MGE detailed information
MGE type: Genomic_island MGE length: 18150 bp
Accession: NZ_CP117554 Location: 1824237..1842386 Organism: Erwinia amylovora strain 99east-3-1 Replicon: chromosome
Accession: NZ_CP117554 Location: 1824237..1842386 Organism: Erwinia amylovora strain 99east-3-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTC76_RS08500 (PTC76_08500) | 1819700..1820974 | - | 1275 | WP_004157525.1 | Glu/Leu/Phe/Val dehydrogenase | - |
| PTC76_RS08505 (PTC76_08505) | 1821536..1822735 | + | 1200 | WP_004157528.1 | trans-2-enoyl-CoA reductase family protein | - |
| PTC76_RS08510 (PTC76_08510) | 1823301..1824053 | + | 753 | WP_004157530.1 | hypothetical protein | - |
| PTC76_RS08515 (PTC76_08515) | 1824419..1826809 | + | 2391 | WP_004157532.1 | TonB-dependent receptor | - |
| PTC76_RS08520 (PTC76_08520) | 1826865..1827152 | - | 288 | WP_004157533.1 | SelT/SelW/SelH family protein | - |
| PTC76_RS08525 (PTC76_08525) | 1827212..1827877 | - | 666 | WP_004157534.1 | DUF1345 domain-containing protein | - |
| PTC76_RS08530 (PTC76_08530) | 1827885..1828517 | - | 633 | WP_004157535.1 | hypothetical protein | VF |
| PTC76_RS08535 (PTC76_08535) | 1828623..1829285 | + | 663 | WP_004157536.1 | DUF3313 domain-containing protein | - |
| PTC76_RS08540 (PTC76_08540) | 1829365..1830753 | - | 1389 | WP_004157537.1 | phosphatidylinositol-specific phospholipase C | - |
| PTC76_RS08545 (PTC76_08545) | 1831214..1834678 | + | 3465 | WP_004157538.1 | hypothetical protein | - |
| PTC76_RS08550 (PTC76_08550) | 1834950..1835159 | + | 210 | WP_004157539.1 | glycine zipper 2TM domain-containing protein | - |
| PTC76_RS08555 (PTC76_08555) | 1835272..1835748 | + | 477 | WP_004157540.1 | GNAT family N-acetyltransferase | - |
| PTC76_RS08560 (PTC76_08560) | 1835872..1836621 | + | 750 | WP_004157541.1 | 5'-nucleotidase, lipoprotein e(P4) family | - |
| PTC76_RS08565 (PTC76_08565) | 1836708..1838180 | - | 1473 | WP_004157542.1 | hypothetical protein | VF |
| PTC76_RS08570 (PTC76_08570) | 1838973..1839194 | + | 222 | WP_004157544.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PTC76_RS08575 (PTC76_08575) | 1839191..1839562 | + | 372 | WP_004157545.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PTC76_RS08580 (PTC76_08580) | 1840446..1842386 | + | 1941 | WP_004157559.1 | hypothetical protein | VF |
| PTC76_RS08585 (PTC76_08585) | 1842512..1843147 | + | 636 | WP_004157562.1 | carbonic anhydrase | - |
| PTC76_RS08590 (PTC76_08590) | 1843232..1843681 | - | 450 | WP_004157563.1 | DUF4385 domain-containing protein | - |
| PTC76_RS08595 (PTC76_08595) | 1844112..1845767 | + | 1656 | WP_004162292.1 | malate dehydrogenase (quinone) | - |
| PTC76_RS08600 (PTC76_08600) | 1845877..1846311 | - | 435 | WP_004157569.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24688 | NC_013971 | 1858737..1876886 | 0 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA294489 | NZ_NQJO01000001 | 2039450..2055220 | 0.007 |