MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP116042 Location: 3714471..3728444 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain BL708 Replicon: chromosome
Accession: NZ_CP116042 Location: 3714471..3728444 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain BL708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGC28_RS18400 () | 3710042..3712486 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PGC28_RS18405 () | 3712595..3713362 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PGC28_RS18410 () | 3713733..3714140 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PGC28_RS18415 () | 3714471..3715190 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| PGC28_RS18420 () | 3715194..3715409 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PGC28_RS18425 () | 3715526..3716473 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PGC28_RS18430 () | 3716965..3717205 | - | 241 | Protein_3605 | PerC family transcriptional regulator | - |
| PGC28_RS18435 () | 3717288..3718109 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| PGC28_RS18440 () | 3718515..3718985 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| PGC28_RS18445 () | 3719007..3721517 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| PGC28_RS18450 () | 3721541..3722278 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| PGC28_RS18455 () | 3722362..3722874 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| PGC28_RS18460 () | 3723624..3724328 | - | 705 | Protein_3611 | integrase core domain-containing protein | - |
| PGC28_RS18465 () | 3724381..3724629 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PGC28_RS18470 () | 3724731..3725039 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| PGC28_RS18475 () | 3725122..3725238 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3725323..3725745 | - | 423 | - | - | Antitoxin Detail |
| PGC28_RS18480 () | 3725480..3725755 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| PGC28_RS18485 () | 3725808..3726245 | - | 438 | WP_283491042.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PGC28_RS18490 () | 3726808..3727254 | - | 447 | WP_000935097.1 | protein SciX | - |
| PGC28_RS18495 () | 3727248..3728117 | - | 870 | Protein_3618 | hypothetical protein | VF |
| PGC28_RS18500 () | 3728181..3728444 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| PGC28_RS18505 () | 3728438..3732532 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| PGC28_RS18510 () | 3732551..3732997 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |