MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP117053 Location: 4280411..4281391 Organism: Escherichia coli strain MLI106K4 Replicon: chromosome
Accession: NZ_CP117053 Location: 4280411..4281391 Organism: Escherichia coli strain MLI106K4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL407_RS21845 (4276909) | 4276909..4277625 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NL407_RS21850 (4277645) | 4277645..4278751 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| NL407_RS21855 (4278816) | 4278816..4279796 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| NL407_RS21860 (4279906) | 4279906..4280111 | + | 206 | Protein_4057 | HNH endonuclease | - |
| NL407_RS21865 (4280411) | 4280411..4281391 | - | 981 | WP_000019400.1 | IS5 family transposase IS5D | Transposase |
| NL407_RS21870 (4281578) | 4281578..4282818 | - | 1241 | Protein_4059 | helicase YjhR | - |
| NL407_RS21875 (4282934) | 4282934..4283065 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| NL407_RS21880 (4283556) | 4283556..4283813 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| NL407_RS21885 (4283825) | 4283825..4284370 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| NL407_RS21890 (4284426) | 4284426..4285172 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| NL407_RS21895 (4285341) | 4285341..4285559 | + | 219 | Protein_4064 | hypothetical protein | - |
| NL407_RS21900 (4285597) | 4285597..4285713 | + | 117 | Protein_4065 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |