MGE detailed information
MGE type: Genomic_island MGE length: 36250 bp
Accession: NZ_CP117404 Location: 4300626..4336875 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 Replicon: chromosome
Accession: NZ_CP117404 Location: 4300626..4336875 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ07_RS20890 (4295848) | 4295848..4297551 | + | 1704 | WP_000068899.1 | protein-disulfide reductase DsbD | - |
| PQQ07_RS20895 (4297588) | 4297588..4298163 | + | 576 | WP_001188509.1 | transcriptional regulator | - |
| PQQ07_RS20905 (4298531) | 4298531..4299721 | + | 1191 | WP_001218743.1 | tyrosine-type recombinase/integrase | - |
| PQQ07_RS20910 (4300155) | 4300155..4300400 | + | 246 | Protein_4085 | tetratricopeptide repeat protein | - |
| PQQ07_RS20915 (4300374) | 4300374..4300598 | - | 225 | Protein_4086 | LysR family transcriptional regulator | - |
| PQQ07_RS20920 (4300626) | 4300626..4301840 | - | 1215 | WP_012728216.1 | Bicyclomycin resistance protein | ARG |
| PQQ07_RS20925 (4302057) | 4302057..4302941 | - | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| PQQ07_RS20930 (4302972) | 4302972..4304465 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| PQQ07_RS20935 (4304676) | 4304676..4304900 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| PQQ07_RS20940 (4304897) | 4304897..4305634 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PQQ07_RS20945 (4306120) | 4306120..4306260 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| PQQ07_RS20950 (4306266) | 4306266..4306970 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQQ07_RS20955 (4306961) | 4306961..4307557 | + | 597 | WP_274896169.1 | hypothetical protein | - |
| PQQ07_RS20960 (4307657) | 4307657..4308226 | + | 570 | WP_000517677.1 | hypothetical protein | - |
| PQQ07_RS20965 (4308643) | 4308643..4309077 | - | 435 | WP_000038247.1 | H-NS family nucleoid-associated regulatory protein | - |
| PQQ07_RS20970 (4309491) | 4309491..4309664 | - | 174 | WP_153274857.1 | hypothetical protein | - |
| PQQ07_RS20975 (4309970) | 4309970..4310314 | + | 345 | WP_274896170.1 | ProQ/FINO family protein | - |
| PQQ07_RS20980 (4310409) | 4310409..4310597 | + | 189 | WP_274896171.1 | hypothetical protein | - |
| PQQ07_RS20985 (4311146) | 4311146..4311382 | - | 237 | WP_000958152.1 | AlpA family transcriptional regulator | - |
| PQQ07_RS20990 (4311451) | 4311451..4312026 | - | 576 | WP_000991584.1 | hypothetical protein | - |
| PQQ07_RS20995 (4312274) | 4312274..4312840 | - | 567 | WP_001126820.1 | inovirus-type Gp2 protein | - |
| PQQ07_RS21000 (4314401) | 4314401..4316005 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| PQQ07_RS21005 (4316438) | 4316438..4316644 | + | 207 | WP_024187081.1 | hypothetical protein | - |
| PQQ07_RS21010 (4316719) | 4316719..4316967 | + | 249 | WP_254909161.1 | hypothetical protein | - |
| PQQ07_RS21015 (4317188) | 4317188..4317919 | - | 732 | WP_001075484.1 | inovirus Gp2 family protein | - |
| PQQ07_RS21020 (4319438) | 4319438..4320568 | - | 1131 | WP_000147746.1 | hypothetical protein | - |
| PQQ07_RS21025 (4320753) | 4320753..4321637 | + | 885 | WP_000010398.1 | 50S ribosome-binding GTPase | - |
| PQQ07_RS21030 (4321755) | 4321755..4322432 | + | 678 | WP_001097369.1 | hypothetical protein | - |
| PQQ07_RS21035 (4322438) | 4322438..4322671 | + | 234 | WP_001278282.1 | DUF905 family protein | - |
| PQQ07_RS21040 (4322761) | 4322761..4323579 | + | 819 | WP_001175145.1 | DUF932 domain-containing protein | - |
| PQQ07_RS21045 (4323656) | 4323656..4324141 | + | 486 | WP_000213705.1 | antirestriction protein | - |
| PQQ07_RS21050 (4324157) | 4324157..4324633 | + | 477 | WP_001186715.1 | RadC family protein | - |
| PQQ07_RS21055 (4324702) | 4324702..4324923 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| PQQ07_RS21060 (4324942) | 4324942..4325586 | + | 645 | WP_000086770.1 | hypothetical protein | - |
| PQQ07_RS21065 (4325636) | 4325636..4326004 | + | 369 | WP_001285113.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PQQ07_RS21070 (4326094) | 4326094..4326471 | + | 378 | WP_000854719.1 | TA system toxin CbtA family protein | Toxin Detail |
| PQQ07_RS21075 (4326468) | 4326468..4326956 | + | 489 | WP_000761679.1 | DUF5983 family protein | - |
| PQQ07_RS21080 (4326974) | 4326974..4327171 | + | 198 | WP_000839266.1 | DUF957 domain-containing protein | - |
| PQQ07_RS21085 (4327256) | 4327256..4328101 | + | 846 | WP_001440175.1 | DUF4942 domain-containing protein | - |
| PQQ07_RS21090 (4328170) | 4328170..4328565 | + | 396 | WP_000208386.1 | DUF6088 family protein | Antitoxin Detail |
| PQQ07_RS21095 (4328558) | 4328558..4329505 | + | 948 | WP_001440173.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| PQQ07_RS21100 (4329791) | 4329791..4329868 | - | 78 | Protein_4123 | helix-turn-helix domain-containing protein | - |
| PQQ07_RS21105 (4329959) | 4329959..4330291 | - | 333 | WP_001165471.1 | MerR family transcriptional regulator | - |
| PQQ07_RS21110 (4330363) | 4330363..4330740 | + | 378 | WP_000916345.1 | EthD family reductase | - |
| PQQ07_RS21115 (4331773) | 4331773..4331847 | + | 75 | Protein_4126 | porin family protein | - |
| PQQ07_RS21120 (4331950) | 4331950..4332702 | + | 753 | WP_000842434.1 | non-specific acid phosphatase | - |
| PQQ07_RS21125 (4332950) | 4332950..4333441 | - | 492 | WP_000626099.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQQ07_RS21130 (4333438) | 4333438..4333731 | - | 294 | WP_001110452.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQQ07_RS21135 (4334048) | 4334048..4334269 | + | 222 | WP_001576552.1 | hypothetical protein | - |
| PQQ07_RS21140 (4334534) | 4334534..4335409 | + | 876 | WP_000921674.1 | HTH-type transcriptional regulator GadX | VF |
| PQQ07_RS21145 (4335406) | 4335406..4335693 | + | 288 | WP_001269916.1 | hypothetical protein | VF |
| PQQ07_RS21150 (4335716) | 4335716..4335931 | + | 216 | WP_001595136.1 | hypothetical protein | - |
| PQQ07_RS21155 (4335939) | 4335939..4336208 | + | 270 | WP_010989096.1 | hypothetical protein | - |
| PQQ07_RS21160 (4336417) | 4336417..4336875 | - | 459 | WP_000502119.1 | IS200-IS605 family transposase IS200F | Transposase |
| PQQ07_RS21165 (4337214) | 4337214..4338119 | - | 906 | WP_001268200.1 | YjiK family protein | - |
| PQQ07_RS21170 (4338423) | 4338423..4339823 | + | 1401 | WP_000773784.1 | DUF1996 domain-containing protein | - |
| PQQ07_RS21175 (4339907) | 4339907..4340560 | - | 654 | WP_001112218.1 | molecular chaperone | - |
| PQQ07_RS21180 (4340576) | 4340576..4341349 | - | 774 | WP_000544929.1 | dimethyl sulfoxide reductase anchor subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|