MGE detailed information
MGE type: Genomic_island MGE length: 13972 bp
Accession: NZ_CP117357 Location: 3701139..3715110 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM096 Replicon: chromosome
Accession: NZ_CP117357 Location: 3701139..3715110 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM096 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ15_RS18260 () | 3696710..3699154 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PQQ15_RS18265 () | 3699263..3700030 | + | 768 | WP_274881109.1 | amidohydrolase | - |
| PQQ15_RS18270 () | 3700401..3700808 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQQ15_RS18275 () | 3701139..3701858 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| PQQ15_RS18280 () | 3701862..3702077 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PQQ15_RS18285 () | 3702194..3703141 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQQ15_RS18290 () | 3703633..3703873 | - | 241 | Protein_3577 | PerC family transcriptional regulator | - |
| PQQ15_RS18295 () | 3703956..3704777 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| PQQ15_RS18300 () | 3705183..3705653 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| PQQ15_RS18305 () | 3705675..3708185 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| PQQ15_RS18310 () | 3708209..3708946 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| PQQ15_RS18315 () | 3709030..3709542 | - | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| PQQ15_RS18320 () | 3710292..3710996 | - | 705 | Protein_3583 | integrase core domain-containing protein | - |
| PQQ15_RS18325 () | 3711049..3711297 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PQQ15_RS18330 () | 3711399..3711707 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| PQQ15_RS18335 () | 3711790..3711906 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3711991..3712413 | - | 423 | - | - | Antitoxin Detail |
| PQQ15_RS18340 () | 3712148..3712423 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ15_RS18345 () | 3712476..3712913 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PQQ15_RS18350 () | 3713476..3713922 | - | 447 | WP_000935097.1 | protein SciX | - |
| PQQ15_RS18355 () | 3713916..3714263 | - | 348 | WP_274882531.1 | polymorphic toxin type 47 domain-containing protein | - |
| PQQ15_RS18360 () | 3714251..3714783 | - | 533 | Protein_3591 | hypothetical protein | VF |
| PQQ15_RS18365 () | 3714847..3715110 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| PQQ15_RS18370 () | 3715104..3719198 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| PQQ15_RS18375 () | 3719217..3719663 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |