MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_CP117244 Location: 313610..322261 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Accession: NZ_CP117244 Location: 313610..322261 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ30_RS01405 (309415) | 309415..310518 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PQQ30_RS01410 (310601) | 310601..310735 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| PQQ30_RS01415 (310713) | 310713..311096 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PQQ30_RS01420 (311518) | 311518..312627 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PQQ30_RS01425 (312687) | 312687..313613 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PQQ30_RS01430 (313610) | 313610..314887 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| PQQ30_RS01435 (314884) | 314884..315651 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| PQQ30_RS01440 (315653) | 315653..316366 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PQQ30_RS01445 (316498) | 316498..316719 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQQ30_RS01450 (316716) | 316716..317084 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PQQ30_RS01455 (317343) | 317343..318659 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PQQ30_RS01460 (318723) | 318723..319610 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PQQ30_RS01465 (319607) | 319607..320452 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PQQ30_RS01470 (320454) | 320454..321524 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| PQQ30_RS01475 (321521) | 321521..322261 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| PQQ30_RS01480 (322274) | 322274..322690 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| PQQ30_RS01485 (322816) | 322816..324558 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| PQQ30_RS01490 (324603) | 324603..325637 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PQQ30_RS01495 (325634) | 325634..326605 | - | 972 | WP_001038951.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |