MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_CP114892 Location: 629780..651454 Organism: Escherichia coli strain CM5 Replicon: chromosome
Accession: NZ_CP114892 Location: 629780..651454 Organism: Escherichia coli strain CM5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6Q95_RS03135 (625769) | 625769..625816 | + | 48 | WP_211180494.1 | protein YnaN | - |
| O6Q95_RS03140 (625830) | 625830..626813 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| O6Q95_RS03145 (627088) | 627088..627261 | + | 174 | WP_001296046.1 | protein YnaL | - |
| O6Q95_RS03150 (627291) | 627291..628664 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| O6Q95_RS03155 (628793) | 628793..629728 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| O6Q95_RS03160 (629780) | 629780..631015 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| O6Q95_RS03165 (631017) | 631017..631232 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (631336) | 631336..631514 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (631336) | 631336..631514 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (631336) | 631336..631514 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (631336) | 631336..631514 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| O6Q95_RS03170 (631311) | 631311..631520 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| O6Q95_RS03175 (631513) | 631513..631707 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| O6Q95_RS03180 (631764) | 631764..632573 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| O6Q95_RS03185 (632566) | 632566..635166 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| O6Q95_RS03190 (635268) | 635268..635543 | - | 276 | WP_000632297.1 | protein RacC | - |
| O6Q95_RS03195 (635618) | 635618..635788 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| O6Q95_RS03200 (635788) | 635788..636009 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| O6Q95_RS03205 (636451) | 636451..636939 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| O6Q95_RS03210 (636936) | 636936..637091 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| O6Q95_RS03215 (637102) | 637102..637236 | - | 135 | WP_000233809.1 | phage protein | - |
| O6Q95_RS03220 (637545) | 637545..638021 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| O6Q95_RS03225 (638145) | 638145..638441 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| O6Q95_RS03230 (638464) | 638464..638886 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| O6Q95_RS03235 (638899) | 638899..639756 | + | 858 | WP_000899748.1 | YdaU family protein | - |
| O6Q95_RS03240 (639763) | 639763..640509 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| O6Q95_RS03245 (640532) | 640532..640984 | + | 453 | Protein_636 | DUF1627 domain-containing protein | - |
| O6Q95_RS03250 (641180) | 641180..641365 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| O6Q95_RS03255 (641562) | 641562..643019 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| O6Q95_RS03260 (643157) | 643157..643420 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| O6Q95_RS03265 (643401) | 643401..643760 | + | 360 | WP_000091628.1 | protein YdaY | - |
| O6Q95_RS03270 (644234) | 644234..645166 | + | 933 | Protein_641 | phage tail length tape measure family protein | - |
| O6Q95_RS03275 (645169) | 645169..645384 | + | 216 | Protein_642 | Ail/Lom family outer membrane beta-barrel protein | - |
| O6Q95_RS03280 (645526) | 645526..646506 | - | 981 | WP_000019451.1 | IS5 family transposase ISKpn26 | Transposase |
| O6Q95_RS03285 (646576) | 646576..646764 | + | 189 | Protein_644 | Ail/Lom family outer membrane beta-barrel protein | - |
| O6Q95_RS03290 (646829) | 646829..650191 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| O6Q95_RS03295 (650191) | 650191..650766 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| O6Q95_RS03300 (650864) | 650864..651454 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| O6Q95_RS03305 (651771) | 651771..652004 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| O6Q95_RS03310 (652195) | 652195..653175 | + | 981 | WP_000019403.1 | IS5-like element IS5 family transposase | - |
| O6Q95_RS03315 (653308) | 653308..653385 | - | 78 | Protein_650 | hypothetical protein | - |
| O6Q95_RS03320 (654164) | 654164..654598 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| O6Q95_RS03325 (654739) | 654739..655872 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |