MGE detailed information
MGE type: Genomic_island MGE length: 29342 bp
Accession: NZ_CP117384 Location: 3665186..3694527 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM013 Replicon: chromosome
Accession: NZ_CP117384 Location: 3665186..3694527 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM013 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP89_RS18100 () | 3660757..3663201 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PQP89_RS18105 () | 3663310..3664077 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQP89_RS18110 () | 3664448..3664855 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQP89_RS18115 () | 3665186..3665905 | + | 720 | WP_000787601.1 | Outer membrane protein PagN | VF |
| PQP89_RS18120 () | 3665909..3666097 | - | 189 | WP_079798499.1 | hypothetical protein | - |
| PQP89_RS18125 () | 3666133..3666266 | + | 134 | Protein_3545 | transposase | - |
| PQP89_RS18130 () | 3666868..3667485 | - | 618 | WP_000241748.1 | protein TioA | - |
| PQP89_RS18135 () | 3667625..3668080 | - | 456 | WP_000141548.1 | Lrp/AsnC family transcriptional regulator | - |
| PQP89_RS18140 () | 3668213..3669292 | - | 1080 | WP_000791814.1 | fimbrial protein TcfD | - |
| PQP89_RS18145 () | 3669314..3672001 | - | 2688 | WP_001651570.1 | hypothetical protein | VF |
| PQP89_RS18150 () | 3672110..3672628 | - | 519 | WP_001056553.1 | CFA/I fimbrial subunit B | VF |
| PQP89_RS18155 () | 3672736..3673446 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| PQP89_RS18160 () | 3674482..3675039 | + | 558 | Protein_3552 | IS21 family transposase ISEc62 | Transposase |
| PQP89_RS18165 () | 3675079..3675265 | - | 187 | Protein_3553 | transposase | - |
| PQP89_RS18170 () | 3675346..3675465 | - | 120 | Protein_3554 | hypothetical protein | - |
| PQP89_RS18175 () | 3675585..3676532 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQP89_RS18180 () | 3677026..3677266 | - | 241 | Protein_3556 | PerC family transcriptional regulator | - |
| PQP89_RS18185 () | 3677349..3678170 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| PQP89_RS18190 () | 3678576..3679046 | - | 471 | WP_000266947.1 | AfaD family invasin | - |
| PQP89_RS18195 () | 3679068..3681578 | - | 2511 | WP_000669316.1 | F1 capsule-anchoring protein | VF |
| PQP89_RS18200 () | 3681602..3682339 | - | 738 | WP_001750707.1 | Chaperone protein caf1M | VF |
| PQP89_RS18205 () | 3682416..3682913 | - | 498 | WP_001750706.1 | Saf-pilin pilus formation protein SafA | - |
| PQP89_RS18210 () | 3683674..3684378 | - | 705 | Protein_3562 | integrase core domain-containing protein | - |
| PQP89_RS18215 () | 3684431..3684679 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PQP89_RS18220 () | 3684811..3685089 | - | 279 | WP_079798501.1 | hypothetical protein | - |
| PQP89_RS18225 () | 3685172..3685288 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| PQP89_RS18230 () | 3685530..3685787 | + | 258 | WP_079798500.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP89_RS18235 () | 3685878..3686255 | - | 378 | WP_000739707.1 | Imm8 family immunity protein | - |
| PQP89_RS18240 () | 3686988..3687353 | - | 366 | WP_001231281.1 | hypothetical protein | - |
| PQP89_RS18245 () | 3687319..3688665 | - | 1347 | Protein_3569 | hypothetical protein | VF |
| PQP89_RS18250 () | 3688727..3688984 | + | 258 | WP_000994229.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP89_RS18255 () | 3689048..3689386 | - | 339 | WP_000382983.1 | hypothetical protein | - |
| PQP89_RS18260 () | 3689757..3690797 | - | 1041 | Protein_3572 | hypothetical protein | VF |
| - | 3690766..3691034 | - | 269 | - | - | Antitoxin Detail |
| PQP89_RS18265 () | 3690859..3691116 | + | 258 | WP_000994229.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP89_RS18270 () | 3691180..3691518 | - | 339 | WP_000382983.1 | hypothetical protein | - |
| PQP89_RS18275 () | 3691889..3693646 | - | 1758 | Protein_3575 | RHS repeat domain-containing protein | - |
| PQP89_RS18280 () | 3693851..3694084 | + | 234 | WP_000035941.1 | hypothetical protein | - |
| PQP89_RS18285 () | 3694156..3694503 | - | 348 | WP_000887296.1 | hypothetical protein | - |
| PQP89_RS18290 () | 3694538..3699217 | - | 4680 | WP_162803795.1 | RHS repeat-associated core domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|