MGE detailed information

MGE type: Conjugative plasmid        MGE length: 159559 bp
Accession: NZ_CP116111        Location: 1..159559         Organism: Escherichia coli strain DETEC-P80       Replicon: plasmid pDETEC19


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PIC84_RS22930 (283) 283..477 + 195 Protein_0 IS200-IS605 family transposase IS200C Transposase
PIC84_RS22935 (606) 606..1547 - 942 WP_000974762.1 hypothetical protein -
PIC84_RS22940 (1782) 1782..3171 - 1390 Protein_2 ISNCY family transposase ISKpn21 Transposase
PIC84_RS22945 (3481) 3481..3630 - 150 Protein_3 IS3 family transposase IS2 Transposase
PIC84_RS22950 (3808) 3808..5001 - 1194 WP_000450494.1 GTP-binding protein -
PIC84_RS22955 (6243) 6243..6980 - 738 Protein_5 IS3 family transposase IS2 Transposase
PIC84_RS22960 (7033) 7033..8195 + 1163 WP_085947598.1 IS3 family transposase ISEc17 Transposase
PIC84_RS22965 (8212) 8212..8732 - 521 Protein_7 IS3 family transposase IS2 Transposase
PIC84_RS22970 (9357) 9357..9650 + 294 WP_000738422.1 increased serum survival lipoprotein Iss -
PIC84_RS22975 (9708) 9708..9907 - 200 Protein_9 lysis protein -
PIC84_RS22980 (10461) 10461..11485 + 1025 Protein_10 integrase core domain-containing protein -
PIC84_RS22985 (12796) 12796..13911 + 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
PIC84_RS22990 (14051) 14051..17710 + 3660 WP_001389363.1 Multidrug efflux ATP-binding/permease protein VF
PIC84_RS22995 (17814) 17814..19043 + 1230 WP_000933675.1 Enterochelin esterase VF
PIC84_RS23000 (19128) 19128..20084 + 957 WP_064055648.1 hypothetical protein VF
PIC84_RS23005 (20129) 20129..22306 - 2178 WP_001222186.1 Ferric enterobactin receptor VF
PIC84_RS23010 (22541) 22541..23238 + 698 WP_095033700.1 IS1-like element IS1B family transposase -
PIC84_RS23015 (23255) 23255..23452 - 198 Protein_17 colicin V -
PIC84_RS23020 (23430) 23430..23666 - 237 WP_014640552.1 colicin V immunity protein -
PIC84_RS23025 (23938) 23938..25050 - 1113 WP_001300563.1 IS4 family transposase IS421 Transposase
PIC84_RS23030 (25558) 25558..25761 - 204 Protein_20 hypothetical protein -
PIC84_RS23035 (25934) 25934..26101 + 168 Protein_21 colicin-B -
PIC84_RS23040 (26119) 26119..26646 - 528 WP_000203272.1 colicin B immunity protein -
PIC84_RS23045 (26890) 26890..27705 + 816 WP_001312845.1 lipid II-degrading bacteriocin colicin M -
PIC84_RS23050 (27755) 27755..28108 - 354 WP_000864812.1 colicin M immunity protein -
PIC84_RS23055 (28286) 28286..29077 - 792 WP_086669501.1 site-specific integrase -
PIC84_RS23060 (29074) 29074..29763 - 690 WP_000796228.1 hypothetical protein -
PIC84_RS23065 (29807) 29807..30157 - 351 WP_000493379.1 hypothetical protein -
PIC84_RS23070 (30689) 30689..34504 - 3816 WP_223364258.1 hypothetical protein -
PIC84_RS23075 (34730) 34730..34915 + 186 Protein_29 hypothetical protein -
PIC84_RS23080 (34933) 34933..35280 - 348 WP_000142450.1 DUF6404 family protein -
PIC84_RS23085 (35582) 35582..36064 - 483 WP_001311056.1 hypothetical protein -
PIC84_RS23090 (36181) 36181..37029 - 849 WP_023154360.1 3'-5' exonuclease -
PIC84_RS23095 (37075) 37075..37353 - 279 WP_097309154.1 type II toxin-antitoxin system toxin YacB -
PIC84_RS23100 (37463) 37463..39214 - 1752 Protein_34 Tn3 family transposase TnpA_TnAs1 Transposase
PIC84_RS23105 (39218) 39218..39610 + 393 WP_001351729.1 isochorismatase family cysteine hydrolase -
PIC84_RS23110 (39748) 39748..40632 + 885 WP_000058717.1 EamA family transporter -
PIC84_RS23115 (40664) 40664..41863 - 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
PIC84_RS23120 (41969) 41969..42619 + 651 WP_001493764.1 tetracycline resistance transcriptional repressor TetR(A) -
PIC84_RS23125 (42651) 42651..42893 - 243 WP_000844627.1 transposase -
PIC84_RS23130 (42951) 42951..43667 - 717 Protein_40 Tn3 family transposase TnpA_TnAs1 Transposase
PIC84_RS23135 (43701) 43701..44999 - 1299 Protein_41 Tn3 family transposase TnpA_Tn3 Transposase
PIC84_RS23140 (45067) 45067..45771 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
PIC84_RS23145 (45965) 45965..46351 + 387 WP_063102497.1 bleomycin binding protein -
PIC84_RS23150 (46671) 46671..47063 - 393 WP_064055682.1 pyridoxamine 5'-phosphate oxidase family protein -
PIC84_RS23155 (47398) 47398..48102 - 705 WP_001067858.1 IS6-like element IS26 family transposase -
PIC84_RS23160 (48422) 48422..49606 + 1185 WP_104717734.1 Efflux pump periplasmic linker BepF VF
PIC84_RS23165 (49630) 49630..52782 + 3153 WP_072647245.1 multidrug efflux RND transporter permease subunit OqxB VF
PIC84_RS23170 (52852) 52852..53331 - 480 WP_000888203.1 Rrf2 family transcriptional regulator -
PIC84_RS23175 (53433) 53433..54137 - 705 WP_272756113.1 IS6-like element IS26 family transposase -
PIC84_RS23180 (54203) 54203..54412 - 210 Protein_50 IS6 family transposase IS15 Transposase
PIC84_RS23185 (54425) 54425..55285 - 861 WP_000557452.1 SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
PIC84_RS23190 (55392) 55392..56096 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
PIC84_RS23195 (56218) 56218..57123 + 906 WP_000219391.1 hypothetical protein ARG
PIC84_RS23200 (57120) 57120..58358 + 1239 WP_064986949.1 macrolide resistance MFS transporter Mrx(A) -
PIC84_RS23205 (58358) 58358..58942 + 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
PIC84_RS23210 (59435) 59435..60199 - 765 WP_001389365.1 IS6-like element IS6100 family transposase -
PIC84_RS23215 (60317) 60317..60382 - 66 Protein_57 EAL domain-containing protein -
PIC84_RS23220 (60426) 60426..60731 - 306 WP_000130000.1 Transcriptional regulator Relaxase
PIC84_RS23225 (60742) 60742..61947 - 1206 WP_072647236.1 chromate efflux transporter -
PIC84_RS23230 (62103) 62103..62306 - 204 WP_000376616.1 hypothetical protein -
PIC84_RS23235 (62434) 62434..63273 - 840 WP_000259031.1 Dihydropteroate synthase ARG
PIC84_RS23240 (63267) 63267..63614 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
PIC84_RS23245 (63820) 63820..64608 - 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
PIC84_RS23250 (64739) 64739..65212 - 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
PIC84_RS23255 (65370) 65370..66383 + 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
PIC84_RS23260 (66586) 66586..66774 + 189 Protein_66 EAL domain-containing protein -
PIC84_RS23265 (66808) 66808..67512 - 705 WP_001067858.1 IS6-like element IS26 family transposase -
PIC84_RS23270 (67779) 67779..69215 + 1437 WP_000105383.1 glutathione synthase -
PIC84_RS23275 (69809) 69809..70537 - 729 WP_259638695.1 replication initiation protein -
PIC84_RS23280 (70543) 70543..71247 - 705 WP_001067858.1 Tn3 family transposase TnpR_Tn3 Transposase
PIC84_RS23285 (71311) 71311..71649 + 339 Protein_71 Tn3 family transposase TnpR_Tn3 Transposase
PIC84_RS23290 (71832) 71832..72692 + 861 WP_000027057.1 Beta-lactamase TEM ARG
PIC84_RS23295 (72842) 72842..72940 - 99 Protein_73 IS1 family transposase -
PIC84_RS23300 (72969) 72969..74279 - 1311 WP_001262765.1 DUF262 domain-containing protein -
PIC84_RS23305 (74564) 74564..74965 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
PIC84_RS23310 (74898) 74898..75155 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
PIC84_RS23315 (75248) 75248..75901 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
PIC84_RS23320 (75999) 75999..76139 - 141 WP_001333237.1 hypothetical protein -
PIC84_RS23325 (76840) 76840..77697 - 858 WP_000774297.1 incFII family plasmid replication initiator RepA -
PIC84_RS23330 (77690) 77690..78172 - 483 WP_001273588.1 hypothetical protein -
PIC84_RS23335 (78165) 78165..78212 - 48 WP_229471593.1 hypothetical protein -
PIC84_RS23340 (78203) 78203..78454 + 252 WP_223195197.1 replication protein RepA -
PIC84_RS23345 (78471) 78471..78728 - 258 WP_000083845.1 replication regulatory protein RepA -
PIC84_RS23350 (79012) 79012..79161 - 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
- (79205) 79205..79266 + 62 NuclAT_1 - Antitoxin Detail
- (79205) 79205..79266 + 62 NuclAT_1 - Antitoxin Detail
- (79205) 79205..79266 + 62 NuclAT_1 - Antitoxin Detail
- (79205) 79205..79266 + 62 NuclAT_1 - Antitoxin Detail
PIC84_RS23355 (79522) 79522..79596 - 75 Protein_85 endonuclease -
PIC84_RS23360 (79842) 79842..80054 - 213 WP_001299730.1 ANR family transcriptional regulator -
PIC84_RS23365 (80190) 80190..80750 - 561 WP_000139315.1 fertility inhibition protein FinO -
PIC84_RS23370 (80853) 80853..81713 - 861 WP_000704513.1 Quorum-quenching protein AidA VF
PIC84_RS23375 (81772) 81772..82518 - 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
PIC84_RS23380 (82538) 82538..87808 - 5271 WP_000986962.1 Multifunctional conjugation protein TraI Relaxase
PIC84_RS23385 (87890) 87890..88117 + 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB -
PIC84_RS23390 (88117) 88117..88515 + 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
PIC84_RS23395 (88524) 88524..90677 - 2154 WP_000009324.1 type IV conjugative transfer system coupling protein TraD -
PIC84_RS23400 (90930) 90930..91661 - 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
PIC84_RS23405 (91693) 91693..92190 - 498 WP_000605857.1 entry exclusion protein -
PIC84_RS23410 (92206) 92206..95028 - 2823 WP_001007018.1 conjugal transfer mating-pair stabilization protein TraG -
PIC84_RS23415 (95025) 95025..96398 - 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
PIC84_RS23420 (96398) 96398..96778 - 381 WP_001389370.1 F-type conjugal transfer protein TrbF -
PIC84_RS23425 (96765) 96765..97106 - 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
PIC84_RS23430 (97036) 97036..97581 - 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
PIC84_RS23435 (97568) 97568..97852 - 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
PIC84_RS23440 (97933) 97933..98247 + 315 WP_001324103.1 hypothetical protein -
PIC84_RS23445 (98249) 98249..98596 - 348 WP_001287910.1 conjugal transfer protein TrbA -
PIC84_RS23450 (98612) 98612..99355 - 744 WP_001030393.1 type-F conjugative transfer system pilin assembly protein TraF -
PIC84_RS23455 (99348) 99348..99605 - 258 WP_000864318.1 conjugal transfer protein TrbE -
PIC84_RS23460 (99632) 99632..101440 - 1809 WP_000821841.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
PIC84_RS23465 (101437) 101437..102075 - 639 WP_000777700.1 type-F conjugative transfer system pilin assembly protein TrbC -
PIC84_RS23470 (102084) 102084..103076 - 993 WP_000830183.1 conjugal transfer pilus assembly protein TraU -
PIC84_RS23475 (103073) 103073..103705 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
PIC84_RS23480 (103702) 103702..104088 - 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
PIC84_RS23485 (104085) 104085..106712 - 2628 WP_001064245.1 type IV secretion system protein TraC -
PIC84_RS23490 (106872) 106872..107093 - 222 WP_001278689.1 conjugal transfer protein TraR -
PIC84_RS23495 (107228) 107228..107743 - 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
PIC84_RS23500 (107740) 107740..107991 - 252 WP_001038342.1 conjugal transfer protein TrbG -
PIC84_RS23505 (108003) 108003..108200 - 198 WP_001324648.1 conjugal transfer protein TrbD -
PIC84_RS23510 (108187) 108187..108777 - 591 WP_001376242.1 conjugal transfer pilus-stabilizing protein TraP -
PIC84_RS23515 (108767) 108767..110194 - 1428 WP_000146685.1 F-type conjugal transfer pilus assembly protein TraB -
PIC84_RS23520 (110194) 110194..110922 - 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
PIC84_RS23525 (110909) 110909..111475 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
PIC84_RS23530 (111497) 111497..111808 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
PIC84_RS23535 (111823) 111823..112188 - 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
PIC84_RS23540 (112221) 112221..112622 - 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
PIC84_RS23545 (112715) 112715..113404 - 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
PIC84_RS23550 (113591) 113591..113974 - 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
PIC84_RS23555 (114295) 114295..114897 + 603 WP_000243712.1 hypothetical protein VF
PIC84_RS23560 (115194) 115194..116015 - 822 WP_001234426.1 DUF932 domain-containing protein -
PIC84_RS23565 (116133) 116133..116420 - 288 WP_000107535.1 hypothetical protein -
PIC84_RS23570 (116445) 116445..116651 - 207 WP_000547968.1 hypothetical protein -
PIC84_RS23575 (116721) 116721..116893 + 173 Protein_129 hypothetical protein -
PIC84_RS23580 (116891) 116891..117121 - 231 WP_071586998.1 hypothetical protein -
PIC84_RS23585 (117341) 117341..117466 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
PIC84_RS23590 (117408) 117408..117557 - 150 Protein_132 plasmid maintenance protein Mok -
- (117543) 117543..117767 - 225 NuclAT_0 - Antitoxin Detail
- (117543) 117543..117767 - 225 NuclAT_0 - Antitoxin Detail
- (117543) 117543..117767 - 225 NuclAT_0 - Antitoxin Detail
- (117543) 117543..117767 - 225 NuclAT_0 - Antitoxin Detail
PIC84_RS23595 (117579) 117579..117767 + 189 WP_001299721.1 hypothetical protein -
PIC84_RS23600 (117736) 117736..118498 - 763 Protein_134 plasmid SOS inhibition protein A -
PIC84_RS23605 (118495) 118495..118929 - 435 WP_000845936.1 conjugation system SOS inhibitor PsiB -
PIC84_RS23610 (118984) 118984..119181 - 198 Protein_136 hypothetical protein -
PIC84_RS23615 (119209) 119209..119442 - 234 WP_000005987.1 DUF905 family protein -
PIC84_RS23620 (119510) 119510..120049 - 540 WP_000290840.1 single-stranded DNA-binding protein -
PIC84_RS23625 (120075) 120075..120281 - 207 WP_000275856.1 hypothetical protein -
PIC84_RS23630 (120351) 120351..120431 + 81 Protein_140 hypothetical protein -
PIC84_RS23635 (120614) 120614..120783 - 170 Protein_141 hypothetical protein -
PIC84_RS23640 (121377) 121377..122348 - 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
PIC84_RS23645 (122348) 122348..123514 - 1167 WP_001238646.1 hypothetical protein VF
PIC84_RS23655 (124996) 124996..127197 - 2202 WP_000973520.1 Ferric aerobactin receptor VF
PIC84_RS23660 (127223) 127223..128556 - 1334 Protein_146 L-lysine N6-monooxygenase VF
PIC84_RS23665 (128553) 128553..130295 - 1743 WP_001015721.1 Aerobactin synthase VF
PIC84_RS23670 (130295) 130295..131242 - 948 WP_000011910.1 N(6)-hydroxylysine O-acetyltransferase VF
PIC84_RS23675 (131243) 131243..132967 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
PIC84_RS23680 (133103) 133103..134296 + 1194 WP_000095526.1 MFS transporter -
PIC84_RS23685 (134676) 134676..135056 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
PIC84_RS23690 (135397) 135397..135810 - 414 Protein_152 phosphopyruvate hydratase -
PIC84_RS23695 (135808) 135808..136065 + 258 Protein_153 Tn3 family transposase -
PIC84_RS23700 (136299) 136299..137156 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
PIC84_RS23705 (137153) 137153..138010 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
PIC84_RS23710 (138007) 138007..138834 - 828 WP_000983710.1 Manganese transport system ATP-binding protein MntB VF
PIC84_RS23715 (138834) 138834..139748 - 915 WP_000949004.1 putative periplasmic iron-binding protein VF
PIC84_RS23720 (140104) 140104..140801 + 698 WP_223155668.1 IS1 family transposase IS1S Transposase
PIC84_RS23725 (140981) 140981..141494 - 514 Protein_159 DUF4113 domain-containing protein -
PIC84_RS23730 (141555) 141555..141659 - 105 Protein_160 AAA family ATPase -
PIC84_RS23735 (141661) 141661..141984 - 324 Protein_161 IS21 family transposase IS21 Transposase
PIC84_RS23740 (142730) 142730..143707 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
PIC84_RS23745 (143992) 143992..144732 - 741 WP_001066954.1 tyrosine-type recombinase/integrase -
PIC84_RS23750 (144853) 144853..145041 - 189 WP_001324033.1 hypothetical protein -
PIC84_RS23760 (145933) 145933..146946 - 1014 Protein_166 SDR family oxidoreductase -
PIC84_RS23765 (147379) 147379..148332 - 954 WP_000280980.1 Protease 7 VF
PIC84_RS23770 (149629) 149629..149808 - 180 Protein_168 integrase core domain-containing protein -
PIC84_RS23775 (149947) 149947..151146 + 1200 Protein_169 IS3 family transposase IS629 Transposase
PIC84_RS23780 (151294) 151294..151619 - 326 Protein_170 IS3 family transposase ISLad1 Transposase
PIC84_RS23785 (151718) 151718..153226 - 1509 WP_001189123.1 group II intron reverse transcriptase/maturase -
PIC84_RS23790 (153925) 153925..154275 + 351 Protein_172 IS3 family transposase -
PIC84_RS23795 (154870) 154870..156057 + 1188 WP_000928804.1 efflux RND transporter periplasmic adaptor subunit -
PIC84_RS23800 (156054) 156054..157994 + 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
PIC84_RS23805 (157998) 157998..159368 + 1371 WP_001312828.1 efflux transporter outer membrane subunit -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance