NZ_CP117370879676..891001

MGE detailed information

MGE type: Genomic_island        MGE length: 11326 bp
Accession: NZ_CP117370        Location: 879676..891001         Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PQP97_RS04265 (875122) 875122..876220 + 1099 WP_010989230.1 peptide chain release factor 2 -
PQP97_RS04270 (876230) 876230..877747 + 1518 WP_000003339.1 lysine--tRNA ligase -
PQP97_RS04275 (877823) 877823..878368 - 546 WP_000133994.1 isopentenyl-diphosphate Delta-isomerase -
PQP97_RS04280 (878633) 878633..879391 + 759 WP_000244329.1 amidase activator ActS -
PQP97_RS04290 (879676) 879676..880482 - 807 WP_010989071.1 DUF1460 domain-containing protein -
PQP97_RS04295 (880757) 880757..881008 - 252 WP_001540858.1 hypothetical protein -
PQP97_RS04300 (881185) 881185..881412 + 228 WP_000557549.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
PQP97_RS04305 (881412) 881412..881810 + 399 WP_000911336.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
PQP97_RS04310 (882616) 882616..883152 + 537 WP_001038506.1 hypothetical protein VF
PQP97_RS04315 (883199) 883199..883831 + 633 WP_000835265.1 YfdX family protein -
PQP97_RS04320 (884550) 884550..885134 + 585 WP_001244638.1 hypothetical protein VF
PQP97_RS04325 (885254) 885254..887743 + 2490 WP_000705483.1 hypothetical protein VF
PQP97_RS04330 (887784) 887784..888527 + 744 WP_000798504.1 hypothetical protein VF
PQP97_RS04335 (888524) 888524..889600 + 1077 WP_000141329.1 outer membrane protein -
PQP97_RS04340 (889744) 889744..890256 + 513 WP_000336259.1 CaiF/GrlA family transcriptional regulator -
PQP97_RS04345 (890243) 890243..891001 + 759 WP_000134791.1 transcriptional regulator -
PQP97_RS04350 (891211) 891211..892065 - 855 WP_000503685.1 nickel/cobalt efflux protein RcnA -
PQP97_RS04355 (892187) 892187..892459 + 273 WP_000019953.1 Ni(II)/Co(II)-binding transcriptional repressor RcnR -
PQP97_RS04360 (892490) 892490..893719 - 1230 WP_000036825.1 amino acid permease -
PQP97_RS04365 (893861) 893861..894316 - 456 WP_001519547.1 multidrug/biocide efflux PACE transporter -
PQP97_RS04370 (894420) 894420..895283 + 864 WP_001270766.1 LysR family transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Genomic island TA439 NC_003197 3186004..3197296 0.004
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 Genomic island TA25956 NC_016810 3207430..3218010 0.002
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Genomic island TA26056 NC_016856 3205849..3216429 0.002
Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 Genomic island TA297244 UFRD01000002 4451871..4463194 0