MGE detailed information
MGE type: Genomic_island MGE length: 12791 bp
Accession: NZ_CP117327 Location: 3558650..3571440 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 Replicon: chromosome
Accession: NZ_CP117327 Location: 3558650..3571440 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP95_RS17290 () | 3554282..3556726 | + | 2445 | WP_274891136.1 | acyl-CoA dehydrogenase FadE | - |
| PQP95_RS17295 () | 3556835..3557602 | + | 768 | WP_274891137.1 | amidohydrolase | - |
| PQP95_RS17300 () | 3557912..3558319 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQP95_RS17305 () | 3558650..3559369 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| PQP95_RS17310 () | 3559373..3559588 | - | 216 | WP_001532956.1 | hypothetical protein | - |
| PQP95_RS17315 () | 3559708..3560655 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQP95_RS17320 () | 3561149..3561389 | - | 241 | Protein_3382 | PerC family transcriptional regulator | - |
| PQP95_RS17325 () | 3561472..3562293 | - | 822 | WP_000119389.1 | polysaccharide deacetylase family protein | - |
| PQP95_RS17330 () | 3562700..3563170 | - | 471 | WP_023137641.1 | AfaD family invasin | - |
| PQP95_RS17335 () | 3563192..3565702 | - | 2511 | WP_023137640.1 | F1 capsule-anchoring protein | VF |
| PQP95_RS17340 () | 3565726..3566463 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| PQP95_RS17345 () | 3566547..3567059 | - | 513 | WP_274891138.1 | pilus assembly protein | - |
| PQP95_RS17350 () | 3567809..3568513 | - | 705 | Protein_3388 | integrase core domain-containing protein | - |
| PQP95_RS17355 () | 3568566..3568814 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PQP95_RS17360 () | 3568916..3569224 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| PQP95_RS17365 () | 3569307..3569423 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3569508..3569930 | - | 423 | - | - | Antitoxin Detail |
| PQP95_RS17370 () | 3569665..3569940 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP95_RS17375 () | 3569993..3570430 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PQP95_RS17380 () | 3570994..3571440 | - | 447 | WP_023137639.1 | protein SciX | - |
| PQP95_RS17385 () | 3571434..3575513 | - | 4080 | WP_000272660.1 | polymorphic toxin type 47 domain-containing protein | - |
| PQP95_RS17390 () | 3575532..3575978 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.008 |