MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP117244 Location: 3707410..3721383 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Accession: NZ_CP117244 Location: 3707410..3721383 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ30_RS18285 () | 3702981..3705425 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PQQ30_RS18290 () | 3705534..3706301 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQQ30_RS18295 () | 3706672..3707079 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQQ30_RS18300 () | 3707410..3708129 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| PQQ30_RS18305 () | 3708133..3708348 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PQQ30_RS18310 () | 3708465..3709412 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQQ30_RS18315 () | 3709904..3710144 | - | 241 | Protein_3582 | PerC family transcriptional regulator | - |
| PQQ30_RS18320 () | 3710227..3711048 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| PQQ30_RS18325 () | 3711454..3711924 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| PQQ30_RS18330 () | 3711946..3714456 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| PQQ30_RS18335 () | 3714480..3715217 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| PQQ30_RS18340 () | 3715301..3715813 | - | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| PQQ30_RS18345 () | 3716563..3717267 | - | 705 | Protein_3588 | integrase core domain-containing protein | - |
| PQQ30_RS18350 () | 3717320..3717568 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PQQ30_RS18355 () | 3717670..3717978 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| PQQ30_RS18360 () | 3718061..3718177 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3718262..3718684 | - | 423 | - | - | Antitoxin Detail |
| PQQ30_RS18365 () | 3718419..3718694 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ30_RS18370 () | 3718747..3719184 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PQQ30_RS18375 () | 3719747..3720193 | - | 447 | WP_000935097.1 | protein SciX | - |
| PQQ30_RS18380 () | 3720187..3721056 | - | 870 | Protein_3595 | hypothetical protein | VF |
| PQQ30_RS18385 () | 3721120..3721383 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| PQQ30_RS18390 () | 3721377..3725471 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| PQQ30_RS18395 () | 3725490..3725936 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |