MGE detailed information
MGE type: Prophage MGE length: 54526 bp
Accession: NZ_CP113535 Location: 2121910..2176435 Organism: Salmonella enterica strain ZLQ Replicon: chromosome
Accession: NZ_CP113535 Location: 2121910..2176435 Organism: Salmonella enterica strain ZLQ Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV11_RS10370 () | 2116966..2117418 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| OXV11_RS10375 () | 2117448..2118188 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| OXV11_RS10380 () | 2118225..2118746 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| OXV11_RS10385 () | 2118748..2119347 | - | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| OXV11_RS10390 () | 2119974..2120870 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| OXV11_RS10395 () | 2121290..2121901 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| OXV11_RS10400 () | 2121910..2122920 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| OXV11_RS10405 () | 2122999..2123784 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| OXV11_RS10410 () | 2123781..2124536 | - | 756 | WP_000203014.1 | hypothetical protein | VF |
| OXV11_RS10415 () | 2124615..2125559 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| OXV11_RS10420 () | 2125575..2126894 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| OXV11_RS10425 () | 2127011..2127982 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| OXV11_RS10430 () | 2128055..2129497 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| OXV11_RS10435 () | 2129621..2130490 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| OXV11_RS10440 () | 2130832..2132307 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| OXV11_RS10445 () | 2132542..2134353 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| OXV11_RS10450 () | 2134391..2135032 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| OXV11_RS10455 () | 2135132..2136310 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OXV11_RS10460 () | 2136441..2136731 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| OXV11_RS10465 () | 2136799..2137152 | + | 354 | WP_001042119.1 | protein YebF | - |
| OXV11_RS10470 () | 2137246..2137905 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| OXV11_RS10475 () | 2138118..2140169 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| OXV11_RS10480 () | 2140204..2140902 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| OXV11_RS10485 () | 2140926..2141582 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| OXV11_RS10490 () | 2141690..2141920 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| OXV11_RS10495 () | 2142058..2142432 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| OXV11_RS10500 () | 2142433..2143308 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| OXV11_RS10505 () | 2143325..2143678 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2143778..2143923 | - | 146 | - | - | Antitoxin Detail |
| - | 2143818..2143921 | + | 104 | - | - | Toxin Detail |
| OXV11_RS10510 () | 2144052..2144975 | - | 924 | Protein_2057 | hypothetical protein ; Integrase | Integrase |
| OXV11_RS10515 () | 2145239..2145700 | - | 462 | Protein_2058 | DNA breaking-rejoining protein | - |
| OXV11_RS10520 () | 2145689..2145880 | + | 192 | Protein_2059 | glycoside hydrolase family 19 protein | - |
| OXV11_RS10525 () | 2145934..2146467 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| OXV11_RS10530 () | 2146724..2146891 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| OXV11_RS10535 () | 2146956..2147144 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| OXV11_RS10540 () | 2147199..2147459 | + | 261 | Protein_2063 | DUF1441 family protein | - |
| OXV11_RS10545 () | 2147461..2147676 | + | 216 | Protein_2064 | shikimate transporter | - |
| OXV11_RS10550 () | 2147674..2148018 | + | 345 | Protein_2065 | macro domain-containing protein | - |
| OXV11_RS10555 () | 2148028..2148498 | + | 471 | Protein_2066 | tail fiber assembly protein | - |
| OXV11_RS10560 () | 2148595..2148795 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| OXV11_RS10565 () | 2149185..2149365 | - | 181 | Protein_2068 | IS3 family transposase | - |
| OXV11_RS10570 () | 2149365..2149490 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| OXV11_RS10575 () | 2150079..2150311 | + | 233 | Protein_2070 | helix-turn-helix domain-containing protein | - |
| OXV11_RS10580 () | 2150638..2151252 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| OXV11_RS10585 () | 2151262..2151420 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| OXV11_RS10590 () | 2151553..2152467 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| OXV11_RS10595 () | 2153780..2154202 | - | 423 | Protein_2074 | hypothetical protein ; Integrase | Integrase |
| OXV11_RS10600 () | 2154272..2155466 | + | 1195 | Protein_2075 | IS256 family transposase IS285 | Transposase |
| OXV11_RS10605 () | 2155612..2155752 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| OXV11_RS10610 () | 2155918..2156187 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| OXV11_RS10615 () | 2156557..2156976 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| OXV11_RS10620 () | 2157364..2157840 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| OXV11_RS10625 () | 2158170..2158565 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| OXV11_RS10630 () | 2159248..2159970 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| OXV11_RS10635 () | 2160255..2160419 | + | 165 | WP_001134856.1 | membrane protein | - |
| OXV11_RS10640 () | 2160643..2161293 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| OXV11_RS10645 () | 2161312..2161503 | - | 192 | WP_000457836.1 | YebW family protein | - |
| OXV11_RS10650 () | 2161614..2161850 | - | 237 | WP_024131108.1 | YebV family protein | - |
| OXV11_RS10655 () | 2161968..2163407 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OXV11_RS10660 () | 2163485..2166118 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| OXV11_RS10665 () | 2166087..2167370 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| OXV11_RS10670 () | 2167499..2167996 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| OXV11_RS10675 () | 2168094..2168780 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| OXV11_RS10680 () | 2168800..2170848 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| OXV11_RS10685 () | 2171042..2171923 | + | 882 | WP_000984498.1 | protease HtpX | - |
| OXV11_RS10690 () | 2171971..2173344 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| OXV11_RS10695 () | 2173520..2174311 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| OXV11_RS10700 () | 2174523..2174762 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| OXV11_RS10705 () | 2174920..2175063 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| OXV11_RS10710 () | 2175134..2175421 | + | 288 | WP_001000660.1 | YebO family protein | - |
| OXV11_RS10715 () | 2176070..2176213 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| OXV11_RS10720 () | 2176226..2176435 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| OXV11_RS10725 () | 2176655..2178400 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| OXV11_RS10730 () | 2178466..2179275 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| OXV11_RS10735 () | 2179272..2179838 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| OXV11_RS10740 () | 2180248..2180706 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.009 |