MGE detailed information
MGE type: Conjugative plasmid MGE length: 138420 bp
Accession: NZ_CP116481 Location: 1..138420 Organism: Escherichia coli strain GTEN_24 Replicon: plasmid unnamed1
Accession: NZ_CP116481 Location: 1..138420 Organism: Escherichia coli strain GTEN_24 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
E5Q65_RS23280 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
E5Q65_RS23285 (1263) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
E5Q65_RS23290 (2124) | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
E5Q65_RS23295 (2373) | 2373..2662 | - | 290 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
E5Q65_RS23300 (2649) | 2649..2917 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
E5Q65_RS23305 (3449) | 3449..4618 | + | 1170 | WP_023909118.1 | hypothetical protein | - |
E5Q65_RS23310 (4651) | 4651..4779 | + | 129 | Protein_6 | IS481 family transposase | - |
E5Q65_RS23315 (4814) | 4814..5002 | - | 189 | Protein_7 | hypothetical protein | - |
E5Q65_RS23320 (5050) | 5050..5747 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
E5Q65_RS23325 (5763) | 5763..5882 | + | 120 | Protein_9 | transcriptional regulator | - |
E5Q65_RS23330 (5860) | 5860..6483 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
E5Q65_RS23335 (6565) | 6565..7770 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
E5Q65_RS23340 (7883) | 7883..8128 | - | 246 | Protein_12 | transposase | - |
E5Q65_RS23350 (9265) | 9265..10245 | - | 981 | WP_031311978.1 | IS5 family transposase ISKpn26 | Transposase |
E5Q65_RS23355 (10319) | 10319..10978 | + | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
E5Q65_RS23360 (11179) | 11179..11556 | - | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
E5Q65_RS23365 (11623) | 11623..14589 | - | 2967 | WP_023909098.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
E5Q65_RS23370 (14592) | 14592..15002 | - | 411 | Protein_18 | Tn3 family transposase TnpR_TnAs3 | Transposase |
E5Q65_RS23375 (15068) | 15068..15772 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
E5Q65_RS23380 (15823) | 15823..15897 | - | 75 | Protein_20 | PadR family transcriptional regulator | - |
E5Q65_RS23385 (15908) | 15908..17113 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
E5Q65_RS23390 (17269) | 17269..17472 | - | 204 | WP_000376616.1 | hypothetical protein | - |
E5Q65_RS23395 (17600) | 17600..18439 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
E5Q65_RS23400 (18433) | 18433..18780 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
E5Q65_RS23405 (18897) | 18897..19735 | - | 839 | Protein_25 | Streptomycin 3''-adenylyltransferase | ARG |
E5Q65_RS23410 (19741) | 19741..20031 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
E5Q65_RS23415 (20143) | 20143..20640 | - | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
E5Q65_RS23420 (20785) | 20785..21084 | + | 300 | Protein_28 | 60 kDa chaperonin | VF |
E5Q65_RS23425 (21085) | 21085..21438 | + | 354 | Protein_29 | 60 kDa chaperonin | VF |
E5Q65_RS23430 (21713) | 21713..23197 | + | 1485 | WP_022742855.1 | IS91 family transposase | - |
E5Q65_RS23435 (23436) | 23436..23822 | + | 387 | Protein_31 | mechanosensitive ion channel | - |
E5Q65_RS23440 (23850) | 23850..25385 | - | 1536 | WP_064760451.1 | fluoroquinolone efflux MFS transporter QepA4 | ARG |
E5Q65_RS23445 (25780) | 25780..26793 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
E5Q65_RS23450 (26996) | 26996..27346 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
E5Q65_RS23455 (27472) | 27472..27627 | + | 156 | Protein_35 | Tn3 family transposase TnpR_TnAs3 | Transposase |
E5Q65_RS23460 (27680) | 27680..28384 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
E5Q65_RS23465 (28447) | 28447..28935 | - | 489 | Protein_37 | IS6 family transposase IS15 | Transposase |
E5Q65_RS23470 (29000) | 29000..29239 | + | 240 | Protein_38 | Transcriptional regulator | Relaxase |
E5Q65_RS23475 (29283) | 29283..29348 | + | 66 | Protein_39 | EAL domain-containing protein | - |
E5Q65_RS23480 (29466) | 29466..30230 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
E5Q65_RS23485 (30723) | 30723..31307 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
E5Q65_RS23490 (31307) | 31307..32545 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
E5Q65_RS23495 (32542) | 32542..33447 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
E5Q65_RS23500 (33569) | 33569..34273 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
E5Q65_RS23505 (34408) | 34408..34503 | + | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
E5Q65_RS23510 (34629) | 34629..35366 | + | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
E5Q65_RS23515 (35996) | 35996..36445 | + | 450 | WP_013362817.1 | hypothetical protein | - |
E5Q65_RS23520 (36406) | 36406..36747 | + | 342 | WP_023909256.1 | 60 kDa chaperonin | VF |
E5Q65_RS23525 (37022) | 37022..38506 | + | 1485 | WP_032152108.1 | IS91 family transposase | - |
E5Q65_RS23530 (38829) | 38829..39533 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
E5Q65_RS23535 (39598) | 39598..39864 | + | 267 | Protein_51 | Tn3 family transposase TnpA_Tn3 | Transposase |
E5Q65_RS23540 (39941) | 39941..40645 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
E5Q65_RS23545 (40711) | 40711..41256 | + | 546 | Protein_53 | Tn3 family transposase TnpA_Tn3 | Transposase |
E5Q65_RS23550 (41292) | 41292..41707 | - | 416 | Protein_54 | IS1-like element IS1B family transposase | - |
E5Q65_RS23555 (41956) | 41956..42357 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
E5Q65_RS23560 (42290) | 42290..42547 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
E5Q65_RS23565 (42640) | 42640..43293 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
E5Q65_RS23570 (44232) | 44232..45089 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
E5Q65_RS23575 (45082) | 45082..45156 | - | 75 | WP_014966221.1 | RepA leader peptide Tap | - |
E5Q65_RS23580 (45518) | 45518..47059 | + | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
E5Q65_RS23585 (47074) | 47074..47820 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
E5Q65_RS23590 (47980) | 47980..48234 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
E5Q65_RS23595 (48531) | 48531..48665 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
- (48710) | 48710..48770 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
- (48710) | 48710..48770 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
- (48710) | 48710..48770 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
- (48710) | 48710..48770 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
E5Q65_RS23600 (48737) | 48737..49023 | - | 287 | Protein_64 | DUF2726 domain-containing protein | - |
E5Q65_RS23605 (49536) | 49536..49748 | - | 213 | WP_013023861.1 | hypothetical protein | - |
E5Q65_RS23610 (49879) | 49879..50439 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
E5Q65_RS23615 (50494) | 50494..51240 | - | 747 | WP_023909066.1 | conjugal transfer pilus acetylase TraX | - |
E5Q65_RS23620 (51260) | 51260..56530 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
E5Q65_RS23625 (56530) | 56530..58737 | - | 2208 | WP_021547900.1 | type IV conjugative transfer system coupling protein TraD | - |
E5Q65_RS23630 (58734) | 58734..59513 | - | 780 | WP_000199914.1 | hypothetical protein | - |
E5Q65_RS23635 (59716) | 59716..60447 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
E5Q65_RS23640 (60479) | 60479..60976 | - | 498 | WP_033876670.1 | entry exclusion protein | - |
E5Q65_RS23645 (60995) | 60995..63814 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
E5Q65_RS23650 (63811) | 63811..65184 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
E5Q65_RS23655 (65171) | 65171..65563 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
E5Q65_RS23660 (65544) | 65544..65891 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
E5Q65_RS23665 (65821) | 65821..66366 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
E5Q65_RS23670 (66353) | 66353..66637 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
E5Q65_RS23675 (66764) | 66764..67084 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
E5Q65_RS23685 (67885) | 67885..68151 | - | 267 | Protein_81 | conjugal transfer protein TrbD | - |
E5Q65_RS23690 (68090) | 68090..68656 | - | 567 | WP_000896601.1 | conjugal transfer pilus-stabilizing protein TraP | - |
E5Q65_RS23695 (68646) | 68646..70097 | - | 1452 | WP_000146687.1 | F-type conjugal transfer pilus assembly protein TraB | - |
E5Q65_RS23700 (70097) | 70097..70825 | - | 729 | WP_001230808.1 | type-F conjugative transfer system secretin TraK | - |
E5Q65_RS23705 (70812) | 70812..71378 | - | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
E5Q65_RS23710 (71400) | 71400..71711 | - | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
E5Q65_RS23715 (71716) | 71716..72078 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
E5Q65_RS23720 (72112) | 72112..72339 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
E5Q65_RS23725 (72427) | 72427..73104 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
E5Q65_RS23730 (73238) | 73238..73621 | - | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
E5Q65_RS23735 (73952) | 73952..74554 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
E5Q65_RS23740 (74851) | 74851..75672 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
E5Q65_RS23745 (75791) | 75791..76078 | - | 288 | WP_000107535.1 | hypothetical protein | - |
E5Q65_RS23750 (76103) | 76103..76309 | - | 207 | WP_000275859.1 | hypothetical protein | - |
E5Q65_RS23755 (76379) | 76379..76552 | + | 174 | Protein_95 | hypothetical protein | - |
E5Q65_RS23760 (76550) | 76550..76780 | - | 231 | WP_001426396.1 | hypothetical protein | - |
E5Q65_RS23765 (77000) | 77000..77125 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
E5Q65_RS23770 (77067) | 77067..77216 | - | 150 | Protein_98 | plasmid maintenance protein Mok | - |
- (77202) | 77202..77240 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
- (77202) | 77202..77240 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
- (77202) | 77202..77240 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
- (77202) | 77202..77240 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
- (78680) | 78680..78782 | - | 103 | NuclAT_0 | - | - |
- (78680) | 78680..78782 | - | 103 | NuclAT_0 | - | - |
- (78680) | 78680..78782 | - | 103 | NuclAT_0 | - | - |
- (78680) | 78680..78782 | - | 103 | NuclAT_0 | - | - |
E5Q65_RS23780 (78751) | 78751..79513 | - | 763 | Protein_100 | plasmid SOS inhibition protein A | - |
E5Q65_RS23785 (79510) | 79510..79944 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
E5Q65_RS23790 (80013) | 80013..82036 | - | 2024 | Protein_102 | ParB/RepB/Spo0J family partition protein | - |
E5Q65_RS23795 (82097) | 82097..82330 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
E5Q65_RS23800 (82388) | 82388..82873 | - | 486 | WP_031311812.1 | single-stranded DNA-binding protein | - |
E5Q65_RS23805 (83023) | 83023..84924 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
E5Q65_RS23810 (85878) | 85878..86333 | + | 456 | Protein_106 | hypothetical protein | - |
E5Q65_RS23815 (86419) | 86419..86982 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
E5Q65_RS23820 (87029) | 87029..88390 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
E5Q65_RS23825 (88442) | 88442..88672 | - | 231 | WP_000218642.1 | hypothetical protein | - |
E5Q65_RS23830 (89710) | 89710..89901 | - | 192 | WP_001027493.1 | hypothetical protein | - |
E5Q65_RS23835 (89898) | 89898..90320 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
E5Q65_RS23840 (90367) | 90367..90792 | - | 426 | WP_001198928.1 | antirestriction protein | - |
E5Q65_RS23845 (91210) | 91210..91986 | - | 777 | WP_001383963.1 | hypothetical protein | - |
E5Q65_RS23850 (92037) | 92037..92471 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
E5Q65_RS23855 (92485) | 92485..92706 | - | 222 | WP_001104881.1 | hypothetical protein | - |
E5Q65_RS23860 (92707) | 92707..93390 | - | 684 | WP_000086185.1 | DNA methylase | - |
E5Q65_RS23865 (93467) | 93467..93778 | - | 312 | WP_011254640.1 | hypothetical protein | - |
E5Q65_RS23870 (93775) | 93775..94677 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
E5Q65_RS23875 (95544) | 95544..96515 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
E5Q65_RS23880 (96515) | 96515..97681 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
E5Q65_RS23885 (98269) | 98269..99024 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
E5Q65_RS23890 (99798) | 99798..100604 | - | 807 | WP_000016982.1 | site-specific integrase | - |
E5Q65_RS23895 (100605) | 100605..100910 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
E5Q65_RS23900 (100912) | 100912..101130 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
E5Q65_RS23905 (101764) | 101764..101961 | + | 198 | WP_000215657.1 | hypothetical protein | - |
E5Q65_RS23910 (101958) | 101958..102242 | - | 285 | WP_000642771.1 | hypothetical protein | - |
E5Q65_RS23915 (102262) | 102262..103395 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
E5Q65_RS23920 (103658) | 103658..106777 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
E5Q65_RS23925 (107084) | 107084..107314 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
E5Q65_RS23930 (107311) | 107311..107727 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
E5Q65_RS23935 (107889) | 107889..108896 | - | 1008 | Protein_131 | AAA family ATPase | - |
E5Q65_RS23940 (108959) | 108959..109663 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
E5Q65_RS23945 (109716) | 109716..109940 | + | 225 | Protein_133 | IS6 family transposase IS26 | Transposase |
E5Q65_RS23950 (110126) | 110126..111109 | + | 984 | WP_113962661.1 | IS481 family transposase ISKpn27 | Transposase |
E5Q65_RS23955 (111480) | 111480..112955 | + | 1476 | WP_000052512.1 | ABC-F type ribosomal protection protein Msr(E) | ARG |
E5Q65_RS23960 (113011) | 113011..113895 | + | 885 | WP_000155092.1 | hypothetical protein | ARG |
E5Q65_RS23965 (114034) | 114034..114291 | - | 258 | WP_159516864.1 | hypothetical protein | - |
E5Q65_RS23970 (114395) | 114395..115099 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
E5Q65_RS23975 (115154) | 115154..115408 | + | 255 | Protein_139 | SDR family oxidoreductase | - |
E5Q65_RS23980 (115504) | 115504..116148 | - | 645 | WP_017900990.1 | Pentapeptide repeat protein | ARG |
E5Q65_RS23985 (116231) | 116231..117205 | - | 975 | WP_004193248.1 | Psp operon transcriptional activator | VF |
E5Q65_RS23990 (117376) | 117376..118044 | + | 669 | WP_003020532.1 | phage shock protein PspA | - |
E5Q65_RS23995 (118099) | 118099..118323 | + | 225 | WP_004193245.1 | envelope stress response membrane protein PspB | - |
E5Q65_RS24000 (118323) | 118323..118682 | + | 360 | WP_004193243.1 | envelope stress response membrane protein PspC | - |
E5Q65_RS24005 (118691) | 118691..118921 | + | 231 | WP_004193241.1 | phage shock protein PspD | - |
E5Q65_RS24010 (119110) | 119110..119298 | - | 189 | Protein_146 | LacI family transcriptional regulator | - |
E5Q65_RS24015 (119256) | 119256..120077 | - | 822 | WP_013214003.1 | hypothetical protein | - |
E5Q65_RS24020 (120272) | 120272..121411 | - | 1140 | WP_004236386.1 | Beta-lactamase | ARG |
E5Q65_RS24025 (121522) | 121522..122397 | + | 876 | WP_004193231.1 | LysR family transcriptional regulator AmpR | - |
E5Q65_RS24030 (122401) | 122401..122766 | - | 366 | WP_025999322.1 | hydrogenase maturation nickel metallochaperone HypA | - |
E5Q65_RS24035 (122659) | 122659..122994 | + | 336 | WP_052238321.1 | SMR family transporter | - |
E5Q65_RS24040 (122988) | 122988..123827 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
E5Q65_RS24045 (123955) | 123955..124455 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
E5Q65_RS24050 (124531) | 124531..125235 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
E5Q65_RS24055 (125126) | 125126..126427 | - | 1302 | WP_272056125.1 | hypothetical protein | - |
E5Q65_RS24060 (126892) | 126892..127887 | + | 996 | WP_000246636.1 | hypothetical protein | - |
E5Q65_RS24065 (127930) | 127930..128823 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
E5Q65_RS24075 (129871) | 129871..132987 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
E5Q65_RS24080 (133109) | 133109..134380 | - | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
E5Q65_RS24085 (134377) | 134377..135933 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
E5Q65_RS24090 (136116) | 136116..136337 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
E5Q65_RS24095 (136337) | 136337..136717 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
E5Q65_RS24100 (136722) | 136722..136901 | + | 180 | WP_001513661.1 | hypothetical protein | - |
E5Q65_RS24105 (136929) | 136929..137207 | + | 279 | Protein_165 | pdcB | - |
E5Q65_RS24110 (137212) | 137212..137625 | + | 414 | Protein_166 | IS3 family transposase ISLad1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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