MGE detailed information
MGE type: Genomic_island MGE length: 13973 bp
Accession: NZ_CP117404 Location: 3656197..3670169 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 Replicon: chromosome
Accession: NZ_CP117404 Location: 3656197..3670169 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ07_RS17930 () | 3651767..3654211 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PQQ07_RS17935 () | 3654320..3655088 | + | 769 | Protein_3505 | amidohydrolase | - |
| PQQ07_RS17940 () | 3655459..3655866 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQQ07_RS17945 () | 3656197..3656916 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| PQQ07_RS17950 () | 3656920..3657135 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PQQ07_RS17955 () | 3657252..3658199 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQQ07_RS17960 () | 3658691..3658931 | - | 241 | Protein_3510 | PerC family transcriptional regulator | - |
| PQQ07_RS17965 () | 3659014..3659835 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| PQQ07_RS17970 () | 3660241..3660711 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| PQQ07_RS17975 () | 3660733..3663243 | - | 2511 | WP_000669635.1 | F1 capsule-anchoring protein | VF |
| PQQ07_RS17980 () | 3663267..3664004 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| PQQ07_RS17985 () | 3664088..3664600 | - | 513 | WP_077905298.1 | pilus assembly protein | - |
| PQQ07_RS17990 () | 3665350..3666054 | - | 705 | Protein_3516 | integrase core domain-containing protein | - |
| PQQ07_RS17995 () | 3666107..3666355 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PQQ07_RS18000 () | 3666457..3666765 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| PQQ07_RS18005 () | 3666848..3666964 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3667049..3667471 | - | 423 | - | - | Antitoxin Detail |
| PQQ07_RS18010 () | 3667206..3667481 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ07_RS18015 () | 3667534..3667971 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PQQ07_RS18020 () | 3668534..3668980 | - | 447 | WP_000935097.1 | protein SciX | - |
| PQQ07_RS18025 () | 3668974..3669842 | - | 869 | Protein_3523 | polymorphic toxin type 47 domain-containing protein | - |
| PQQ07_RS18030 () | 3669906..3670169 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| PQQ07_RS18035 () | 3670163..3674257 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| PQQ07_RS18040 () | 3674276..3674722 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |