MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_CP117370 Location: 313616..322267 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 Replicon: chromosome
Accession: NZ_CP117370 Location: 313616..322267 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP97_RS01405 (309421) | 309421..310524 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PQP97_RS01410 (310607) | 310607..310741 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| PQP97_RS01415 (310719) | 310719..311102 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PQP97_RS01420 (311524) | 311524..312633 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PQP97_RS01425 (312693) | 312693..313619 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PQP97_RS01430 (313616) | 313616..314893 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| PQP97_RS01435 (314890) | 314890..315657 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| PQP97_RS01440 (315659) | 315659..316372 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PQP97_RS01445 (316504) | 316504..316725 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQP97_RS01450 (316722) | 316722..317090 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PQP97_RS01455 (317349) | 317349..318665 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PQP97_RS01460 (318729) | 318729..319616 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PQP97_RS01465 (319613) | 319613..320458 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PQP97_RS01470 (320460) | 320460..321530 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| PQP97_RS01475 (321527) | 321527..322267 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| PQP97_RS01480 (322280) | 322280..322696 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| PQP97_RS01485 (322822) | 322822..324564 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| PQP97_RS01490 (324609) | 324609..325643 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PQP97_RS01495 (325640) | 325640..326611 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |