + | 905 | Protein_111 | DUF1281 domain-containing protein | - |
| PS037_RS23670 (116594) | 116594..116905 | + | 312 | WP_273821928.1 | hypothetical protein | - |
| PS037_RS23675 (116981) | 116981..117664 | + | 684 | WP_273821929.1 | DNA methylase | - |
| PS037_RS23680 (117665) | 117665..117886 | + | 222 | WP_273821930.1 | hypothetical protein | - |
| PS037_RS23685 (117780) | 117780..118333 | + | 554 | Protein_115 | DUF1380 family protein | - |
| PS037_RS23690 (118378) | 118378..119148 | + | 771 | Protein_116 | hypothetical protein | - |
| PS037_RS23695 (119190) | 119190..120380 | - | 1191 | WP_273821931.1 | IS4 family transposase ISEc60 | Transposase |
| PS037_RS23700 (120870) | 120870..121295 | + | 426 | Protein_118 | antirestriction protein | - |
| PS037_RS23705 (121334) | 121334..121759 | + | 426 | WP_273821932.1 | hypothetical protein | - |
| PS037_RS23710 (121756) | 121756..121947 | + | 192 | WP_273821933.1 | hypothetical protein | - |
| PS037_RS23715 (122073) | 122073..122270 | + | 198 | WP_273821934.1 | hypothetical protein | - |
| PS037_RS23720 (122843) | 122843..123073 | + | 231 | WP_105288677.1 | hypothetical protein | - |
| PS037_RS23725 (123124) | 123124..124485 | + | 1362 | WP_273821935.1 | DUF3560 domain-containing protein | - |
| PS037_RS23730 (124532) | 124532..125095 | + | 564 | WP_097424105.1 | class I SAM-dependent methyltransferase | - |
| PS037_RS23735 (125211) | 125211..125633 | - | 423 | Protein_125 | hypothetical protein | - |
| PS037_RS23740 (126503) | 126503..128404 | + | 1902 | WP_273821936.1 | group II intron reverse transcriptase/maturase | - |
| PS037_RS23745 (128554) | 128554..129050 | + | 497 | Protein_127 | single-stranded DNA-binding protein | - |
| PS037_RS23750 (129107) | 129107..129340 | + | 234 | WP_273821937.1 | DUF905 family protein | - |
| PS037_RS23755 (129406) | 129406..130062 | + | 657 | Protein_129 | ParB/RepB/Spo0J family partition protein | - |
| PS037_RS23760 (130171) | 130171..130604 | + | 434 | Protein_130 | conjugation system SOS inhibitor PsiB | - |
| PS037_RS23765 (130601) | 130601..131247 | + | 647 | Protein_131 | plasmid SOS inhibition protein A | - |
| PS037_RS23770 (131247) | 131247..131755 | + | 509 | Protein_132 | hypothetical protein | - |
| - (131774) | 131774..131937 | + | 164 | NuclAT_0 | - | - |
| - (131774) | 131774..131937 | + | 164 | NuclAT_0 | - | - |
| - (131774) | 131774..131937 | + | 164 | NuclAT_0 | - | - |
| - (131774) | 131774..131937 | + | 164 | NuclAT_0 | - | - |
| PS037_RS23775 (131944) | 131944..132093 | + | 150 | Protein_133 | plasmid maintenance protein Mok | - |
| PS037_RS23780 (132035) | 132035..132160 | + | 126 | WP_000909453.1 | type I toxin-antitoxin system Hok family toxin | - |
| PS037_RS23785 (132386) | 132386..132578 | - | 193 | Protein_135 | hypothetical protein | - |
| PS037_RS23790 (132532) | 132532..132633 | - | 102 | Protein_136 | hypothetical protein | - |
| PS037_RS23795 (132849) | 132849..133115 | + | 267 | WP_273821938.1 | hypothetical protein | - |
| PS037_RS23800 (133255) | 133255..134077 | + | 823 | Protein_138 | DUF932 domain-containing protein | - |
| PS037_RS23805 (134374) | 134374..134944 | - | 571 | Protein_139 | hypothetical protein | VF |
| PS037_RS23810 (135298) | 135298..135681 | + | 384 | WP_273821939.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS037_RS23815 (135867) | 135867..136555 | + | 689 | Protein_141 | conjugal transfer transcriptional regulator TraJ | - |
| PS037_RS23820 (136654) | 136654..136974 | + | 321 | WP_273821940.1 | TraY domain-containing protein | - |
| PS037_RS23825 (137074) | 137074..137439 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| PS037_RS23830 (137454) | 137454..137765 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| PS037_RS23835 (137787) | 137787..138353 | + | 567 | WP_273821941.1 | type IV conjugative transfer system protein TraE | - |
| PS037_RS23840 (138340) | 138340..139067 | + | 728 | Protein_146 | type-F conjugative transfer system secretin TraK | - |
| PS037_RS23845 (139201) | 139201..140673 | + | 1473 | Protein_147 | type IV conjugative transfer system coupling protein TraD | - |
| PS037_RS23850 (140759) | 140759..141781 | + | 1023 | WP_273821257.1 | IS21 family transposase IS100kyp | Transposase |
| PS037_RS23855 (141778) | 141778..142560 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|