MGE detailed information
MGE type: Genomic_island MGE length: 43619 bp
Accession: NZ_CP117299 Location: 1412880..1456498 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM-F22S Replicon: chromosome
Accession: NZ_CP117299 Location: 1412880..1456498 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM-F22S Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PH350_RS06745 () | 1408778..1409068 | + | 291 | WP_000175471.1 | hypothetical protein | - |
| PH350_RS06750 () | 1409130..1409672 | + | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PH350_RS06755 () | 1409696..1411204 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PH350_RS06760 () | 1411267..1411377 | + | 111 | WP_077907261.1 | BPSL0067 family protein | - |
| PH350_RS06765 () | 1411504..1411836 | + | 333 | WP_077905251.1 | hypothetical protein | - |
| PH350_RS06770 () | 1412090..1412575 | + | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| PH350_RS06775 () | 1412643..1412837 | + | 195 | Protein_1310 | type VI secretion system lipoprotein TssJ | - |
| PH350_RS06780 () | 1412880..1413365 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| PH350_RS06785 () | 1413350..1413733 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PH350_RS06790 () | 1413876..1414361 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| PH350_RS06795 () | 1414428..1414964 | + | 537 | WP_001007104.1 | hypothetical protein | VF |
| PH350_RS06800 () | 1414968..1416311 | + | 1344 | WP_017442155.1 | hypothetical protein | VF |
| PH350_RS06805 () | 1416308..1417612 | + | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| PH350_RS06810 () | 1417617..1418390 | + | 774 | WP_017442156.1 | Rap1a/Tai family immunity protein | - |
| PH350_RS06815 () | 1418592..1419023 | + | 432 | WP_077907262.1 | Shiga toxin A subunit | - |
| PH350_RS06820 () | 1419057..1422926 | + | 3870 | WP_017442158.1 | hypothetical protein | VF |
| PH350_RS06825 () | 1422926..1423693 | + | 768 | WP_001254130.1 | TagF domain-containing protein | - |
| PH350_RS06830 () | 1423736..1424206 | + | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| PH350_RS06835 () | 1424191..1424652 | + | 462 | WP_023218482.1 | hypothetical protein | - |
| PH350_RS06840 () | 1424688..1424783 | + | 96 | Protein_1323 | cytoplasmic protein | - |
| PH350_RS06845 () | 1424780..1425196 | + | 417 | WP_000759645.1 | DUF2195 family protein | - |
| PH350_RS06850 () | 1425220..1425741 | + | 522 | WP_077907259.1 | DUF2778 domain-containing protein | - |
| PH350_RS06855 () | 1426137..1428371 | + | 2235 | WP_017442160.1 | hypothetical protein | VF |
| PH350_RS06860 () | 1428431..1428889 | + | 459 | WP_000186513.1 | DcrB-related protein | - |
| PH350_RS06865 () | 1428905..1433590 | + | 4686 | WP_017442161.1 | hypothetical protein | VF |
| PH350_RS06870 () | 1433595..1433873 | + | 279 | WP_017442162.1 | hypothetical protein | - |
| PH350_RS06875 () | 1433920..1434126 | - | 207 | WP_026080916.1 | SymE family type I addiction module toxin | Toxin Detail |
| PH350_RS06880 () | 1434120..1435373 | + | 1254 | Protein_1331 | Putative deoxyribonuclease RhsC | VF |
| PH350_RS06885 () | 1435376..1435663 | + | 288 | WP_017442165.1 | hypothetical protein | - |
| PH350_RS06890 () | 1435732..1435866 | - | 135 | Protein_1333 | SymE family type I addiction module toxin | - |
| PH350_RS06895 () | 1436292..1437260 | + | 969 | Protein_1334 | hypothetical protein | VF |
| PH350_RS06900 () | 1437254..1437700 | + | 447 | WP_000935097.1 | protein SciX | - |
| PH350_RS06905 () | 1438219..1438701 | + | 483 | WP_017442170.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PH350_RS06910 () | 1438754..1438981 | - | 228 | WP_017442171.1 | SymE family type I addiction module toxin | Toxin Detail |
| PH350_RS06915 () | 1439164..1439280 | + | 117 | Protein_1338 | RHS repeat-associated core domain-containing protein | - |
| PH350_RS06920 () | 1439395..1439676 | + | 282 | WP_176132412.1 | hypothetical protein | - |
| PH350_RS06925 () | 1439673..1440119 | + | 447 | WP_017442172.1 | hypothetical protein | - |
| PH350_RS06930 () | 1440478..1440630 | + | 153 | WP_223195354.1 | hypothetical protein | - |
| PH350_RS06935 () | 1440651..1440929 | + | 279 | WP_197398372.1 | hypothetical protein | - |
| PH350_RS06940 () | 1440931..1441509 | + | 579 | WP_017442174.1 | hypothetical protein | - |
| PH350_RS06945 () | 1441714..1442091 | + | 378 | WP_223195355.1 | HNH endonuclease | - |
| PH350_RS06950 () | 1442088..1442444 | + | 357 | WP_017442175.1 | hypothetical protein | - |
| PH350_RS06955 () | 1442511..1442756 | - | 246 | WP_017442176.1 | hypothetical protein | Toxin Detail |
| - | 1442606..1442913 | + | 308 | - | - | Antitoxin Detail |
| PH350_RS06960 () | 1443090..1443383 | + | 294 | WP_129369132.1 | hypothetical protein | - |
| PH350_RS06965 () | 1443833..1444204 | + | 372 | WP_223195353.1 | hypothetical protein | - |
| PH350_RS06970 () | 1444201..1444668 | + | 468 | WP_017442178.1 | hypothetical protein | - |
| PH350_RS06975 () | 1444986..1445264 | + | 279 | WP_077907264.1 | hypothetical protein | - |
| PH350_RS06980 () | 1445331..1445645 | - | 315 | WP_072103451.1 | SymE family type I addiction module toxin | - |
| PH350_RS06985 () | 1445698..1445856 | + | 159 | Protein_1352 | transposase | - |
| PH350_RS06990 () | 1445924..1446481 | - | 558 | Protein_1353 | IS21 family transposase ISEc62 | Transposase |
| PH350_RS06995 () | 1447519..1448229 | + | 711 | WP_001009507.1 | hypothetical protein | VF |
| PH350_RS07000 () | 1448337..1448855 | + | 519 | WP_001056553.1 | CFA/I fimbrial subunit B | VF |
| PH350_RS07005 () | 1448964..1451651 | + | 2688 | WP_017442183.1 | hypothetical protein | VF |
| PH350_RS07010 () | 1451686..1452732 | + | 1047 | WP_086013164.1 | CfaE/CblD family pilus tip adhesin | - |
| PH350_RS07015 () | 1452865..1453320 | + | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| PH350_RS07020 () | 1453460..1454077 | + | 618 | WP_017442092.1 | protein TioA | - |
| PH350_RS07025 () | 1454680..1454813 | - | 134 | Protein_1360 | transposase | - |
| PH350_RS07030 () | 1454849..1455037 | + | 189 | Protein_1361 | hypothetical protein | - |
| PH350_RS07035 () | 1455041..1455760 | - | 720 | WP_000787605.1 | Outer membrane protein PagN | VF |
| PH350_RS07040 () | 1456091..1456498 | - | 408 | WP_001642720.1 | Spy/CpxP family protein refolding chaperone | - |
| PH350_RS07045 () | 1456808..1457575 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| PH350_RS07050 () | 1457684..1460128 | - | 2445 | WP_000973043.1 | acyl-CoA dehydrogenase FadE | - |
| PH350_RS07055 () | 1460368..1460946 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|