MGE detailed information
MGE type: Prophage MGE length: 7378 bp
Accession: NZ_CP113538 Location: 344992..352369 Organism: Salmonella enterica strain XSK Replicon: chromosome
Accession: NZ_CP113538 Location: 344992..352369 Organism: Salmonella enterica strain XSK Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV06_RS01540 (340709) | 340709..340843 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| OXV06_RS01545 (340821) | 340821..341204 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| OXV06_RS01550 (341626) | 341626..342735 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| OXV06_RS01555 (342795) | 342795..343721 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| OXV06_RS01560 (343718) | 343718..344995 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| OXV06_RS01565 (344992) | 344992..345759 | + | 768 | WP_000082083.1 | HTH-type transcriptional regulator MurR | VF |
| OXV06_RS01570 (345761) | 345761..346474 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| OXV06_RS01575 (346606) | 346606..346827 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OXV06_RS01580 (346824) | 346824..347192 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| OXV06_RS01585 (347451) | 347451..348767 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| OXV06_RS01590 (348831) | 348831..349718 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| OXV06_RS01595 (349715) | 349715..350560 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| OXV06_RS01600 (350562) | 350562..351632 | + | 1071 | WP_000907838.1 | hypothetical protein | VF |
| OXV06_RS01605 (351629) | 351629..352369 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| OXV06_RS01610 (352382) | 352382..352798 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| OXV06_RS01615 (352924) | 352924..354666 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| OXV06_RS01620 (354711) | 354711..355745 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| OXV06_RS01625 (355742) | 355742..356713 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.004 |