MGE detailed information
MGE type: Prophage MGE length: 28934 bp
Accession: NZ_CP114894 Location: 756051..784984 Organism: Escherichia coli strain CM19 Replicon: chromosome
Accession: NZ_CP114894 Location: 756051..784984 Organism: Escherichia coli strain CM19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6X69_RS03770 (751557) | 751557..753083 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| O6X69_RS03775 (753120) | 753120..754565 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| O6X69_RS03780 (754565) | 754565..755875 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| O6X69_RS03785 (756051) | 756051..756959 | + | 909 | WP_000885458.1 | LysR family transcriptional regulator | - |
| O6X69_RS03790 (757289) | 757289..757852 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| O6X69_RS03795 (757873) | 757873..759105 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| O6X69_RS03800 (759299) | 759299..759346 | + | 48 | WP_211180494.1 | protein YnaN | - |
| O6X69_RS03805 (759360) | 759360..760343 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| O6X69_RS03810 (760618) | 760618..760791 | + | 174 | WP_001296046.1 | protein YnaL | - |
| O6X69_RS03815 (760821) | 760821..762194 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| O6X69_RS03820 (762323) | 762323..763258 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| O6X69_RS03825 (763310) | 763310..764545 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| O6X69_RS03830 (764547) | 764547..764762 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (764866) | 764866..765044 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (764866) | 764866..765044 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (764866) | 764866..765044 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (764866) | 764866..765044 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| O6X69_RS03835 (764841) | 764841..765050 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| O6X69_RS03840 (765043) | 765043..765237 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| O6X69_RS03845 (765294) | 765294..766103 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| O6X69_RS03850 (766096) | 766096..768696 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| O6X69_RS03855 (768798) | 768798..769073 | - | 276 | WP_000632297.1 | protein RacC | - |
| O6X69_RS03860 (769148) | 769148..769318 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| O6X69_RS03865 (769318) | 769318..769539 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| O6X69_RS03870 (769981) | 769981..770469 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| O6X69_RS03875 (770466) | 770466..770621 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| O6X69_RS03880 (770632) | 770632..770766 | - | 135 | WP_000233809.1 | phage protein | - |
| O6X69_RS03885 (771075) | 771075..771551 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| O6X69_RS03890 (771675) | 771675..771971 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| O6X69_RS03895 (771994) | 771994..772416 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| O6X69_RS03900 (772429) | 772429..773286 | + | 858 | WP_000899748.1 | YdaU family protein | - |
| O6X69_RS03905 (773293) | 773293..774039 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| O6X69_RS03910 (774062) | 774062..774514 | + | 453 | Protein_754 | DUF1627 domain-containing protein | - |
| O6X69_RS03915 (774710) | 774710..774895 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| O6X69_RS03920 (775092) | 775092..776549 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| O6X69_RS03925 (776687) | 776687..776950 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| O6X69_RS03930 (776931) | 776931..777290 | + | 360 | WP_000091628.1 | protein YdaY | - |
| O6X69_RS03935 (777764) | 777764..778696 | + | 933 | Protein_759 | phage tail length tape measure family protein | - |
| O6X69_RS03940 (778699) | 778699..778914 | + | 216 | Protein_760 | Ail/Lom family outer membrane beta-barrel protein | - |
| O6X69_RS03945 (779056) | 779056..780036 | - | 981 | WP_000019451.1 | IS5 family transposase ISKpn26 | Transposase |
| O6X69_RS03950 (780106) | 780106..780294 | + | 189 | Protein_762 | Ail/Lom family outer membrane beta-barrel protein | - |
| O6X69_RS03955 (780359) | 780359..783721 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| O6X69_RS03960 (783721) | 783721..784296 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| O6X69_RS03965 (784394) | 784394..784984 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| O6X69_RS03970 (785301) | 785301..785534 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| O6X69_RS03975 (785725) | 785725..786705 | + | 981 | WP_000019403.1 | IS5-like element IS5 family transposase | - |
| O6X69_RS03980 (786838) | 786838..786915 | - | 78 | Protein_768 | hypothetical protein | - |
| O6X69_RS03985 (787694) | 787694..788128 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| O6X69_RS03990 (788269) | 788269..789402 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0.008 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0.008 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0.008 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0.008 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0.008 |