MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108065 bp
Accession: NZ_CP116195 Location: 1..108065 Organism: Escherichia coli strain DETEC-E1005 Replicon: plasmid pDETEC3
Accession: NZ_CP116195 Location: 1..108065 Organism: Escherichia coli strain DETEC-E1005 Replicon: plasmid pDETEC3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB63_RS24180 (PIB63_24180) | 1..978 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| PIB63_RS24185 (PIB63_24185) | 1221..1961 | - | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| PIB63_RS24190 (PIB63_24190) | 2082..2270 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| PIB63_RS24195 (PIB63_24195) | 2637..3806 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| PIB63_RS24200 (PIB63_24200) | 4032..4207 | - | 176 | Protein_4 | IS3 family transposase | - |
| PIB63_RS24205 (PIB63_24205) | 4653..4925 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| PIB63_RS24210 (PIB63_24210) | 5462..5886 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| PIB63_RS24215 (PIB63_24215) | 6168..8138 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| PIB63_RS24220 (PIB63_24220) | 8145..8936 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| PIB63_RS24225 (PIB63_24225) | 8999..9607 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| PIB63_RS24230 (PIB63_24230) | 9675..10457 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| PIB63_RS24235 (PIB63_24235) | 10454..11476 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| PIB63_RS24240 (PIB63_24240) | 11562..12507 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| PIB63_RS24245 (PIB63_24245) | 12556..12903 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| PIB63_RS24250 (PIB63_24250) | 12900..13304 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| PIB63_RS24255 (PIB63_24255) | 13384..13722 | - | 339 | Protein_15 | IS3 family transposase IS629 | Transposase |
| PIB63_RS24260 (PIB63_24260) | 13806..15314 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| PIB63_RS24265 (PIB63_24265) | 15987..16726 | - | 740 | Protein_17 | IS3 family transposase IS629 | Transposase |
| PIB63_RS24270 (PIB63_24270) | 16828..17088 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| PIB63_RS24275 (PIB63_24275) | 17085..17594 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| PIB63_RS24280 (PIB63_24280) | 17614..17961 | - | 348 | WP_000142452.1 | DUF6404 family protein | - |
| PIB63_RS24285 (PIB63_24285) | 18090..18425 | + | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| PIB63_RS24290 (PIB63_24290) | 19877..20502 | + | 626 | Protein_22 | replication initiation protein | - |
| PIB63_RS24295 (PIB63_24295) | 20876..21751 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| PIB63_RS24300 (PIB63_24300) | 21759..22535 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| PIB63_RS24305 (PIB63_24305) | 22704..24965 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| PIB63_RS24310 (PIB63_24310) | 25034..26209 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| PIB63_RS24315 (PIB63_24315) | 26732..27037 | - | 306 | Protein_27 | IS91 family transposase ISSbo1 | Transposase |
| PIB63_RS24320 (PIB63_24320) | 27063..27802 | + | 740 | Protein_28 | IS3 family transposase IS629 | Transposase |
| PIB63_RS24325 (PIB63_24325) | 28475..28789 | + | 315 | Protein_29 | IS5 family transposase ISKpn26 | Transposase |
| PIB63_RS24330 (PIB63_24330) | 28790..28963 | + | 174 | Protein_30 | IS5 family transposase ISKpn26 | Transposase |
| PIB63_RS24335 (PIB63_24335) | 29113..29746 | - | 634 | Protein_31 | histidine-type phosphatase | - |
| PIB63_RS24340 (PIB63_24340) | 29868..30353 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| PIB63_RS24345 (PIB63_24345) | 30378..30863 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| PIB63_RS24350 (PIB63_24350) | 30850..31545 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| PIB63_RS24355 (PIB63_24355) | 31550..32680 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| PIB63_RS24360 (PIB63_24360) | 32670..33953 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| PIB63_RS24365 (PIB63_24365) | 33956..35335 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| PIB63_RS24370 (PIB63_24370) | 35439..35966 | - | 528 | WP_000178050.1 | iron transporter | - |
| PIB63_RS24375 (PIB63_24375) | 36007..37893 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| PIB63_RS24380 (PIB63_24380) | 38240..39001 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| PIB63_RS24385 (PIB63_24385) | 39238..39744 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| PIB63_RS24390 (PIB63_24390) | 39734..39904 | - | 171 | Protein_42 | DsbA family protein | - |
| PIB63_RS24395 (PIB63_24395) | 40042..40155 | - | 114 | Protein_43 | IS6 family transposase IS15DI | Transposase |
| PIB63_RS24400 (PIB63_24400) | 40355..40962 | + | 608 | Protein_44 | IS1 family transposase IS1R | Transposase |
| PIB63_RS24405 (PIB63_24405) | 41016..41720 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB63_RS24410 (PIB63_24410) | 41785..42048 | + | 264 | Protein_46 | IS6 family transposase IS6100 | Transposase |
| PIB63_RS24415 (PIB63_24415) | 42541..43125 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| PIB63_RS24420 (PIB63_24420) | 43125..44363 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| PIB63_RS24425 (PIB63_24425) | 44360..45265 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| PIB63_RS24430 (PIB63_24430) | 45387..46091 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB63_RS24435 (PIB63_24435) | 46261..46542 | - | 282 | Protein_51 | IS91 family transposase ISPps1 | Transposase |
| PIB63_RS24440 (PIB63_24440) | 46689..47549 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| PIB63_RS24445 (PIB63_24445) | 47732..48070 | - | 339 | Protein_53 | Tn3 family transposase TnpR_Tn3 | Transposase |
| PIB63_RS24450 (PIB63_24450) | 48134..48838 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB63_RS24455 (PIB63_24455) | 49133..52099 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| PIB63_RS24460 (PIB63_24460) | 52102..52662 | - | 561 | WP_021532377.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| PIB63_RS24465 (PIB63_24465) | 52702..53399 | - | 698 | Protein_57 | IS6 family transposase | - |
| PIB63_RS24470 (PIB63_24470) | 53464..53559 | + | 96 | Protein_58 | IS1 family transposase | - |
| PIB63_RS24475 (PIB63_24475) | 53574..54737 | + | 1164 | Protein_59 | IS4 family transposase IS10R | Transposase |
| PIB63_RS24480 (PIB63_24480) | 54747..55163 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| PIB63_RS24485 (PIB63_24485) | 55251..55844 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| PIB63_RS24490 (PIB63_24490) | 55957..57162 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| PIB63_RS24495 (PIB63_24495) | 57244..57867 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| PIB63_RS24500 (PIB63_24500) | 57845..57937 | - | 93 | Protein_64 | transcriptional regulator | - |
| PIB63_RS24505 (PIB63_24505) | 57988..58685 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| PIB63_RS24510 (PIB63_24510) | 58735..59208 | - | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| PIB63_RS24515 (PIB63_24515) | 59366..60379 | + | 1014 | WP_000845046.1 | IS91 family transposase ISAzo26 | Transposase |
| PIB63_RS24520 (PIB63_24520) | 60582..60932 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| PIB63_RS24525 (PIB63_24525) | 61142..61846 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB63_RS24530 (PIB63_24530) | 61896..62615 | + | 720 | Protein_70 | helicase RepA family protein | - |
| PIB63_RS24535 (PIB63_24535) | 62602..63453 | + | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| PIB63_RS24540 (PIB63_24540) | 63761..64576 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| PIB63_RS24545 (PIB63_24545) | 64637..65440 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PIB63_RS24550 (PIB63_24550) | 65440..66276 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PIB63_RS24555 (PIB63_24555) | 66337..67041 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PIB63_RS24560 (PIB63_24560) | 67106..68356 | - | 1251 | Protein_76 | transposase | - |
| PIB63_RS24565 (PIB63_24565) | 68431..69099 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| PIB63_RS24570 (PIB63_24570) | 69135..69371 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| PIB63_RS24575 (PIB63_24575) | 69368..69730 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| PIB63_RS24580 (PIB63_24580) | 69748..71442 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| PIB63_RS24585 (PIB63_24585) | 71494..71916 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| PIB63_RS24590 (PIB63_24590) | 71952..72227 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| PIB63_RS24595 (PIB63_24595) | 72241..72591 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| PIB63_RS24600 (PIB63_24600) | 72663..73097 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| PIB63_RS24610 (PIB63_24610) | 74150..74551 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PIB63_RS24615 (PIB63_24615) | 74484..74741 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PIB63_RS24620 (PIB63_24620) | 74834..75487 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| PIB63_RS24625 (PIB63_24625) | 75950..76489 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| PIB63_RS24630 (PIB63_24630) | 76515..76721 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| PIB63_RS24635 (PIB63_24635) | 76962..77231 | - | 270 | WP_071977877.1 | hypothetical protein | - |
| PIB63_RS24640 (PIB63_24640) | 77132..77365 | - | 234 | WP_271291450.1 | hypothetical protein | - |
| PIB63_RS24645 (PIB63_24645) | 77365..77928 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| PIB63_RS24650 (PIB63_24650) | 77976..79336 | - | 1361 | Protein_94 | DUF3560 domain-containing protein | - |
| PIB63_RS24655 (PIB63_24655) | 79388..79618 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| PIB63_RS24660 (PIB63_24660) | 80653..80844 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| PIB63_RS24665 (PIB63_24665) | 80841..81263 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| PIB63_RS24670 (PIB63_24670) | 81310..81735 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| PIB63_RS24675 (PIB63_24675) | 82152..82928 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| PIB63_RS24680 (PIB63_24680) | 82979..83497 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| PIB63_RS24685 (PIB63_24685) | 83427..83648 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| PIB63_RS24690 (PIB63_24690) | 83649..84332 | - | 684 | WP_000086185.1 | DNA methylase | - |
| PIB63_RS24695 (PIB63_24695) | 84409..84720 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| PIB63_RS24700 (PIB63_24700) | 84717..85619 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| PIB63_RS24705 (PIB63_24705) | 86486..87457 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| PIB63_RS24710 (PIB63_24710) | 87457..88623 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| PIB63_RS24715 (PIB63_24715) | 89211..89966 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| PIB63_RS24720 (PIB63_24720) | 90740..91546 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| PIB63_RS24725 (PIB63_24725) | 91547..91852 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PIB63_RS24730 (PIB63_24730) | 91854..92072 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PIB63_RS24735 (PIB63_24735) | 92663..93151 | + | 489 | WP_011254646.1 | hypothetical protein | - |
| PIB63_RS24740 (PIB63_24740) | 93185..94318 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| PIB63_RS24745 (PIB63_24745) | 94485..95258 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| PIB63_RS24750 (PIB63_24750) | 95271..95771 | - | 501 | WP_001773886.1 | HEPN family nuclease | - |
| PIB63_RS24755 (PIB63_24755) | 96036..96266 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PIB63_RS24760 (PIB63_24760) | 96263..96679 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PIB63_RS24765 (PIB63_24765) | 96724..100518 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| PIB63_RS24770 (PIB63_24770) | 100899..101129 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PIB63_RS24775 (PIB63_24775) | 101126..101542 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PIB63_RS24780 (PIB63_24780) | 101617..103182 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| PIB63_RS24785 (PIB63_24785) | 103167..104189 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| PIB63_RS24795 (PIB63_24795) | 105443..106140 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| PIB63_RS24800 (PIB63_24800) | 106320..106833 | - | 514 | Protein_124 | DUF4113 domain-containing protein | - |
| PIB63_RS24805 (PIB63_24805) | 106894..106998 | - | 105 | Protein_125 | AAA family ATPase | - |
| PIB63_RS24810 (PIB63_24810) | 107000..107323 | - | 324 | Protein_126 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|