MGE detailed information
MGE type: Genomic_island MGE length: 13972 bp
Accession: NZ_CP117338 Location: 3702278..3716249 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 Replicon: chromosome
Accession: NZ_CP117338 Location: 3702278..3716249 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP94_RS18380 () | 3697849..3700293 | + | 2445 | WP_274895715.1 | acyl-CoA dehydrogenase FadE | - |
| PQP94_RS18385 () | 3700402..3701169 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQP94_RS18390 () | 3701540..3701947 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQP94_RS18395 () | 3702278..3702997 | + | 720 | WP_274895716.1 | Outer membrane protein PagN | VF |
| PQP94_RS18400 () | 3703001..3703216 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PQP94_RS18405 () | 3703333..3704280 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQP94_RS18410 () | 3704772..3705012 | - | 241 | Protein_3601 | PerC family transcriptional regulator | - |
| PQP94_RS18415 () | 3705095..3705916 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| PQP94_RS18420 () | 3706322..3706792 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| PQP94_RS18425 () | 3706814..3709324 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| PQP94_RS18430 () | 3709348..3710085 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| PQP94_RS18435 () | 3710169..3710681 | - | 513 | WP_077946652.1 | pilus assembly protein | - |
| PQP94_RS18440 () | 3711431..3712135 | - | 705 | Protein_3607 | integrase core domain-containing protein | - |
| PQP94_RS18445 () | 3712188..3712436 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PQP94_RS18450 () | 3712538..3712846 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| PQP94_RS18455 () | 3712929..3713045 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3713130..3713552 | - | 423 | - | - | Antitoxin Detail |
| PQP94_RS18460 () | 3713287..3713562 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP94_RS18465 () | 3713615..3714051 | - | 437 | Protein_3612 | immunity 26/phosphotriesterase HocA family protein | - |
| PQP94_RS18470 () | 3714614..3715060 | - | 447 | WP_000935097.1 | protein SciX | - |
| PQP94_RS18475 () | 3715054..3715922 | - | 869 | Protein_3614 | polymorphic toxin type 47 domain-containing protein | - |
| PQP94_RS18480 () | 3715986..3716249 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| PQP94_RS18485 () | 3716243..3720337 | - | 4095 | WP_274895717.1 | RHS repeat-associated core domain-containing protein | - |
| PQP94_RS18490 () | 3720356..3720802 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.003 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.003 |